RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 TRIAP1O43715 76 aa6.76□□□□□ -1.33
RTN1-208ENST00000557422 LORP23490 312 aaPredicted RBP6.76□□□□□ -1.33
RTN1-208ENST00000557422 H0YGX0 51 aa6.74□□□□□ -1.33
RTN1-208ENST00000557422 KRTAP10-6P60371 365 aaPredicted RBP6.74□□□□□ -1.33
RTN1-208ENST00000557422 ATXN8Q156A1 80 aa6.74□□□□□ -1.33
RTN1-208ENST00000557422 OR13C6PQ8NH95 151 aa6.74□□□□□ -1.33
RTN1-208ENST00000557422 F8W1H4 67 aa6.73□□□□□ -1.33
RTN1-208ENST00000557422 IGLV6-57P01721 117 aa6.73□□□□□ -1.33
RTN1-208ENST00000557422 S100A7L2Q5SY68 101 aa6.73□□□□□ -1.33
RTN1-208ENST00000557422 Q8NDZ9 215 aa6.73□□□□□ -1.33
RTN1-208ENST00000557422 TCL1BO95988 128 aa6.72□□□□□ -1.33
RTN1-208ENST00000557422 Q8N377 158 aa6.72□□□□□ -1.33
RTN1-208ENST00000557422 SMIM11BQ8TCY0 68 aa6.72□□□□□ -1.33
RTN1-208ENST00000557422 ZNF706Q9Y5V0 76 aaPredicted RBP6.72□□□□□ -1.33
RTN1-208ENST00000557422 KRTAP9-7A8MTY7 169 aa6.71□□□□□ -1.34
RTN1-208ENST00000557422 H3BMG7 143 aa6.71□□□□□ -1.34
RTN1-208ENST00000557422 LST1O00453 97 aa6.71□□□□□ -1.34
RTN1-208ENST00000557422 A0A1B0GX51 115 aa6.7□□□□□ -1.34
RTN1-208ENST00000557422 NCR3O14931 201 aa6.7□□□□□ -1.34
RTN1-208ENST00000557422 TRACP01848 142 aa6.69□□□□□ -1.34
RTN1-208ENST00000557422 RPS29P62273 56 aaKnown RBP6.69□□□□□ -1.34
RTN1-208ENST00000557422 TRBV7-6A0A0J9YX20 115 aa6.68□□□□□ -1.34
RTN1-208ENST00000557422 SLC25A20O43772 301 aa6.68□□□□□ -1.34
RTN1-208ENST00000557422 SNCGO76070 127 aa6.68□□□□□ -1.34
RTN1-208ENST00000557422 TRAV23DV6A0A075B6W5 121 aa6.67□□□□□ -1.34
RTN1-208ENST00000557422 TRBV10-3A0A0K0K1G6 114 aa6.67□□□□□ -1.34
RTN1-208ENST00000557422 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.67□□□□□ -1.34
RTN1-208ENST00000557422 SMCR5Q8TEV8 140 aa6.67□□□□□ -1.34
RTN1-208ENST00000557422 PRO0461Q9UI25 63 aa6.67□□□□□ -1.34
RTN1-208ENST00000557422 IGLV8-61A0A075B6I0 122 aa6.66□□□□□ -1.34
RTN1-208ENST00000557422 LINC00483Q53H64 154 aa6.66□□□□□ -1.34
RTN1-208ENST00000557422 PCOTHQ58A44 107 aa6.66□□□□□ -1.34
RTN1-208ENST00000557422 KCNQ1DNQ9H478 68 aa6.66□□□□□ -1.34
RTN1-208ENST00000557422 ZNF73O43830 326 aaPredicted RBP6.65□□□□□ -1.34
RTN1-208ENST00000557422 MOBPQ13875 183 aa6.65□□□□□ -1.34
RTN1-208ENST00000557422 C6orf99Q4VX62 202 aa6.65□□□□□ -1.34
RTN1-208ENST00000557422 CLEC2BQ92478 149 aa6.65□□□□□ -1.34
RTN1-208ENST00000557422 C9JAW5 83 aa6.64□□□□□ -1.35
RTN1-208ENST00000557422 H3BT86 120 aa6.64□□□□□ -1.35
RTN1-208ENST00000557422 SSBP3-AS1Q7Z2R9 100 aa6.64□□□□□ -1.35
RTN1-208ENST00000557422 IGLV9-49A0A0B4J1Y8 123 aa6.63□□□□□ -1.35
RTN1-208ENST00000557422 H3BQ85 93 aa6.63□□□□□ -1.35
RTN1-208ENST00000557422 M0R2T5 61 aa6.63□□□□□ -1.35
RTN1-208ENST00000557422 PRYO14603 147 aa6.63□□□□□ -1.35
RTN1-208ENST00000557422 DNAL4O96015 105 aa6.63□□□□□ -1.35
RTN1-208ENST00000557422 GAGE2AQ6NT46 116 aa6.63□□□□□ -1.35
RTN1-208ENST00000557422 KRTAP4-16G5E9R7 235 aaPredicted RBP6.62□□□□□ -1.35
RTN1-208ENST00000557422 SPRR1AP35321 89 aa6.62□□□□□ -1.35
RTN1-208ENST00000557422 LINC00575Q6W349 94 aa6.62□□□□□ -1.35
RTN1-208ENST00000557422 ANKRD29Q8N6D5 301 aa6.62□□□□□ -1.35
RTN1-208ENST00000557422 FAM218AQ96MZ4 157 aa6.62□□□□□ -1.35
RTN1-208ENST00000557422 GHRHP01286 108 aa6.61□□□□□ -1.35
RTN1-208ENST00000557422 COX7BP24311 80 aa6.61□□□□□ -1.35
RTN1-208ENST00000557422 SMCPP49901 116 aaPredicted RBP6.61□□□□□ -1.35
RTN1-208ENST00000557422 ELOF1P60002 83 aaKnown RBP6.61□□□□□ -1.35
RTN1-208ENST00000557422 ETDCA0A1B0GVM5 59 aa6.59□□□□□ -1.35
RTN1-208ENST00000557422 hADV29S1A0JD25 119 aa6.59□□□□□ -1.35
RTN1-208ENST00000557422 TEN1Q86WV5 123 aa6.59□□□□□ -1.35
RTN1-208ENST00000557422 ERC2-IT1O76042 136 aa6.58□□□□□ -1.36
RTN1-208ENST00000557422 BAALC-AS2P0C853 105 aa6.58□□□□□ -1.36
RTN1-208ENST00000557422 ETDBQ3ZM63 59 aa6.58□□□□□ -1.36
RTN1-208ENST00000557422 OCIAD2Q56VL3 154 aa6.58□□□□□ -1.36
RTN1-208ENST00000557422 ORMDL1Q9P0S3 153 aa6.58□□□□□ -1.36
RTN1-208ENST00000557422 J3QR89 54 aa6.57□□□□□ -1.36
RTN1-208ENST00000557422 TMEM256-PLSCR3K7ERE1 68 aa6.57□□□□□ -1.36
RTN1-208ENST00000557422 MTURNQ8N3F0 131 aa6.57□□□□□ -1.36
RTN1-208ENST00000557422 C9orf92A6NGG3 77 aa6.56□□□□□ -1.36
RTN1-208ENST00000557422 K7ERU9 68 aa6.56□□□□□ -1.36
RTN1-208ENST00000557422 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.56□□□□□ -1.36
RTN1-208ENST00000557422 PPDPFLQ8WWR9 84 aa6.56□□□□□ -1.36
RTN1-208ENST00000557422 DHRS4-AS1Q9P1J3 65 aa6.56□□□□□ -1.36
RTN1-208ENST00000557422 FLGP20930 4061 aaPredicted RBP6.55□□□□□ -1.36
RTN1-208ENST00000557422 B5MCH6 92 aa6.55□□□□□ -1.36
RTN1-208ENST00000557422 Q6ZRX8 168 aa6.54□□□□□ -1.36
RTN1-208ENST00000557422 COX6B2Q6YFQ2 88 aa6.53□□□□□ -1.36
RTN1-208ENST00000557422 Q9BRP9 147 aa6.53□□□□□ -1.36
RTN1-208ENST00000557422 C9orf153Q5TBE3 101 aa6.52□□□□□ -1.37
RTN1-208ENST00000557422 JMJD7-PLA2G4BH0Y9G9 81 aa6.51□□□□□ -1.37
RTN1-208ENST00000557422 Q6ZQY7 126 aa6.51□□□□□ -1.37
RTN1-208ENST00000557422 OBSCN-AS1Q96MR7 158 aa6.5□□□□□ -1.37
RTN1-208ENST00000557422 TEX49A0A1B0GTD5 131 aa6.49□□□□□ -1.37
RTN1-208ENST00000557422 C21orf62-AS1Q17RA5 79 aa6.48□□□□□ -1.37
RTN1-208ENST00000557422 LIMD2Q9BT23 127 aa6.48□□□□□ -1.37
RTN1-208ENST00000557422 IGLV5-48A0A075B6I7 105 aa6.46□□□□□ -1.38
RTN1-208ENST00000557422 HRCT1Q6UXD1 115 aa6.46□□□□□ -1.38
RTN1-208ENST00000557422 FAM240AA0A1B0GVK7 77 aa6.45□□□□□ -1.38
RTN1-208ENST00000557422 ACYP1P07311 99 aa6.45□□□□□ -1.38
RTN1-208ENST00000557422 PDE6GP18545 87 aa6.45□□□□□ -1.38
RTN1-208ENST00000557422 ST20-AS1Q8NBB2 130 aa6.45□□□□□ -1.38
RTN1-208ENST00000557422 RPL37P61927 97 aaKnown RBP6.44□□□□□ -1.38
RTN1-208ENST00000557422 RBM3P98179 157 aaKnown RBP6.44□□□□□ -1.38
RTN1-208ENST00000557422 LAMTOR3Q9UHA4 124 aa6.44□□□□□ -1.38
RTN1-208ENST00000557422 LOC110117498A0A087WWA1 95 aa6.42□□□□□ -1.38
RTN1-208ENST00000557422 NDUFV3P56181 108 aaKnown RBP6.42□□□□□ -1.38
RTN1-208ENST00000557422 DSCR8Q96T75 97 aa6.41□□□□□ -1.38
RTN1-208ENST00000557422 SSPOA2VEC9 5147 aa6.4□□□□□ -1.38
RTN1-208ENST00000557422 CCKP06307 115 aa6.4□□□□□ -1.38
RTN1-208ENST00000557422 SPRR1BP22528 89 aa6.4□□□□□ -1.38
RTN1-208ENST00000557422 C14orf132Q9NPU4 83 aa6.4□□□□□ -1.38
RTN1-208ENST00000557422 USH2AO75445 5202 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms