RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 Q8N377 158 aa14.43□□□□□ -0.1
SIX4-203ENST00000556952 TEX49A0A1B0GTD5 131 aa14.42□□□□□ -0.1
SIX4-203ENST00000556952 ZNF706Q9Y5V0 76 aaPredicted RBP14.41□□□□□ -0.1
SIX4-203ENST00000556952 SPRR1BP22528 89 aa14.38□□□□□ -0.11
SIX4-203ENST00000556952 LAMTOR3Q9UHA4 124 aa14.38□□□□□ -0.11
SIX4-203ENST00000556952 KRTAP10-4P60372 401 aaPredicted RBP14.37□□□□□ -0.11
SIX4-203ENST00000556952 JMJD7-PLA2G4BH0Y9G9 81 aa14.36□□□□□ -0.11
SIX4-203ENST00000556952 SPRR4Q96PI1 79 aa14.36□□□□□ -0.11
SIX4-203ENST00000556952 NDUFV3P56181 108 aaKnown RBP14.35□□□□□ -0.11
SIX4-203ENST00000556952 PKHD1L1Q86WI1 4243 aa14.35□□□□□ -0.11
SIX4-203ENST00000556952 PLA2G1BP04054 148 aaKnown RBP14.34□□□□□ -0.11
SIX4-203ENST00000556952 GAGE2AQ6NT46 116 aa14.34□□□□□ -0.11
SIX4-203ENST00000556952 OBSCN-AS1Q96MR7 158 aa14.34□□□□□ -0.11
SIX4-203ENST00000556952 LINC00483Q53H64 154 aa14.32□□□□□ -0.12
SIX4-203ENST00000556952 SMIM29Q86T20 159 aa14.3□□□□□ -0.12
SIX4-203ENST00000556952 C3orf22Q8N5N4 141 aa14.3□□□□□ -0.12
SIX4-203ENST00000556952 RBM3P98179 157 aaKnown RBP14.28□□□□□ -0.12
SIX4-203ENST00000556952 MYCBP2O75592 4640 aa14.28□□□□□ -0.12
SIX4-203ENST00000556952 A0A1B0GV72 72 aa14.26□□□□□ -0.13
SIX4-203ENST00000556952 F8WEM9 126 aa14.26□□□□□ -0.13
SIX4-203ENST00000556952 SPINK6Q6UWN8 80 aa14.26□□□□□ -0.13
SIX4-203ENST00000556952 FLG2Q5D862 2391 aaPredicted RBP14.26□□□□□ -0.13
SIX4-203ENST00000556952 C14orf132Q9NPU4 83 aa14.24□□□□□ -0.13
SIX4-203ENST00000556952 DSCR8Q96T75 97 aa14.23□□□□□ -0.13
SIX4-203ENST00000556952 IGLV8-61A0A075B6I0 122 aa14.2□□□□□ -0.14
SIX4-203ENST00000556952 LOC110117498A0A087WWA1 95 aa14.2□□□□□ -0.14
SIX4-203ENST00000556952 TRBV7-4A0A0J9YYF1 115 aa14.2□□□□□ -0.14
SIX4-203ENST00000556952 PDE6GP18545 87 aa14.19□□□□□ -0.14
SIX4-203ENST00000556952 J3QR89 54 aa14.18□□□□□ -0.14
SIX4-203ENST00000556952 C21orf62-AS1Q17RA5 79 aa14.17□□□□□ -0.14
SIX4-203ENST00000556952 FAT3Q8TDW7 4589 aa14.15□□□□□ -0.14
SIX4-203ENST00000556952 LRP1Q07954 4544 aaKnown RBP14.15□□□□□ -0.14
SIX4-203ENST00000556952 FAM229BQ4G0N7 80 aa14.15□□□□□ -0.14
SIX4-203ENST00000556952 Q6ZQT0 140 aa14.15□□□□□ -0.14
SIX4-203ENST00000556952 ANAPC11Q9NYG5 84 aa14.15□□□□□ -0.14
SIX4-203ENST00000556952 K7ERU9 68 aa14.14□□□□□ -0.15
SIX4-203ENST00000556952 KRTAP1-4P0C5Y4 121 aa14.13□□□□□ -0.15
SIX4-203ENST00000556952 IGLV9-49A0A0B4J1Y8 123 aa14.13□□□□□ -0.15
SIX4-203ENST00000556952 Q6JHZ5 121 aa14.13□□□□□ -0.15
SIX4-203ENST00000556952 CCKP06307 115 aa14.12□□□□□ -0.15
SIX4-203ENST00000556952 C9orf153Q5TBE3 101 aa14.11□□□□□ -0.15
SIX4-203ENST00000556952 Q8NBF4 154 aa14.1□□□□□ -0.15
SIX4-203ENST00000556952 IGFL1Q6UW32 110 aa14.09□□□□□ -0.15
SIX4-203ENST00000556952 FAM240AA0A1B0GVK7 77 aa14.07□□□□□ -0.16
SIX4-203ENST00000556952 MOBPQ13875 183 aa14.07□□□□□ -0.16
SIX4-203ENST00000556952 CRYGAP11844 174 aa14.05□□□□□ -0.16
SIX4-203ENST00000556952 A0A087X002 238 aa14.05□□□□□ -0.16
SIX4-203ENST00000556952 ACYP1P07311 99 aa14.04□□□□□ -0.16
SIX4-203ENST00000556952 VPS25Q9BRG1 176 aa14.04□□□□□ -0.16
SIX4-203ENST00000556952 A0A1W2PNM2 257 aa14□□□□□ -0.17
SIX4-203ENST00000556952 SSBP3-AS1Q7Z2R9 100 aa14□□□□□ -0.17
SIX4-203ENST00000556952 A0A1B0GW54 56 aa14□□□□□ -0.17
SIX4-203ENST00000556952 KRTAP13-2Q52LG2 175 aa14□□□□□ -0.17
SIX4-203ENST00000556952 Q6Q795 121 aa13.98□□□□□ -0.17
SIX4-203ENST00000556952 DMBT1Q9UGM3 2413 aaPredicted RBP13.98□□□□□ -0.17
SIX4-203ENST00000556952 A0A0G2JQZ4 141 aa13.97□□□□□ -0.17
SIX4-203ENST00000556952 KRTAP29-1A8MX34 341 aaPredicted RBP13.95□□□□□ -0.18
SIX4-203ENST00000556952 HERC1Q15751 4861 aa13.92□□□□□ -0.18
SIX4-203ENST00000556952 TYMSOSQ8TAI1 123 aa13.92□□□□□ -0.18
SIX4-203ENST00000556952 LINC00846Q9NV44 126 aa13.91□□□□□ -0.18
SIX4-203ENST00000556952 OXTP01178 125 aa13.9□□□□□ -0.18
SIX4-203ENST00000556952 PRR26Q8N8Z3 221 aa13.9□□□□□ -0.18
SIX4-203ENST00000556952 TNXBP22105 4242 aa13.89□□□□□ -0.19
SIX4-203ENST00000556952 CD164Q04900 197 aa13.88□□□□□ -0.19
SIX4-203ENST00000556952 J3QL48 77 aa13.88□□□□□ -0.19
SIX4-203ENST00000556952 TRBV7-7A0A0K0K1E9 115 aa13.87□□□□□ -0.19
SIX4-203ENST00000556952 UBL5Q9BZL1 73 aa13.85□□□□□ -0.19
SIX4-203ENST00000556952 A0A087WSZ3 146 aa13.84□□□□□ -0.19
SIX4-203ENST00000556952 CDIP1Q9H305 208 aa13.84□□□□□ -0.19
SIX4-203ENST00000556952 HRCT1Q6UXD1 115 aa13.83□□□□□ -0.2
SIX4-203ENST00000556952 MT1HL1P0DM35 61 aa13.82□□□□□ -0.2
SIX4-203ENST00000556952 Q6ZVQ6 151 aa13.79□□□□□ -0.2
SIX4-203ENST00000556952 SS18L2Q9UHA2 77 aa13.79□□□□□ -0.2
SIX4-203ENST00000556952 NREPQ16612 68 aa13.78□□□□□ -0.2
SIX4-203ENST00000556952 C4orf48Q5BLP8 95 aa13.77□□□□□ -0.21
SIX4-203ENST00000556952 LINC00643Q86TS7 51 aa13.75□□□□□ -0.21
SIX4-203ENST00000556952 LINC00304Q8N9R0 145 aa13.75□□□□□ -0.21
SIX4-203ENST00000556952 SPAG11AQ6PDA7 123 aa13.75□□□□□ -0.21
SIX4-203ENST00000556952 SPINK1P00995 79 aa13.73□□□□□ -0.21
SIX4-203ENST00000556952 KRTAP10-8P60410 259 aa13.71□□□□□ -0.22
SIX4-203ENST00000556952 Q5XG85 94 aa13.71□□□□□ -0.22
SIX4-203ENST00000556952 RPS29P62273 56 aaKnown RBP13.7□□□□□ -0.22
SIX4-203ENST00000556952 LIMD2Q9BT23 127 aa13.7□□□□□ -0.22
SIX4-203ENST00000556952 ATP5EP2Q5VTU8 51 aa13.69□□□□□ -0.22
SIX4-203ENST00000556952 ASB16-AS1Q495Z4 193 aa13.66□□□□□ -0.22
SIX4-203ENST00000556952 LINC00472Q9H8W2 130 aa13.64□□□□□ -0.23
SIX4-203ENST00000556952 BPY2O14599 106 aa13.63□□□□□ -0.23
SIX4-203ENST00000556952 CXCL6P80162 114 aa13.63□□□□□ -0.23
SIX4-203ENST00000556952 SIGMAR1Q99720 223 aa13.61□□□□□ -0.23
SIX4-203ENST00000556952 Q96NJ1 140 aa13.6□□□□□ -0.23
SIX4-203ENST00000556952 IGKV3D-7A0A0C4DH55 119 aa13.59□□□□□ -0.23
SIX4-203ENST00000556952 MT-ATP8P03928 68 aa13.59□□□□□ -0.23
SIX4-203ENST00000556952 J3KT08 172 aa13.58□□□□□ -0.23
SIX4-203ENST00000556952 DEFB116Q30KQ4 102 aa13.55□□□□□ -0.24
SIX4-203ENST00000556952 HMCN2Q8NDA2 5059 aa13.53□□□□□ -0.24
SIX4-203ENST00000556952 IGKV4-1P06312 121 aa13.52□□□□□ -0.25
SIX4-203ENST00000556952 DSCR10P59022 87 aa13.51□□□□□ -0.25
SIX4-203ENST00000556952 IMUPQ9GZP8 106 aa13.51□□□□□ -0.25
SIX4-203ENST00000556952 C1orf195Q5TG92 126 aa13.5□□□□□ -0.25
SIX4-203ENST00000556952 A8MWP4 228 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms