RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 CHTOPQ9Y3Y2 248 aaKnown RBP2.94□□□□□ -1.94
ATXN3-245ENST00000556958 SYS1-DBNDD2H3BUS1 97 aa2.93□□□□□ -1.94
ATXN3-245ENST00000556958 PFN2P35080 140 aa2.93□□□□□ -1.94
ATXN3-245ENST00000556958 LINC01545Q5VT33 79 aa2.93□□□□□ -1.94
ATXN3-245ENST00000556958 SLC25A34Q6PIV7 304 aa2.93□□□□□ -1.94
ATXN3-245ENST00000556958 ZNF625Q96I27 306 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-245ENST00000556958 PRAC1Q96KF2 57 aa2.93□□□□□ -1.94
ATXN3-245ENST00000556958 LIMD2Q9BT23 127 aa2.93□□□□□ -1.94
ATXN3-245ENST00000556958 KRTAP2-1Q9BYU5 128 aa2.93□□□□□ -1.94
ATXN3-245ENST00000556958 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
ATXN3-245ENST00000556958 TRBV20-1A0A075B6N2 111 aa2.92□□□□□ -1.94
ATXN3-245ENST00000556958 A0A096LNJ9 63 aa2.92□□□□□ -1.94
ATXN3-245ENST00000556958 A0A0U1RRA0 63 aa2.92□□□□□ -1.94
ATXN3-245ENST00000556958 CXCL5P42830 114 aa2.92□□□□□ -1.94
ATXN3-245ENST00000556958 KRTAP10-5P60370 271 aa2.92□□□□□ -1.94
ATXN3-245ENST00000556958 LINC00483Q53H64 154 aa2.92□□□□□ -1.94
ATXN3-245ENST00000556958 A6NDN8 102 aa2.91□□□□□ -1.94
ATXN3-245ENST00000556958 C11orf86A6NJI1 115 aa2.91□□□□□ -1.94
ATXN3-245ENST00000556958 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
ATXN3-245ENST00000556958 COX8AP10176 69 aa2.91□□□□□ -1.94
ATXN3-245ENST00000556958 LINC00158P58513 81 aa2.91□□□□□ -1.94
ATXN3-245ENST00000556958 BATFQ16520 125 aa2.91□□□□□ -1.94
ATXN3-245ENST00000556958 ATP11AUNQ6ZP68 121 aa2.91□□□□□ -1.94
ATXN3-245ENST00000556958 FAM19A3Q7Z5A8 133 aa2.91□□□□□ -1.94
ATXN3-245ENST00000556958 BOD1L2Q8IYS8 172 aa2.91□□□□□ -1.94
ATXN3-245ENST00000556958 SMCR5Q8TEV8 140 aa2.91□□□□□ -1.94
ATXN3-245ENST00000556958 ZNF22P17026 224 aaPredicted RBP2.9□□□□□ -1.95
ATXN3-245ENST00000556958 C6orf99Q4VX62 202 aa2.9□□□□□ -1.95
ATXN3-245ENST00000556958 BVES-AS1Q5T3Y7 98 aa2.9□□□□□ -1.95
ATXN3-245ENST00000556958 GTF2H5Q6ZYL4 71 aa2.9□□□□□ -1.95
ATXN3-245ENST00000556958 LITAFQ99732 161 aa2.9□□□□□ -1.95
ATXN3-245ENST00000556958 TRAV12-1A0A0B4J245 112 aa2.89□□□□□ -1.95
ATXN3-245ENST00000556958 K7ERU9 68 aa2.89□□□□□ -1.95
ATXN3-245ENST00000556958 TAX1BP3O14907 124 aa2.89□□□□□ -1.95
ATXN3-245ENST00000556958 DPM2O94777 84 aa2.89□□□□□ -1.95
ATXN3-245ENST00000556958 HINT1P49773 126 aaPredicted RBP2.89□□□□□ -1.95
ATXN3-245ENST00000556958 HSD52Q0P140 79 aa2.89□□□□□ -1.95
ATXN3-245ENST00000556958 VAMP3Q15836 100 aa2.89□□□□□ -1.95
ATXN3-245ENST00000556958 MEIG1Q5JSS6 88 aa2.89□□□□□ -1.95
ATXN3-245ENST00000556958 HIGD1BQ9P298 99 aa2.89□□□□□ -1.95
ATXN3-245ENST00000556958 TMEM223A0PJW6 202 aa2.88□□□□□ -1.95
ATXN3-245ENST00000556958 IGKCP01834 107 aa2.88□□□□□ -1.95
ATXN3-245ENST00000556958 MT3P25713 68 aa2.88□□□□□ -1.95
ATXN3-245ENST00000556958 HERVK_113P61574 105 aa2.88□□□□□ -1.95
ATXN3-245ENST00000556958 TAL2Q16559 108 aa2.88□□□□□ -1.95
ATXN3-245ENST00000556958 C9orf153Q5TBE3 101 aa2.88□□□□□ -1.95
ATXN3-245ENST00000556958 C20orf166-AS1Q96NR2 134 aa2.88□□□□□ -1.95
ATXN3-245ENST00000556958 ERG28Q9UKR5 140 aa2.88□□□□□ -1.95
ATXN3-245ENST00000556958 MYMXA0A1B0GTQ4 84 aa2.87□□□□□ -1.95
ATXN3-245ENST00000556958 LEPROTO15243 131 aa2.87□□□□□ -1.95
ATXN3-245ENST00000556958 SMIM13P0DJ93 91 aa2.87□□□□□ -1.95
ATXN3-245ENST00000556958 PLNP26678 52 aa2.87□□□□□ -1.95
ATXN3-245ENST00000556958 ADAMTSL4-AS1Q5T5F5 129 aa2.87□□□□□ -1.95
ATXN3-245ENST00000556958 NOTCH2NLQ7Z3S9 236 aa2.87□□□□□ -1.95
ATXN3-245ENST00000556958 ATOH7Q8N100 152 aa2.87□□□□□ -1.95
ATXN3-245ENST00000556958 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
ATXN3-245ENST00000556958 NPC2P61916 151 aa2.86□□□□□ -1.95
ATXN3-245ENST00000556958 OCIAD2Q56VL3 154 aa2.86□□□□□ -1.95
ATXN3-245ENST00000556958 C2orf91Q6ZV80 131 aa2.86□□□□□ -1.95
ATXN3-245ENST00000556958 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
ATXN3-245ENST00000556958 SND1-IT1Q9HBX3 110 aa2.86□□□□□ -1.95
ATXN3-245ENST00000556958 ETDCA0A1B0GVM5 59 aa2.85□□□□□ -1.95
ATXN3-245ENST00000556958 J3QQQ9 107 aa2.85□□□□□ -1.95
ATXN3-245ENST00000556958 J3QR89 54 aa2.85□□□□□ -1.95
ATXN3-245ENST00000556958 K7EP34 96 aa2.85□□□□□ -1.95
ATXN3-245ENST00000556958 FABP2P12104 132 aa2.85□□□□□ -1.95
ATXN3-245ENST00000556958 HERV-K104P63124 156 aa2.85□□□□□ -1.95
ATXN3-245ENST00000556958 COX17Q14061 63 aa2.85□□□□□ -1.95
ATXN3-245ENST00000556958 SFTA2Q6UW10 78 aa2.85□□□□□ -1.95
ATXN3-245ENST00000556958 MIR7-3HGQ8N6C7 128 aa2.85□□□□□ -1.95
ATXN3-245ENST00000556958 FAM236DA0A1B0GTK5 79 aa2.84□□□□□ -1.95
ATXN3-245ENST00000556958 A0A1W2PPM0 123 aa2.84□□□□□ -1.95
ATXN3-245ENST00000556958 F8W1H4 67 aa2.84□□□□□ -1.95
ATXN3-245ENST00000556958 NCR3O14931 201 aa2.84□□□□□ -1.95
ATXN3-245ENST00000556958 FAM236CP0DP71 79 aa2.84□□□□□ -1.95
ATXN3-245ENST00000556958 SCGB1A1P11684 91 aa2.84□□□□□ -1.95
ATXN3-245ENST00000556958 HRCT1Q6UXD1 115 aa2.84□□□□□ -1.95
ATXN3-245ENST00000556958 A0A1B0GWB2 263 aa2.83□□□□□ -1.96
ATXN3-245ENST00000556958 A6NN06 94 aa2.83□□□□□ -1.96
ATXN3-245ENST00000556958 ZNF815PA8K554 130 aa2.83□□□□□ -1.96
ATXN3-245ENST00000556958 NMUP48645 174 aa2.83□□□□□ -1.96
ATXN3-245ENST00000556958 TSPEAR-AS2P59090 65 aa2.83□□□□□ -1.96
ATXN3-245ENST00000556958 LYRM7Q5U5X0 104 aa2.83□□□□□ -1.96
ATXN3-245ENST00000556958 OR13C6PQ8NH95 151 aa2.83□□□□□ -1.96
ATXN3-245ENST00000556958 VPS25Q9BRG1 176 aa2.83□□□□□ -1.96
ATXN3-245ENST00000556958 A4D1N5 150 aa2.82□□□□□ -1.96
ATXN3-245ENST00000556958 E9PLD3 99 aa2.82□□□□□ -1.96
ATXN3-245ENST00000556958 H3BUT2 72 aa2.82□□□□□ -1.96
ATXN3-245ENST00000556958 S100A7L2Q5SY68 101 aa2.82□□□□□ -1.96
ATXN3-245ENST00000556958 SCGB1D4Q6XE38 83 aa2.82□□□□□ -1.96
ATXN3-245ENST00000556958 CEND1Q8N111 149 aa2.82□□□□□ -1.96
ATXN3-245ENST00000556958 TTTY13Q9BZ97 58 aa2.82□□□□□ -1.96
ATXN3-245ENST00000556958 SPCS1Q9Y6A9 102 aa2.82□□□□□ -1.96
ATXN3-245ENST00000556958 A0A0J9YXY3 114 aa2.81□□□□□ -1.96
ATXN3-245ENST00000556958 SPRR1AP35321 89 aa2.81□□□□□ -1.96
ATXN3-245ENST00000556958 C1orf195Q5TG92 126 aa2.81□□□□□ -1.96
ATXN3-245ENST00000556958 Q6ZVH6 145 aa2.81□□□□□ -1.96
ATXN3-245ENST00000556958 KCNQ1DNQ9H478 68 aa2.81□□□□□ -1.96
ATXN3-245ENST00000556958 CD164Q04900 197 aa2.8□□□□□ -1.96
ATXN3-245ENST00000556958 Q5XG85 94 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms