RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 F8WEM9 126 aa8.71□□□□□ -1.02
ARHGEF40-208ENST00000557498 KRTAP10-4P60372 401 aaPredicted RBP8.7□□□□□ -1.02
ARHGEF40-208ENST00000557498 LOC110117498A0A087WWA1 95 aa8.69□□□□□ -1.02
ARHGEF40-208ENST00000557498 SPINK6Q6UWN8 80 aa8.69□□□□□ -1.02
ARHGEF40-208ENST00000557498 DSCR8Q96T75 97 aa8.69□□□□□ -1.02
ARHGEF40-208ENST00000557498 TRBV7-4A0A0J9YYF1 115 aa8.68□□□□□ -1.02
ARHGEF40-208ENST00000557498 J3QR89 54 aa8.68□□□□□ -1.02
ARHGEF40-208ENST00000557498 IGLV8-61A0A075B6I0 122 aa8.67□□□□□ -1.02
ARHGEF40-208ENST00000557498 K7ERU9 68 aa8.67□□□□□ -1.02
ARHGEF40-208ENST00000557498 PDE6GP18545 87 aa8.67□□□□□ -1.02
ARHGEF40-208ENST00000557498 FAM229AH3BQW9 127 aa8.66□□□□□ -1.02
ARHGEF40-208ENST00000557498 PLA2G1BP04054 148 aaKnown RBP8.66□□□□□ -1.02
ARHGEF40-208ENST00000557498 Q6ZQT0 140 aa8.66□□□□□ -1.02
ARHGEF40-208ENST00000557498 ANAPC11Q9NYG5 84 aa8.66□□□□□ -1.02
ARHGEF40-208ENST00000557498 CCKP06307 115 aa8.64□□□□□ -1.03
ARHGEF40-208ENST00000557498 C21orf62-AS1Q17RA5 79 aa8.64□□□□□ -1.03
ARHGEF40-208ENST00000557498 IGLV9-49A0A0B4J1Y8 123 aa8.63□□□□□ -1.03
ARHGEF40-208ENST00000557498 C9orf153Q5TBE3 101 aa8.63□□□□□ -1.03
ARHGEF40-208ENST00000557498 KRTAP1-4P0C5Y4 121 aa8.62□□□□□ -1.03
ARHGEF40-208ENST00000557498 FAM229BQ4G0N7 80 aa8.62□□□□□ -1.03
ARHGEF40-208ENST00000557498 Q5VSD8 79 aa8.62□□□□□ -1.03
ARHGEF40-208ENST00000557498 Q6JHZ5 121 aa8.62□□□□□ -1.03
ARHGEF40-208ENST00000557498 FAM240AA0A1B0GVK7 77 aa8.61□□□□□ -1.03
ARHGEF40-208ENST00000557498 IGFL1Q6UW32 110 aa8.61□□□□□ -1.03
ARHGEF40-208ENST00000557498 Q8NBF4 154 aa8.61□□□□□ -1.03
ARHGEF40-208ENST00000557498 VPS13BQ7Z7G8 4022 aa8.61□□□□□ -1.03
ARHGEF40-208ENST00000557498 MOBPQ13875 183 aa8.6□□□□□ -1.03
ARHGEF40-208ENST00000557498 VPS25Q9BRG1 176 aa8.59□□□□□ -1.03
ARHGEF40-208ENST00000557498 A0A0G2JQZ4 141 aa8.58□□□□□ -1.04
ARHGEF40-208ENST00000557498 A0A1W2PNM2 257 aa8.58□□□□□ -1.04
ARHGEF40-208ENST00000557498 ACYP1P07311 99 aa8.58□□□□□ -1.04
ARHGEF40-208ENST00000557498 HSPG2P98160 4391 aa8.57□□□□□ -1.04
ARHGEF40-208ENST00000557498 A0A087X002 238 aa8.57□□□□□ -1.04
ARHGEF40-208ENST00000557498 CRYGAP11844 174 aa8.56□□□□□ -1.04
ARHGEF40-208ENST00000557498 Q8N1X5 172 aa8.56□□□□□ -1.04
ARHGEF40-208ENST00000557498 KRTAP17-1Q9BYP8 105 aa8.56□□□□□ -1.04
ARHGEF40-208ENST00000557498 KRTAP13-2Q52LG2 175 aa8.55□□□□□ -1.04
ARHGEF40-208ENST00000557498 Q6Q795 121 aa8.54□□□□□ -1.04
ARHGEF40-208ENST00000557498 SSBP3-AS1Q7Z2R9 100 aa8.54□□□□□ -1.04
ARHGEF40-208ENST00000557498 LINC00846Q9NV44 126 aa8.53□□□□□ -1.04
ARHGEF40-208ENST00000557498 RYR1P21817 5038 aa8.53□□□□□ -1.04
ARHGEF40-208ENST00000557498 PKHD1L1Q86WI1 4243 aa8.53□□□□□ -1.04
ARHGEF40-208ENST00000557498 EPPK1P58107 5090 aaKnown RBP8.52□□□□□ -1.05
ARHGEF40-208ENST00000557498 A0A1B0GW54 56 aa8.52□□□□□ -1.05
ARHGEF40-208ENST00000557498 FAT1Q14517 4588 aa8.52□□□□□ -1.05
ARHGEF40-208ENST00000557498 CDIP1Q9H305 208 aa8.51□□□□□ -1.05
ARHGEF40-208ENST00000557498 PRR26Q8N8Z3 221 aa8.49□□□□□ -1.05
ARHGEF40-208ENST00000557498 TRBV7-7A0A0K0K1E9 115 aa8.48□□□□□ -1.05
ARHGEF40-208ENST00000557498 TYMSOSQ8TAI1 123 aa8.48□□□□□ -1.05
ARHGEF40-208ENST00000557498 HRCT1Q6UXD1 115 aa8.47□□□□□ -1.05
ARHGEF40-208ENST00000557498 UBL5Q9BZL1 73 aa8.47□□□□□ -1.05
ARHGEF40-208ENST00000557498 A0A087WSZ3 146 aa8.46□□□□□ -1.06
ARHGEF40-208ENST00000557498 CD164Q04900 197 aa8.46□□□□□ -1.06
ARHGEF40-208ENST00000557498 Q6ZVQ6 151 aa8.46□□□□□ -1.06
ARHGEF40-208ENST00000557498 SRRM2Q9UQ35 2752 aaKnown RBP8.44□□□□□ -1.06
ARHGEF40-208ENST00000557498 LINC00643Q86TS7 51 aa8.43□□□□□ -1.06
ARHGEF40-208ENST00000557498 NREPQ16612 68 aa8.42□□□□□ -1.06
ARHGEF40-208ENST00000557498 KIAA1109Q2LD37 5005 aa8.42□□□□□ -1.06
ARHGEF40-208ENST00000557498 SS18L2Q9UHA2 77 aa8.4□□□□□ -1.06
ARHGEF40-208ENST00000557498 LINC00304Q8N9R0 145 aa8.39□□□□□ -1.07
ARHGEF40-208ENST00000557498 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
ARHGEF40-208ENST00000557498 ATP5EP2Q5VTU8 51 aa8.38□□□□□ -1.07
ARHGEF40-208ENST00000557498 MT-ATP8P03928 68 aa8.37□□□□□ -1.07
ARHGEF40-208ENST00000557498 IGKV3D-7A0A0C4DH55 119 aa8.36□□□□□ -1.07
ARHGEF40-208ENST00000557498 SPAG11AQ6PDA7 123 aa8.36□□□□□ -1.07
ARHGEF40-208ENST00000557498 KRTAP4-5Q9BYR2 181 aa8.36□□□□□ -1.07
ARHGEF40-208ENST00000557498 SPINK1P00995 79 aa8.35□□□□□ -1.07
ARHGEF40-208ENST00000557498 KRTAP10-8P60410 259 aa8.35□□□□□ -1.07
ARHGEF40-208ENST00000557498 Q5XG85 94 aa8.35□□□□□ -1.07
ARHGEF40-208ENST00000557498 BIRC6Q9NR09 4857 aa8.34□□□□□ -1.07
ARHGEF40-208ENST00000557498 BPY2O14599 106 aa8.34□□□□□ -1.07
ARHGEF40-208ENST00000557498 CXCL6P80162 114 aa8.34□□□□□ -1.07
ARHGEF40-208ENST00000557498 SIGMAR1Q99720 223 aa8.34□□□□□ -1.07
ARHGEF40-208ENST00000557498 LIMD2Q9BT23 127 aa8.34□□□□□ -1.07
ARHGEF40-208ENST00000557498 LINC00472Q9H8W2 130 aa8.34□□□□□ -1.07
ARHGEF40-208ENST00000557498 RPS29P62273 56 aaKnown RBP8.33□□□□□ -1.08
ARHGEF40-208ENST00000557498 ASB16-AS1Q495Z4 193 aa8.33□□□□□ -1.08
ARHGEF40-208ENST00000557498 Q96NJ1 140 aa8.32□□□□□ -1.08
ARHGEF40-208ENST00000557498 DEFB116Q30KQ4 102 aa8.3□□□□□ -1.08
ARHGEF40-208ENST00000557498 J3KT08 172 aa8.29□□□□□ -1.08
ARHGEF40-208ENST00000557498 OXTP01178 125 aa8.29□□□□□ -1.08
ARHGEF40-208ENST00000557498 DSCR10P59022 87 aa8.28□□□□□ -1.08
ARHGEF40-208ENST00000557498 IGKV4-1P06312 121 aa8.27□□□□□ -1.09
ARHGEF40-208ENST00000557498 MT1HL1P0DM35 61 aa8.27□□□□□ -1.09
ARHGEF40-208ENST00000557498 IMUPQ9GZP8 106 aa8.27□□□□□ -1.09
ARHGEF40-208ENST00000557498 C1orf195Q5TG92 126 aa8.25□□□□□ -1.09
ARHGEF40-208ENST00000557498 A8MWP4 228 aa8.24□□□□□ -1.09
ARHGEF40-208ENST00000557498 HIST1H4AP62805 103 aaKnown RBP8.24□□□□□ -1.09
ARHGEF40-208ENST00000557498 Q8N9L7 120 aa8.24□□□□□ -1.09
ARHGEF40-208ENST00000557498 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
ARHGEF40-208ENST00000557498 KRTAP29-1A8MX34 341 aaPredicted RBP8.23□□□□□ -1.09
ARHGEF40-208ENST00000557498 K7EQZ3 153 aa8.23□□□□□ -1.09
ARHGEF40-208ENST00000557498 TNXBP22105 4242 aa8.22□□□□□ -1.09
ARHGEF40-208ENST00000557498 A0A087WVE0 104 aa8.2□□□□□ -1.1
ARHGEF40-208ENST00000557498 PRR15Q8IV56 129 aa8.2□□□□□ -1.1
ARHGEF40-208ENST00000557498 HERC2O95714 4834 aa8.2□□□□□ -1.1
ARHGEF40-208ENST00000557498 NDUFB1O75438 58 aa8.19□□□□□ -1.1
ARHGEF40-208ENST00000557498 FLG2Q5D862 2391 aaPredicted RBP8.19□□□□□ -1.1
ARHGEF40-208ENST00000557498 LRP1Q07954 4544 aaKnown RBP8.18□□□□□ -1.1
ARHGEF40-208ENST00000557498 A0A1B0GVX0 72 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms