RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 PRLHP81277 87 aa-0.97□□□□□ -2.56
LINC00871-203ENST00000556869 DEFA5Q01523 94 aa-0.97□□□□□ -2.56
LINC00871-203ENST00000556869 HTTP42858 3142 aa-0.97□□□□□ -2.56
LINC00871-203ENST00000556869 LRRK2Q5S007 2527 aa-0.97□□□□□ -2.57
LINC00871-203ENST00000556869 SNHG12Q9BXW3 62 aa-0.98□□□□□ -2.57
LINC00871-203ENST00000556869 WIZO95785 1651 aa-0.98□□□□□ -2.57
LINC00871-203ENST00000556869 PKD1L2Q7Z442 2459 aa-0.98□□□□□ -2.57
LINC00871-203ENST00000556869 CCDC168Q8NDH2 2452 aa-0.98□□□□□ -2.57
LINC00871-203ENST00000556869 ZZEF1O43149 2961 aa-0.99□□□□□ -2.57
LINC00871-203ENST00000556869 DMXL1Q9Y485 3027 aa-0.99□□□□□ -2.57
LINC00871-203ENST00000556869 GCN1Q92616 2671 aaKnown RBP-0.99□□□□□ -2.57
LINC00871-203ENST00000556869 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.99□□□□□ -2.57
LINC00871-203ENST00000556869 VPS13BQ7Z7G8 4022 aa-0.99□□□□□ -2.57
LINC00871-203ENST00000556869 DEPDC5O75140 1603 aa-0.99□□□□□ -2.57
LINC00871-203ENST00000556869 ACYP1P07311 99 aa-0.99□□□□□ -2.57
LINC00871-203ENST00000556869 DEFB110Q30KQ9 67 aa-0.99□□□□□ -2.57
LINC00871-203ENST00000556869 MAGI3Q5TCQ9 1506 aa-0.99□□□□□ -2.57
LINC00871-203ENST00000556869 CEBPZOSA8MTT3 80 aa-1□□□□□ -2.57
LINC00871-203ENST00000556869 H0YAA0 97 aa-1□□□□□ -2.57
LINC00871-203ENST00000556869 PKIAP61925 76 aa-1□□□□□ -2.57
LINC00871-203ENST00000556869 APOBP04114 4563 aaKnown RBP-1□□□□□ -2.57
LINC00871-203ENST00000556869 VPS8Q8N3P4 1428 aa-1□□□□□ -2.57
LINC00871-203ENST00000556869 NCOA2Q15596 1464 aa-1□□□□□ -2.57
LINC00871-203ENST00000556869 TMEM131LA2VDJ0 1609 aa-1□□□□□ -2.57
LINC00871-203ENST00000556869 S100A8P05109 93 aa-1.01□□□□□ -2.57
LINC00871-203ENST00000556869 IFI6P09912 130 aa-1.01□□□□□ -2.57
LINC00871-203ENST00000556869 SNRPFP62306 86 aaKnown RBP-1.01□□□□□ -2.57
LINC00871-203ENST00000556869 LAMA1P25391 3075 aa-1.01□□□□□ -2.57
LINC00871-203ENST00000556869 ZNF831Q5JPB2 1677 aa-1.01□□□□□ -2.57
LINC00871-203ENST00000556869 IFI27P40305 119 aaPredicted RBP-1.02□□□□□ -2.57
LINC00871-203ENST00000556869 URB2Q14146 1524 aaKnown RBP-1.02□□□□□ -2.57
LINC00871-203ENST00000556869 CEP290O15078 2479 aa-1.03□□□□□ -2.57
LINC00871-203ENST00000556869 DDX60LQ5H9U9 1706 aaKnown RBP-1.03□□□□□ -2.57
LINC00871-203ENST00000556869 LCE6AA0A183 80 aa-1.03□□□□□ -2.57
LINC00871-203ENST00000556869 IAPPP10997 89 aa-1.03□□□□□ -2.57
LINC00871-203ENST00000556869 LINC00643Q86TS7 51 aa-1.03□□□□□ -2.57
LINC00871-203ENST00000556869 DEFB106AQ8N104 65 aa-1.03□□□□□ -2.57
LINC00871-203ENST00000556869 Q9H521 79 aa-1.03□□□□□ -2.57
LINC00871-203ENST00000556869 RABAC1Q9UI14 185 aa-1.03□□□□□ -2.57
LINC00871-203ENST00000556869 ARFGEF2Q9Y6D5 1785 aa-1.03□□□□□ -2.58
LINC00871-203ENST00000556869 ACACBO00763 2458 aa-1.04□□□□□ -2.58
LINC00871-203ENST00000556869 LYNX1G3V0Z9 82 aa-1.04□□□□□ -2.58
LINC00871-203ENST00000556869 DEFB130BP0DP73 79 aa-1.04□□□□□ -2.58
LINC00871-203ENST00000556869 DEFB130AP0DP74 79 aa-1.04□□□□□ -2.58
LINC00871-203ENST00000556869 PYY3Q5JQD4 70 aa-1.04□□□□□ -2.58
LINC00871-203ENST00000556869 S100A16Q96FQ6 103 aaKnown RBP-1.04□□□□□ -2.58
LINC00871-203ENST00000556869 BIRC6Q9NR09 4857 aa-1.04□□□□□ -2.58
LINC00871-203ENST00000556869 DIP2BQ9P265 1576 aa-1.04□□□□□ -2.58
LINC00871-203ENST00000556869 DNAH2Q9P225 4427 aa-1.05□□□□□ -2.58
LINC00871-203ENST00000556869 PLECQ15149 4684 aaKnown RBP-1.05□□□□□ -2.58
LINC00871-203ENST00000556869 UMAD1C9J7I0 102 aa-1.05□□□□□ -2.58
LINC00871-203ENST00000556869 K7EP34 96 aa-1.05□□□□□ -2.58
LINC00871-203ENST00000556869 RNF213Q63HN8 5207 aa-1.06□□□□□ -2.58
LINC00871-203ENST00000556869 UTP20O75691 2785 aaKnown RBP-1.06□□□□□ -2.58
LINC00871-203ENST00000556869 PIK3C2BO00750 1634 aa-1.06□□□□□ -2.58
LINC00871-203ENST00000556869 MT1HP80294 61 aa-1.06□□□□□ -2.58
LINC00871-203ENST00000556869 CCNB3Q8WWL7 1395 aa-1.07□□□□□ -2.58
LINC00871-203ENST00000556869 KIF14Q15058 1648 aa-1.07□□□□□ -2.58
LINC00871-203ENST00000556869 NDUFA4O00483 81 aa-1.07□□□□□ -2.58
LINC00871-203ENST00000556869 ABCC3O15438 1527 aa-1.07□□□□□ -2.58
LINC00871-203ENST00000556869 CCDC88BA6NC98 1476 aa-1.07□□□□□ -2.58
LINC00871-203ENST00000556869 DSPP15924 2871 aaKnown RBP-1.07□□□□□ -2.58
LINC00871-203ENST00000556869 PLCH1Q4KWH8 1693 aa-1.07□□□□□ -2.58
LINC00871-203ENST00000556869 MAP3K4Q9Y6R4 1608 aa-1.07□□□□□ -2.58
LINC00871-203ENST00000556869 DEFB1P60022 68 aa-1.08□□□□□ -2.58
LINC00871-203ENST00000556869 ANKRD36CQ5JPF3 1778 aa-1.08□□□□□ -2.58
LINC00871-203ENST00000556869 NBEAL2Q6ZNJ1 2754 aa-1.09□□□□□ -2.58
LINC00871-203ENST00000556869 V9GYS6 101 aa-1.09□□□□□ -2.58
LINC00871-203ENST00000556869 ITSN1Q15811 1721 aa-1.09□□□□□ -2.58
LINC00871-203ENST00000556869 PVALEFA0A1B0GWK0 134 aa-1.1□□□□□ -2.59
LINC00871-203ENST00000556869 NREPQ16612 68 aa-1.1□□□□□ -2.59
LINC00871-203ENST00000556869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.1□□□□□ -2.59
LINC00871-203ENST00000556869 PPLO60437 1756 aa-1.11□□□□□ -2.59
LINC00871-203ENST00000556869 KANTRA0A1W2PQU2 76 aa-1.11□□□□□ -2.59
LINC00871-203ENST00000556869 RYR2Q92736 4967 aa-1.11□□□□□ -2.59
LINC00871-203ENST00000556869 NBEAQ8NFP9 2946 aa-1.12□□□□□ -2.59
LINC00871-203ENST00000556869 THOC2Q8NI27 1593 aaKnown RBP-1.12□□□□□ -2.59
LINC00871-203ENST00000556869 CFAP43Q8NDM7 1665 aa-1.12□□□□□ -2.59
LINC00871-203ENST00000556869 LAMA3Q16787 3333 aa-1.12□□□□□ -2.59
LINC00871-203ENST00000556869 ATP5EP2Q5VTU8 51 aa-1.12□□□□□ -2.59
LINC00871-203ENST00000556869 RICTORQ6R327 1708 aa-1.12□□□□□ -2.59
LINC00871-203ENST00000556869 DNAH1Q9P2D7 4330 aa-1.13□□□□□ -2.59
LINC00871-203ENST00000556869 A0A087WXM4 84 aa-1.13□□□□□ -2.59
LINC00871-203ENST00000556869 MRPL33O75394 65 aaKnown RBP-1.13□□□□□ -2.59
LINC00871-203ENST00000556869 KRTAP19-5Q3LI72 72 aa-1.13□□□□□ -2.59
LINC00871-203ENST00000556869 KALRNO60229 2985 aa-1.13□□□□□ -2.59
LINC00871-203ENST00000556869 PARP4Q9UKK3 1724 aaKnown RBP-1.14□□□□□ -2.59
LINC00871-203ENST00000556869 RIF1Q5UIP0 2472 aaKnown RBP-1.14□□□□□ -2.59
LINC00871-203ENST00000556869 DEFB131BA0A096LNP1 70 aa-1.14□□□□□ -2.59
LINC00871-203ENST00000556869 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.14□□□□□ -2.59
LINC00871-203ENST00000556869 KIAA0586Q9BVV6 1533 aa-1.15□□□□□ -2.59
LINC00871-203ENST00000556869 SACSQ9NZJ4 4579 aa-1.15□□□□□ -2.59
LINC00871-203ENST00000556869 ZC3H13Q5T200 1668 aaKnown RBP-1.15□□□□□ -2.59
LINC00871-203ENST00000556869 TTC37Q6PGP7 1564 aa-1.15□□□□□ -2.59
LINC00871-203ENST00000556869 A0A0C4DFX4 3053 aa-1.15□□□□□ -2.59
LINC00871-203ENST00000556869 WDR87Q6ZQQ6 2873 aa-1.15□□□□□ -2.59
LINC00871-203ENST00000556869 TLN2Q9Y4G6 2542 aa-1.16□□□□□ -2.59
LINC00871-203ENST00000556869 LAMA2P24043 3122 aaKnown RBP-1.16□□□□□ -2.6
LINC00871-203ENST00000556869 HFM1A2PYH4 1435 aa-1.16□□□□□ -2.6
LINC00871-203ENST00000556869 DNHD1Q96M86 4753 aa-1.16□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms