RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 SLC25A20O43772 301 aa4.18□□□□□ -1.74
SCFD1-222ENST00000556768 LINC01547P58512 204 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-222ENST00000556768 SMIM29Q86T20 159 aa4.18□□□□□ -1.74
SCFD1-222ENST00000556768 LAMTOR3Q9UHA4 124 aa4.18□□□□□ -1.74
SCFD1-222ENST00000556768 COX7BP24311 80 aa4.17□□□□□ -1.74
SCFD1-222ENST00000556768 TAL2Q16559 108 aa4.17□□□□□ -1.74
SCFD1-222ENST00000556768 TTTY13Q9BZ97 58 aa4.17□□□□□ -1.74
SCFD1-222ENST00000556768 S100A6P06703 90 aa4.16□□□□□ -1.74
SCFD1-222ENST00000556768 C6orf99Q4VX62 202 aa4.16□□□□□ -1.74
SCFD1-222ENST00000556768 ATOH7Q8N100 152 aa4.16□□□□□ -1.74
SCFD1-222ENST00000556768 TRAV13-2A0A0B4J235 113 aa4.16□□□□□ -1.74
SCFD1-222ENST00000556768 TRBV7-6A0A0J9YX20 115 aa4.16□□□□□ -1.74
SCFD1-222ENST00000556768 S100A1P23297 94 aa4.16□□□□□ -1.74
SCFD1-222ENST00000556768 ELOF1P60002 83 aaKnown RBP4.16□□□□□ -1.74
SCFD1-222ENST00000556768 ST20-AS1Q8NBB2 130 aa4.16□□□□□ -1.74
SCFD1-222ENST00000556768 DEFB105AQ8NG35 78 aa4.15□□□□□ -1.75
SCFD1-222ENST00000556768 TEX49A0A1B0GTD5 131 aa4.14□□□□□ -1.75
SCFD1-222ENST00000556768 A0A1B0GWB2 263 aa4.14□□□□□ -1.75
SCFD1-222ENST00000556768 VAMP3Q15836 100 aa4.14□□□□□ -1.75
SCFD1-222ENST00000556768 MUSTN1Q8IVN3 82 aa4.14□□□□□ -1.75
SCFD1-222ENST00000556768 LIMD2Q9BT23 127 aa4.14□□□□□ -1.75
SCFD1-222ENST00000556768 NHP2Q9NX24 153 aaKnown RBP4.14□□□□□ -1.75
SCFD1-222ENST00000556768 PCP2Q8IVA1 136 aa4.14□□□□□ -1.75
SCFD1-222ENST00000556768 Q8N377 158 aa4.14□□□□□ -1.75
SCFD1-222ENST00000556768 SPRR1BP22528 89 aa4.13□□□□□ -1.75
SCFD1-222ENST00000556768 IGKV2-30P06310 120 aa4.12□□□□□ -1.75
SCFD1-222ENST00000556768 HIST1H2BLQ99880 126 aa4.12□□□□□ -1.75
SCFD1-222ENST00000556768 PRO1933Q9H354 126 aa4.12□□□□□ -1.75
SCFD1-222ENST00000556768 Q1RN00 199 aa4.11□□□□□ -1.75
SCFD1-222ENST00000556768 KRTAP13-3Q3SY46 172 aa4.11□□□□□ -1.75
SCFD1-222ENST00000556768 HRCT1Q6UXD1 115 aa4.11□□□□□ -1.75
SCFD1-222ENST00000556768 HIST3H2BBQ8N257 126 aa4.11□□□□□ -1.75
SCFD1-222ENST00000556768 H7C2G1 150 aa4.1□□□□□ -1.75
SCFD1-222ENST00000556768 CD164Q04900 197 aa4.1□□□□□ -1.75
SCFD1-222ENST00000556768 F8WEM9 126 aa4.09□□□□□ -1.75
SCFD1-222ENST00000556768 SMIM11BQ8TCY0 68 aa4.09□□□□□ -1.75
SCFD1-222ENST00000556768 SNCGO76070 127 aa4.09□□□□□ -1.76
SCFD1-222ENST00000556768 ASB16-AS1Q495Z4 193 aa4.09□□□□□ -1.76
SCFD1-222ENST00000556768 HIST1H4GQ99525 98 aa4.09□□□□□ -1.76
SCFD1-222ENST00000556768 IGLV5-48A0A075B6I7 105 aa4.08□□□□□ -1.76
SCFD1-222ENST00000556768 FAT4Q6V0I7 4981 aa4.08□□□□□ -1.76
SCFD1-222ENST00000556768 NDUFV3P56181 108 aaKnown RBP4.07□□□□□ -1.76
SCFD1-222ENST00000556768 hADV29S1A0JD25 119 aa4.07□□□□□ -1.76
SCFD1-222ENST00000556768 TCL1BO95988 128 aa4.07□□□□□ -1.76
SCFD1-222ENST00000556768 BVES-AS1Q5T3Y7 98 aa4.07□□□□□ -1.76
SCFD1-222ENST00000556768 MUC17Q685J3 4493 aa4.05□□□□□ -1.76
SCFD1-222ENST00000556768 LINC00575Q6W349 94 aa4.05□□□□□ -1.76
SCFD1-222ENST00000556768 OCR1Q9BZK8 76 aa4.05□□□□□ -1.76
SCFD1-222ENST00000556768 COX8AP10176 69 aa4.05□□□□□ -1.76
SCFD1-222ENST00000556768 Q5XG85 94 aa4.05□□□□□ -1.76
SCFD1-222ENST00000556768 NOTCH2NLQ7Z3S9 236 aa4.05□□□□□ -1.76
SCFD1-222ENST00000556768 SNHG12Q9BXW3 62 aa4.05□□□□□ -1.76
SCFD1-222ENST00000556768 Q6JHZ5 121 aa4.04□□□□□ -1.76
SCFD1-222ENST00000556768 Q6ZQY7 126 aa4.04□□□□□ -1.76
SCFD1-222ENST00000556768 RAB37Q96AX2 223 aa4.04□□□□□ -1.76
SCFD1-222ENST00000556768 KRTAP9-3Q9BYQ3 159 aa4.04□□□□□ -1.76
SCFD1-222ENST00000556768 C9orf92A6NGG3 77 aa4.03□□□□□ -1.76
SCFD1-222ENST00000556768 DLEU1O43261 78 aa4.03□□□□□ -1.76
SCFD1-222ENST00000556768 MTURNQ8N3F0 131 aa4.03□□□□□ -1.76
SCFD1-222ENST00000556768 C12orf57Q99622 126 aa4.03□□□□□ -1.76
SCFD1-222ENST00000556768 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-222ENST00000556768 PPDPFLQ8WWR9 84 aa4.02□□□□□ -1.77
SCFD1-222ENST00000556768 C14orf144Q96I85 54 aa4.02□□□□□ -1.77
SCFD1-222ENST00000556768 VAMP8Q9BV40 100 aa4.02□□□□□ -1.77
SCFD1-222ENST00000556768 H0YGX0 51 aa4.01□□□□□ -1.77
SCFD1-222ENST00000556768 SPATA45Q537H7 98 aa4.01□□□□□ -1.77
SCFD1-222ENST00000556768 OCIAD2Q56VL3 154 aa4.01□□□□□ -1.77
SCFD1-222ENST00000556768 C1orf195Q5TG92 126 aa4.01□□□□□ -1.77
SCFD1-222ENST00000556768 CLEC2BQ92478 149 aa4.01□□□□□ -1.77
SCFD1-222ENST00000556768 A0A0G2JQZ4 141 aa4□□□□□ -1.77
SCFD1-222ENST00000556768 HIGD1BQ9P298 99 aa4□□□□□ -1.77
SCFD1-222ENST00000556768 CFC1BP0CG36 223 aa4□□□□□ -1.77
SCFD1-222ENST00000556768 CFC1P0CG37 223 aa4□□□□□ -1.77
SCFD1-222ENST00000556768 IGLV8-61A0A075B6I0 122 aa3.99□□□□□ -1.77
SCFD1-222ENST00000556768 PCOTHQ58A44 107 aa3.99□□□□□ -1.77
SCFD1-222ENST00000556768 A0A0B4J2C4 111 aa3.98□□□□□ -1.77
SCFD1-222ENST00000556768 TRBV7-7A0A0K0K1E9 115 aa3.98□□□□□ -1.77
SCFD1-222ENST00000556768 IGFL1Q6UW32 110 aa3.98□□□□□ -1.77
SCFD1-222ENST00000556768 PRO1854Q9UHT4 67 aa3.98□□□□□ -1.77
SCFD1-222ENST00000556768 LST1O00453 97 aa3.97□□□□□ -1.77
SCFD1-222ENST00000556768 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
SCFD1-222ENST00000556768 CEND1Q8N111 149 aa3.97□□□□□ -1.77
SCFD1-222ENST00000556768 SS18L2Q9UHA2 77 aa3.97□□□□□ -1.77
SCFD1-222ENST00000556768 A0A1B0GX51 115 aa3.96□□□□□ -1.78
SCFD1-222ENST00000556768 Q8N9P0 234 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-222ENST00000556768 IGKV2D-30A0A075B6S6 120 aa3.95□□□□□ -1.78
SCFD1-222ENST00000556768 DNAL4O96015 105 aa3.95□□□□□ -1.78
SCFD1-222ENST00000556768 FABP2P12104 132 aa3.95□□□□□ -1.78
SCFD1-222ENST00000556768 KRTAP4-1Q9BYQ7 146 aa3.95□□□□□ -1.78
SCFD1-222ENST00000556768 H3BMG7 143 aa3.95□□□□□ -1.78
SCFD1-222ENST00000556768 H3BUT2 72 aa3.95□□□□□ -1.78
SCFD1-222ENST00000556768 COX6CP09669 75 aa3.95□□□□□ -1.78
SCFD1-222ENST00000556768 TEN1Q86WV5 123 aa3.95□□□□□ -1.78
SCFD1-222ENST00000556768 H3BQ85 93 aa3.94□□□□□ -1.78
SCFD1-222ENST00000556768 PSMB2P49721 201 aa3.94□□□□□ -1.78
SCFD1-222ENST00000556768 RPL37P61927 97 aaKnown RBP3.94□□□□□ -1.78
SCFD1-222ENST00000556768 ATP11AUNQ6ZP68 121 aa3.94□□□□□ -1.78
SCFD1-222ENST00000556768 C2orf91Q6ZV80 131 aa3.94□□□□□ -1.78
SCFD1-222ENST00000556768 Q6Q795 121 aa3.93□□□□□ -1.78
SCFD1-222ENST00000556768 OBSCN-AS1Q96MR7 158 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms