RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 DHRS4-AS1Q9P1J3 65 aa4.57□□□□□ -1.68
SPG11-204ENST00000557866 LCE6AA0A183 80 aa4.56□□□□□ -1.68
SPG11-204ENST00000557866 H3BQ85 93 aa4.56□□□□□ -1.68
SPG11-204ENST00000557866 UBE2BP63146 152 aa4.56□□□□□ -1.68
SPG11-204ENST00000557866 ST20-AS1Q8NBB2 130 aa4.56□□□□□ -1.68
SPG11-204ENST00000557866 DPH3Q96FX2 82 aa4.56□□□□□ -1.68
SPG11-204ENST00000557866 PRLHP81277 87 aa4.55□□□□□ -1.68
SPG11-204ENST00000557866 FAM19A1Q7Z5A9 133 aa4.55□□□□□ -1.68
SPG11-204ENST00000557866 RYR2Q92736 4967 aa4.55□□□□□ -1.68
SPG11-204ENST00000557866 LRP1BQ9NZR2 4599 aa4.55□□□□□ -1.68
SPG11-204ENST00000557866 IGLV5-48A0A075B6I7 105 aa4.54□□□□□ -1.68
SPG11-204ENST00000557866 FAM240AA0A1B0GVK7 77 aa4.54□□□□□ -1.68
SPG11-204ENST00000557866 JMJD7-PLA2G4BH0Y9G9 81 aa4.54□□□□□ -1.68
SPG11-204ENST00000557866 NDUFV3P56181 108 aaKnown RBP4.54□□□□□ -1.68
SPG11-204ENST00000557866 KRTAP10-1P60331 282 aa4.54□□□□□ -1.68
SPG11-204ENST00000557866 KRTAP13-1Q8IUC0 172 aa4.54□□□□□ -1.68
SPG11-204ENST00000557866 Q8N9P0 234 aaPredicted RBP4.54□□□□□ -1.68
SPG11-204ENST00000557866 DEFB105AQ8NG35 78 aa4.54□□□□□ -1.68
SPG11-204ENST00000557866 LAMTOR3Q9UHA4 124 aa4.54□□□□□ -1.68
SPG11-204ENST00000557866 DYNC1H1Q14204 4646 aaKnown RBP4.53□□□□□ -1.68
SPG11-204ENST00000557866 KRTAP29-1A8MX34 341 aaPredicted RBP4.53□□□□□ -1.68
SPG11-204ENST00000557866 H0Y9J4 135 aa4.53□□□□□ -1.68
SPG11-204ENST00000557866 BCE1O60756 84 aa4.53□□□□□ -1.68
SPG11-204ENST00000557866 CCKP06307 115 aa4.53□□□□□ -1.68
SPG11-204ENST00000557866 RBM3P98179 157 aaKnown RBP4.53□□□□□ -1.68
SPG11-204ENST00000557866 GAGE2AQ6NT46 116 aa4.53□□□□□ -1.68
SPG11-204ENST00000557866 LOC110117498A0A087WWA1 95 aa4.52□□□□□ -1.69
SPG11-204ENST00000557866 MT-ATP8P03928 68 aa4.52□□□□□ -1.69
SPG11-204ENST00000557866 XGP55808 180 aa4.52□□□□□ -1.69
SPG11-204ENST00000557866 Q6ZQT0 140 aa4.52□□□□□ -1.69
SPG11-204ENST00000557866 Q6ZSA8 131 aa4.52□□□□□ -1.69
SPG11-204ENST00000557866 SMIM29Q86T20 159 aa4.52□□□□□ -1.69
SPG11-204ENST00000557866 KMT2CQ8NEZ4 4911 aaKnown RBP4.52□□□□□ -1.69
SPG11-204ENST00000557866 TRBV7-4A0A0J9YYF1 115 aa4.51□□□□□ -1.69
SPG11-204ENST00000557866 ACYP1P07311 99 aa4.51□□□□□ -1.69
SPG11-204ENST00000557866 UBE2AP49459 152 aa4.51□□□□□ -1.69
SPG11-204ENST00000557866 C3orf22Q8N5N4 141 aa4.51□□□□□ -1.69
SPG11-204ENST00000557866 CIRBP-AS1Q8TBR5 109 aa4.51□□□□□ -1.69
SPG11-204ENST00000557866 SIGMAR1Q99720 223 aa4.51□□□□□ -1.69
SPG11-204ENST00000557866 HIGD2AQ9BW72 106 aa4.51□□□□□ -1.69
SPG11-204ENST00000557866 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
SPG11-204ENST00000557866 PKHD1P08F94 4074 aa4.51□□□□□ -1.69
SPG11-204ENST00000557866 LINC00846Q9NV44 126 aa4.5□□□□□ -1.69
SPG11-204ENST00000557866 A0A1B0GVY2 172 aa4.49□□□□□ -1.69
SPG11-204ENST00000557866 HAMPP81172 84 aa4.49□□□□□ -1.69
SPG11-204ENST00000557866 SCXQ7RTU7 201 aa4.49□□□□□ -1.69
SPG11-204ENST00000557866 DSCR8Q96T75 97 aa4.49□□□□□ -1.69
SPG11-204ENST00000557866 SPRR1BP22528 89 aa4.48□□□□□ -1.69
SPG11-204ENST00000557866 C1orf137Q5JT78 98 aa4.48□□□□□ -1.69
SPG11-204ENST00000557866 LCE1AQ5T7P2 110 aa4.48□□□□□ -1.69
SPG11-204ENST00000557866 VPS13BQ7Z7G8 4022 aa4.47□□□□□ -1.69
SPG11-204ENST00000557866 PDE6GP18545 87 aa4.47□□□□□ -1.69
SPG11-204ENST00000557866 LINC00336Q6ZUF6 198 aa4.47□□□□□ -1.69
SPG11-204ENST00000557866 A0A0G2JQZ4 141 aa4.46□□□□□ -1.7
SPG11-204ENST00000557866 A0A1W2PNM2 257 aa4.46□□□□□ -1.7
SPG11-204ENST00000557866 ZNF861PO60384 105 aa4.46□□□□□ -1.7
SPG11-204ENST00000557866 IGKV2-30P06310 120 aa4.46□□□□□ -1.7
SPG11-204ENST00000557866 LINC00643Q86TS7 51 aa4.46□□□□□ -1.7
SPG11-204ENST00000557866 APOBP04114 4563 aaKnown RBP4.46□□□□□ -1.7
SPG11-204ENST00000557866 SRRM2Q9UQ35 2752 aaKnown RBP4.45□□□□□ -1.7
SPG11-204ENST00000557866 IGLV8-61A0A075B6I0 122 aa4.45□□□□□ -1.7
SPG11-204ENST00000557866 IGLV7-43P04211 117 aa4.45□□□□□ -1.7
SPG11-204ENST00000557866 SPRR4Q96PI1 79 aa4.45□□□□□ -1.7
SPG11-204ENST00000557866 LINC00483Q53H64 154 aa4.44□□□□□ -1.7
SPG11-204ENST00000557866 IGKV3D-7A0A0C4DH55 119 aa4.43□□□□□ -1.7
SPG11-204ENST00000557866 Q6JHZ5 121 aa4.43□□□□□ -1.7
SPG11-204ENST00000557866 IGFL1Q6UW32 110 aa4.43□□□□□ -1.7
SPG11-204ENST00000557866 Q8NBF4 154 aa4.43□□□□□ -1.7
SPG11-204ENST00000557866 RYR3Q15413 4870 aa4.42□□□□□ -1.7
SPG11-204ENST00000557866 TRBV7-7A0A0K0K1E9 115 aa4.42□□□□□ -1.7
SPG11-204ENST00000557866 Q6ZVQ6 151 aa4.42□□□□□ -1.7
SPG11-204ENST00000557866 ANAPC11Q9NYG5 84 aa4.42□□□□□ -1.7
SPG11-204ENST00000557866 F8WEM9 126 aa4.41□□□□□ -1.7
SPG11-204ENST00000557866 Q6Q795 121 aa4.41□□□□□ -1.7
SPG11-204ENST00000557866 UBL5Q9BZL1 73 aa4.41□□□□□ -1.7
SPG11-204ENST00000557866 FAT1Q14517 4588 aa4.4□□□□□ -1.7
SPG11-204ENST00000557866 SCGB1A1P11684 91 aa4.4□□□□□ -1.71
SPG11-204ENST00000557866 CRYGAP11844 174 aa4.4□□□□□ -1.71
SPG11-204ENST00000557866 ZNF706Q9Y5V0 76 aaPredicted RBP4.4□□□□□ -1.71
SPG11-204ENST00000557866 IMUPQ9GZP8 106 aa4.39□□□□□ -1.71
SPG11-204ENST00000557866 IGLV9-49A0A0B4J1Y8 123 aa4.38□□□□□ -1.71
SPG11-204ENST00000557866 A0A1B0GW54 56 aa4.38□□□□□ -1.71
SPG11-204ENST00000557866 ATP5EP2Q5VTU8 51 aa4.38□□□□□ -1.71
SPG11-204ENST00000557866 NREPQ16612 68 aa4.37□□□□□ -1.71
SPG11-204ENST00000557866 A0A087WVE0 104 aa4.36□□□□□ -1.71
SPG11-204ENST00000557866 SMR3BP02814 79 aaPredicted RBP4.36□□□□□ -1.71
SPG11-204ENST00000557866 PCP4P48539 62 aa4.36□□□□□ -1.71
SPG11-204ENST00000557866 CXCL6P80162 114 aa4.36□□□□□ -1.71
SPG11-204ENST00000557866 MOBPQ13875 183 aa4.36□□□□□ -1.71
SPG11-204ENST00000557866 C9orf153Q5TBE3 101 aa4.36□□□□□ -1.71
SPG11-204ENST00000557866 HSPG2P98160 4391 aa4.35□□□□□ -1.71
SPG11-204ENST00000557866 A0A087WSZ3 146 aa4.35□□□□□ -1.71
SPG11-204ENST00000557866 KRTAP1-4P0C5Y4 121 aa4.35□□□□□ -1.71
SPG11-204ENST00000557866 KRTAP10-4P60372 401 aaPredicted RBP4.35□□□□□ -1.71
SPG11-204ENST00000557866 RPL37AP61513 92 aaKnown RBP4.35□□□□□ -1.71
SPG11-204ENST00000557866 HIST1H4AP62805 103 aaKnown RBP4.35□□□□□ -1.71
SPG11-204ENST00000557866 PKHD1L1Q86WI1 4243 aa4.35□□□□□ -1.71
SPG11-204ENST00000557866 A0A087X002 238 aa4.34□□□□□ -1.71
SPG11-204ENST00000557866 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
SPG11-204ENST00000557866 FAM236AA0A1B0GUQ0 79 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms