RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 COPS9Q8WXC6 57 aa9.16□□□□□ -0.94
ABCD4-228ENST00000557588 LINC00846Q9NV44 126 aa9.16□□□□□ -0.94
ABCD4-228ENST00000557588 KRTAP19-6Q3LI70 58 aa9.15□□□□□ -0.94
ABCD4-228ENST00000557588 TRAV13-2A0A0B4J235 113 aa9.14□□□□□ -0.95
ABCD4-228ENST00000557588 SMIM11BQ8TCY0 68 aa9.14□□□□□ -0.95
ABCD4-228ENST00000557588 LST1O00453 97 aa9.13□□□□□ -0.95
ABCD4-228ENST00000557588 IFITM1P13164 125 aa9.13□□□□□ -0.95
ABCD4-228ENST00000557588 LINC01545Q5VT33 79 aa9.13□□□□□ -0.95
ABCD4-228ENST00000557588 FAM236DA0A1B0GTK5 79 aa9.12□□□□□ -0.95
ABCD4-228ENST00000557588 FAM236CP0DP71 79 aa9.12□□□□□ -0.95
ABCD4-228ENST00000557588 SCGB1D4Q6XE38 83 aa9.11□□□□□ -0.95
ABCD4-228ENST00000557588 OCIAD2Q56VL3 154 aa9.1□□□□□ -0.95
ABCD4-228ENST00000557588 Q6ZQY7 126 aa9.1□□□□□ -0.95
ABCD4-228ENST00000557588 SLC7A5P1Q8MH63 180 aa9.1□□□□□ -0.95
ABCD4-228ENST00000557588 LINC00575Q6W349 94 aa9.09□□□□□ -0.95
ABCD4-228ENST00000557588 Q6ZVH6 145 aa9.09□□□□□ -0.95
ABCD4-228ENST00000557588 MPLKIPQ8TAP9 179 aa9.08□□□□□ -0.96
ABCD4-228ENST00000557588 KRTAP6-3Q3LI67 103 aa9.07□□□□□ -0.96
ABCD4-228ENST00000557588 PET117Q6UWS5 81 aa9.06□□□□□ -0.96
ABCD4-228ENST00000557588 MUSTN1Q8IVN3 82 aa9.06□□□□□ -0.96
ABCD4-228ENST00000557588 SS18L2Q9UHA2 77 aa9.05□□□□□ -0.96
ABCD4-228ENST00000557588 hADV29S1A0JD25 119 aa9.04□□□□□ -0.96
ABCD4-228ENST00000557588 VAMP3Q15836 100 aa9.04□□□□□ -0.96
ABCD4-228ENST00000557588 KRTAP16-1A8MUX0 517 aa9.03□□□□□ -0.96
ABCD4-228ENST00000557588 HRES1P13985 223 aa9.03□□□□□ -0.96
ABCD4-228ENST00000557588 RBM12B-AS1Q9P1G2 102 aa9.03□□□□□ -0.96
ABCD4-228ENST00000557588 PPDPFLQ8WWR9 84 aa9.01□□□□□ -0.97
ABCD4-228ENST00000557588 H3BUT2 72 aa8.99□□□□□ -0.97
ABCD4-228ENST00000557588 SCGB1D1O95968 90 aa8.99□□□□□ -0.97
ABCD4-228ENST00000557588 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.99□□□□□ -0.97
ABCD4-228ENST00000557588 DSCR10P59022 87 aa8.98□□□□□ -0.97
ABCD4-228ENST00000557588 ANKRD39Q53RE8 183 aa8.97□□□□□ -0.97
ABCD4-228ENST00000557588 NEBP20929 6669 aa8.95□□□□□ -0.98
ABCD4-228ENST00000557588 C3orf79P0CE67 100 aa8.95□□□□□ -0.98
ABCD4-228ENST00000557588 SNHG12Q9BXW3 62 aa8.95□□□□□ -0.98
ABCD4-228ENST00000557588 COLCA2A8K830 154 aa8.94□□□□□ -0.98
ABCD4-228ENST00000557588 TEN1Q86WV5 123 aa8.93□□□□□ -0.98
ABCD4-228ENST00000557588 NOTCH2NLQ7Z3S9 236 aa8.92□□□□□ -0.98
ABCD4-228ENST00000557588 A0A087WSZ3 146 aa8.91□□□□□ -0.98
ABCD4-228ENST00000557588 HIST1H2BKO60814 126 aa8.91□□□□□ -0.98
ABCD4-228ENST00000557588 HIST1H2BJP06899 126 aa8.91□□□□□ -0.98
ABCD4-228ENST00000557588 HIST1H2BOP23527 126 aa8.91□□□□□ -0.98
ABCD4-228ENST00000557588 HIST1H2BBP33778 126 aa8.91□□□□□ -0.98
ABCD4-228ENST00000557588 HIST1H2BDP58876 126 aa8.91□□□□□ -0.98
ABCD4-228ENST00000557588 HIST1H2BCP62807 126 aa8.91□□□□□ -0.98
ABCD4-228ENST00000557588 HIST2H2BEQ16778 126 aa8.91□□□□□ -0.98
ABCD4-228ENST00000557588 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.91□□□□□ -0.98
ABCD4-228ENST00000557588 HIST1H2BHQ93079 126 aa8.91□□□□□ -0.98
ABCD4-228ENST00000557588 HIST1H2BNQ99877 126 aa8.91□□□□□ -0.98
ABCD4-228ENST00000557588 HIST1H2BMQ99879 126 aa8.91□□□□□ -0.98
ABCD4-228ENST00000557588 SIGMAR1Q99720 223 aa8.88□□□□□ -0.99
ABCD4-228ENST00000557588 KRTDAPP60985 99 aa8.87□□□□□ -0.99
ABCD4-228ENST00000557588 LINC00313P59037 77 aa8.86□□□□□ -0.99
ABCD4-228ENST00000557588 BVES-AS1Q5T3Y7 98 aa8.85□□□□□ -0.99
ABCD4-228ENST00000557588 MTURNQ8N3F0 131 aa8.85□□□□□ -0.99
ABCD4-228ENST00000557588 ATOH7Q8N100 152 aa8.84□□□□□ -0.99
ABCD4-228ENST00000557588 A8MWP4 228 aa8.81□□□□□ -1
ABCD4-228ENST00000557588 NDUFV3P56181 108 aaKnown RBP8.79□□□□□ -1
ABCD4-228ENST00000557588 C12orf57Q99622 126 aa8.79□□□□□ -1
ABCD4-228ENST00000557588 MUC12Q9UKN1 5478 aa8.78□□□□□ -1
ABCD4-228ENST00000557588 Q8N9P0 234 aaPredicted RBP8.77□□□□□ -1.01
ABCD4-228ENST00000557588 IGKV4-1P06312 121 aa8.76□□□□□ -1.01
ABCD4-228ENST00000557588 COA6Q5JTJ3 125 aaKnown RBP8.76□□□□□ -1.01
ABCD4-228ENST00000557588 SNRPEP62304 92 aaKnown RBP8.75□□□□□ -1.01
ABCD4-228ENST00000557588 A0A1W2PNM2 257 aa8.73□□□□□ -1.01
ABCD4-228ENST00000557588 H3BMG7 143 aa8.73□□□□□ -1.01
ABCD4-228ENST00000557588 SNCGO76070 127 aa8.69□□□□□ -1.02
ABCD4-228ENST00000557588 SPINK7P58062 85 aa8.68□□□□□ -1.02
ABCD4-228ENST00000557588 FAM218AQ96MZ4 157 aa8.68□□□□□ -1.02
ABCD4-228ENST00000557588 IGHV6-1A0A0B4J1U7 121 aa8.67□□□□□ -1.02
ABCD4-228ENST00000557588 KRTAP20-1Q3LI63 56 aa8.67□□□□□ -1.02
ABCD4-228ENST00000557588 ZCCHC13Q8WW36 166 aaKnown RBP8.66□□□□□ -1.02
ABCD4-228ENST00000557588 LINC00472Q9H8W2 130 aa8.66□□□□□ -1.02
ABCD4-228ENST00000557588 TRBV7-4A0A0J9YYF1 115 aa8.65□□□□□ -1.02
ABCD4-228ENST00000557588 H0YGX0 51 aa8.65□□□□□ -1.02
ABCD4-228ENST00000557588 DEFB116Q30KQ4 102 aa8.64□□□□□ -1.03
ABCD4-228ENST00000557588 GHRHP01286 108 aa8.63□□□□□ -1.03
ABCD4-228ENST00000557588 C8orf87E5RJ46 101 aa8.62□□□□□ -1.03
ABCD4-228ENST00000557588 FABP2P12104 132 aa8.62□□□□□ -1.03
ABCD4-228ENST00000557588 WFDC13Q8IUB5 93 aa8.61□□□□□ -1.03
ABCD4-228ENST00000557588 RAB37Q96AX2 223 aa8.61□□□□□ -1.03
ABCD4-228ENST00000557588 HIST1H4GQ99525 98 aa8.61□□□□□ -1.03
ABCD4-228ENST00000557588 A0A1B0GX51 115 aa8.59□□□□□ -1.03
ABCD4-228ENST00000557588 A0A1B0GVX0 72 aa8.58□□□□□ -1.04
ABCD4-228ENST00000557588 HSBP1L1C9JCN9 74 aa8.58□□□□□ -1.04
ABCD4-228ENST00000557588 ANKRD29Q8N6D5 301 aa8.58□□□□□ -1.04
ABCD4-228ENST00000557588 A0A0B4J2C4 111 aa8.54□□□□□ -1.04
ABCD4-228ENST00000557588 TRACP01848 142 aa8.52□□□□□ -1.05
ABCD4-228ENST00000557588 A0A1B0GV72 72 aa8.51□□□□□ -1.05
ABCD4-228ENST00000557588 CCKP06307 115 aa8.51□□□□□ -1.05
ABCD4-228ENST00000557588 A6NN06 94 aa8.49□□□□□ -1.05
ABCD4-228ENST00000557588 COX8AP10176 69 aa8.46□□□□□ -1.06
ABCD4-228ENST00000557588 MDN1Q9NU22 5596 aa8.45□□□□□ -1.06
ABCD4-228ENST00000557588 KRTAP5-9P26371 169 aa8.45□□□□□ -1.06
ABCD4-228ENST00000557588 HIST1H2BLQ99880 126 aa8.45□□□□□ -1.06
ABCD4-228ENST00000557588 H3BQ85 93 aa8.44□□□□□ -1.06
ABCD4-228ENST00000557588 H1FX-AS1Q4G0G2 97 aa8.44□□□□□ -1.06
ABCD4-228ENST00000557588 ORMDL1Q9P0S3 153 aa8.44□□□□□ -1.06
ABCD4-228ENST00000557588 KMT2DO14686 5537 aa8.43□□□□□ -1.06
ABCD4-228ENST00000557588 DLEU1O43261 78 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms