RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.7□□□□□ -1.18
SHMT2-230ENST00000557427 PRYO14603 147 aa7.69□□□□□ -1.18
SHMT2-230ENST00000557427 PCP4P48539 62 aa7.68□□□□□ -1.18
SHMT2-230ENST00000557427 MT-ATP8P03928 68 aa7.67□□□□□ -1.18
SHMT2-230ENST00000557427 Q6ZQY7 126 aa7.67□□□□□ -1.18
SHMT2-230ENST00000557427 KRTAP7-1Q8IUC3 87 aa7.67□□□□□ -1.18
SHMT2-230ENST00000557427 C14orf132Q9NPU4 83 aa7.67□□□□□ -1.18
SHMT2-230ENST00000557427 IGLV1-50A0A075B6I6 118 aa7.66□□□□□ -1.18
SHMT2-230ENST00000557427 A0A0U1RQV1 116 aa7.66□□□□□ -1.18
SHMT2-230ENST00000557427 FAM168BA1KXE4 195 aa7.66□□□□□ -1.18
SHMT2-230ENST00000557427 SPRR1AP35321 89 aa7.65□□□□□ -1.18
SHMT2-230ENST00000557427 GAGE2AQ6NT46 116 aa7.65□□□□□ -1.18
SHMT2-230ENST00000557427 MRPL55Q7Z7F7 128 aaKnown RBP7.65□□□□□ -1.18
SHMT2-230ENST00000557427 KRTAP4-16G5E9R7 235 aaPredicted RBP7.64□□□□□ -1.19
SHMT2-230ENST00000557427 PHF5AQ7RTV0 110 aaKnown RBP7.64□□□□□ -1.19
SHMT2-230ENST00000557427 CCKP06307 115 aa7.63□□□□□ -1.19
SHMT2-230ENST00000557427 FAM19A5Q7Z5A7 132 aaPredicted RBP7.63□□□□□ -1.19
SHMT2-230ENST00000557427 LINC00643Q86TS7 51 aa7.62□□□□□ -1.19
SHMT2-230ENST00000557427 LOC110117498A0A087WWA1 95 aa7.61□□□□□ -1.19
SHMT2-230ENST00000557427 RPL37AP8A6NKH3 93 aa7.61□□□□□ -1.19
SHMT2-230ENST00000557427 B5MCH6 92 aa7.61□□□□□ -1.19
SHMT2-230ENST00000557427 RBM3P98179 157 aaKnown RBP7.61□□□□□ -1.19
SHMT2-230ENST00000557427 Q6Q795 121 aa7.61□□□□□ -1.19
SHMT2-230ENST00000557427 Q6ZRX8 168 aa7.61□□□□□ -1.19
SHMT2-230ENST00000557427 DHRS4-AS1Q9P1J3 65 aa7.61□□□□□ -1.19
SHMT2-230ENST00000557427 CRCT1Q9UGL9 99 aa7.61□□□□□ -1.19
SHMT2-230ENST00000557427 LAMTOR3Q9UHA4 124 aa7.61□□□□□ -1.19
SHMT2-230ENST00000557427 ETDCA0A1B0GVM5 59 aa7.6□□□□□ -1.19
SHMT2-230ENST00000557427 PDE6GP18545 87 aa7.6□□□□□ -1.19
SHMT2-230ENST00000557427 PSORS1C2Q9UIG4 136 aa7.6□□□□□ -1.19
SHMT2-230ENST00000557427 C21orf62-AS1Q17RA5 79 aa7.59□□□□□ -1.19
SHMT2-230ENST00000557427 C1orf137Q5JT78 98 aa7.59□□□□□ -1.19
SHMT2-230ENST00000557427 REG3GQ6UW15 175 aa7.59□□□□□ -1.19
SHMT2-230ENST00000557427 SPINK6Q6UWN8 80 aa7.59□□□□□ -1.19
SHMT2-230ENST00000557427 SMCR5Q8TEV8 140 aa7.59□□□□□ -1.19
SHMT2-230ENST00000557427 TRBV7-7A0A0K0K1E9 115 aa7.58□□□□□ -1.2
SHMT2-230ENST00000557427 Q6ZQT0 140 aa7.58□□□□□ -1.2
SHMT2-230ENST00000557427 A0A1B0GV72 72 aa7.57□□□□□ -1.2
SHMT2-230ENST00000557427 NDUFV3P56181 108 aaKnown RBP7.57□□□□□ -1.2
SHMT2-230ENST00000557427 KRTAP11-1Q8IUC1 163 aa7.57□□□□□ -1.2
SHMT2-230ENST00000557427 IMUPQ9GZP8 106 aa7.57□□□□□ -1.2
SHMT2-230ENST00000557427 DSCR8Q96T75 97 aa7.56□□□□□ -1.2
SHMT2-230ENST00000557427 Q9BRP9 147 aa7.56□□□□□ -1.2
SHMT2-230ENST00000557427 LINC00846Q9NV44 126 aa7.56□□□□□ -1.2
SHMT2-230ENST00000557427 TRBV7-4A0A0J9YYF1 115 aa7.55□□□□□ -1.2
SHMT2-230ENST00000557427 UBE2BP63146 152 aa7.55□□□□□ -1.2
SHMT2-230ENST00000557427 LCE2DQ5TA82 110 aaPredicted RBP7.54□□□□□ -1.2
SHMT2-230ENST00000557427 Q6JHZ5 121 aa7.54□□□□□ -1.2
SHMT2-230ENST00000557427 IGLV5-48A0A075B6I7 105 aa7.53□□□□□ -1.2
SHMT2-230ENST00000557427 LINC01547P58512 204 aaPredicted RBP7.53□□□□□ -1.2
SHMT2-230ENST00000557427 Q8N377 158 aa7.53□□□□□ -1.2
SHMT2-230ENST00000557427 IGLV7-43P04211 117 aa7.52□□□□□ -1.21
SHMT2-230ENST00000557427 H0Y9J4 135 aa7.5□□□□□ -1.21
SHMT2-230ENST00000557427 ATP5EP2Q5VTU8 51 aa7.49□□□□□ -1.21
SHMT2-230ENST00000557427 FAM19A1Q7Z5A9 133 aa7.49□□□□□ -1.21
SHMT2-230ENST00000557427 DEFB105AQ8NG35 78 aa7.49□□□□□ -1.21
SHMT2-230ENST00000557427 UBL5Q9BZL1 73 aa7.49□□□□□ -1.21
SHMT2-230ENST00000557427 ERC2-IT1O76042 136 aa7.48□□□□□ -1.21
SHMT2-230ENST00000557427 ST20-AS1Q8NBB2 130 aa7.47□□□□□ -1.21
SHMT2-230ENST00000557427 PRR4Q16378 134 aa7.46□□□□□ -1.22
SHMT2-230ENST00000557427 PRLHP81277 87 aa7.45□□□□□ -1.22
SHMT2-230ENST00000557427 PRR26Q8N8Z3 221 aa7.45□□□□□ -1.22
SHMT2-230ENST00000557427 IGKV3D-7A0A0C4DH55 119 aa7.44□□□□□ -1.22
SHMT2-230ENST00000557427 A0A1B0GW54 56 aa7.44□□□□□ -1.22
SHMT2-230ENST00000557427 BCE1O60756 84 aa7.43□□□□□ -1.22
SHMT2-230ENST00000557427 Q6ZVQ6 151 aa7.43□□□□□ -1.22
SHMT2-230ENST00000557427 ANAPC13Q9BS18 74 aa7.43□□□□□ -1.22
SHMT2-230ENST00000557427 ZNF861PO60384 105 aa7.42□□□□□ -1.22
SHMT2-230ENST00000557427 SPRR1BP22528 89 aa7.42□□□□□ -1.22
SHMT2-230ENST00000557427 SMIM29Q86T20 159 aa7.42□□□□□ -1.22
SHMT2-230ENST00000557427 C3orf22Q8N5N4 141 aa7.42□□□□□ -1.22
SHMT2-230ENST00000557427 HIGD2AQ9BW72 106 aa7.42□□□□□ -1.22
SHMT2-230ENST00000557427 FAM236AA0A1B0GUQ0 79 aa7.41□□□□□ -1.22
SHMT2-230ENST00000557427 FAM236BA0A1B0GV22 79 aa7.41□□□□□ -1.22
SHMT2-230ENST00000557427 KRTAP13-1Q8IUC0 172 aa7.41□□□□□ -1.22
SHMT2-230ENST00000557427 F8WEM9 126 aa7.4□□□□□ -1.22
SHMT2-230ENST00000557427 UBE2AP49459 152 aa7.4□□□□□ -1.22
SHMT2-230ENST00000557427 HIST1H4AP62805 103 aaKnown RBP7.4□□□□□ -1.22
SHMT2-230ENST00000557427 IGLV8-61A0A075B6I0 122 aa7.39□□□□□ -1.23
SHMT2-230ENST00000557427 CXCL6P80162 114 aa7.39□□□□□ -1.23
SHMT2-230ENST00000557427 KRTAP1-4P0C5Y4 121 aa7.38□□□□□ -1.23
SHMT2-230ENST00000557427 Q8NBF4 154 aa7.38□□□□□ -1.23
SHMT2-230ENST00000557427 MUC17Q685J3 4493 aa7.37□□□□□ -1.23
SHMT2-230ENST00000557427 A0A1W2PNM2 257 aa7.37□□□□□ -1.23
SHMT2-230ENST00000557427 SPRR4Q96PI1 79 aa7.37□□□□□ -1.23
SHMT2-230ENST00000557427 ATOX1O00244 68 aa7.35□□□□□ -1.23
SHMT2-230ENST00000557427 NREPQ16612 68 aa7.34□□□□□ -1.23
SHMT2-230ENST00000557427 A0A087WVE0 104 aa7.33□□□□□ -1.24
SHMT2-230ENST00000557427 CRYGAP11844 174 aa7.33□□□□□ -1.24
SHMT2-230ENST00000557427 IGFL1Q6UW32 110 aa7.33□□□□□ -1.24
SHMT2-230ENST00000557427 ANAPC11Q9NYG5 84 aa7.33□□□□□ -1.24
SHMT2-230ENST00000557427 ZNF706Q9Y5V0 76 aaPredicted RBP7.3□□□□□ -1.24
SHMT2-230ENST00000557427 LINC00483Q53H64 154 aa7.29□□□□□ -1.24
SHMT2-230ENST00000557427 A0A087X002 238 aa7.28□□□□□ -1.24
SHMT2-230ENST00000557427 BPY2O14599 106 aa7.28□□□□□ -1.24
SHMT2-230ENST00000557427 TYMSOSQ8TAI1 123 aa7.27□□□□□ -1.25
SHMT2-230ENST00000557427 CCDC179H3BU77 68 aa7.26□□□□□ -1.25
SHMT2-230ENST00000557427 UQCRQO14949 82 aa7.26□□□□□ -1.25
SHMT2-230ENST00000557427 COX7CP15954 63 aa7.25□□□□□ -1.25
SHMT2-230ENST00000557427 SERP2Q8N6R1 65 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms