RNA–Protein interactions for RNA: ENST00000556725.1

SYNE2-222, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 672 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-222ENST00000556725 TRAPPC1Q9Y5R8 145 aa4.43□□□□□ -1.7
SYNE2-222ENST00000556725 LEPROTO15243 131 aa4.42□□□□□ -1.7
SYNE2-222ENST00000556725 HINT1P49773 126 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-222ENST00000556725 TAL2Q16559 108 aa4.42□□□□□ -1.7
SYNE2-222ENST00000556725 MT1FP04733 61 aa4.41□□□□□ -1.7
SYNE2-222ENST00000556725 ADAMTSL4-AS1Q5T5F5 129 aa4.41□□□□□ -1.7
SYNE2-222ENST00000556725 DHRS4-AS1Q9P1J3 65 aa4.41□□□□□ -1.7
SYNE2-222ENST00000556725 H0Y8G0 127 aa4.39□□□□□ -1.71
SYNE2-222ENST00000556725 J3QQQ9 107 aa4.39□□□□□ -1.71
SYNE2-222ENST00000556725 ATP11AUNQ6ZP68 121 aa4.39□□□□□ -1.71
SYNE2-222ENST00000556725 OR13C6PQ8NH95 151 aa4.39□□□□□ -1.71
SYNE2-222ENST00000556725 HIST1H2BLQ99880 126 aa4.39□□□□□ -1.71
SYNE2-222ENST00000556725 TEX49A0A1B0GTD5 131 aa4.38□□□□□ -1.71
SYNE2-222ENST00000556725 C20orf202A1L168 122 aa4.38□□□□□ -1.71
SYNE2-222ENST00000556725 FABP4P15090 132 aa4.38□□□□□ -1.71
SYNE2-222ENST00000556725 MPLKIPQ8TAP9 179 aa4.38□□□□□ -1.71
SYNE2-222ENST00000556725 COX7BP24311 80 aa4.37□□□□□ -1.71
SYNE2-222ENST00000556725 ELOF1P60002 83 aaKnown RBP4.37□□□□□ -1.71
SYNE2-222ENST00000556725 PYY3Q5JQD4 70 aa4.37□□□□□ -1.71
SYNE2-222ENST00000556725 Q75L30 129 aa4.37□□□□□ -1.71
SYNE2-222ENST00000556725 PCP2Q8IVA1 136 aa4.37□□□□□ -1.71
SYNE2-222ENST00000556725 OBSCN-AS1Q96MR7 158 aa4.37□□□□□ -1.71
SYNE2-222ENST00000556725 A0A0J9YXY3 114 aa4.36□□□□□ -1.71
SYNE2-222ENST00000556725 TSTD3H0UI37 97 aa4.36□□□□□ -1.71
SYNE2-222ENST00000556725 KRTAP10-10P60014 251 aa4.36□□□□□ -1.71
SYNE2-222ENST00000556725 C6orf99Q4VX62 202 aa4.36□□□□□ -1.71
SYNE2-222ENST00000556725 CBY1Q9Y3M2 126 aa4.36□□□□□ -1.71
SYNE2-222ENST00000556725 SERF1AO75920 110 aa4.35□□□□□ -1.71
SYNE2-222ENST00000556725 TCL1BO95988 128 aa4.35□□□□□ -1.71
SYNE2-222ENST00000556725 LGALS3P17931 250 aaKnown RBP4.35□□□□□ -1.71
SYNE2-222ENST00000556725 NMUP48645 174 aa4.35□□□□□ -1.71
SYNE2-222ENST00000556725 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
SYNE2-222ENST00000556725 CHCHD1Q96BP2 118 aaKnown RBP4.35□□□□□ -1.71
SYNE2-222ENST00000556725 PMCHL2Q9BQD1 86 aa4.34□□□□□ -1.71
SYNE2-222ENST00000556725 IGLV5-48A0A075B6I7 105 aa4.33□□□□□ -1.72
SYNE2-222ENST00000556725 HSBP1O75506 76 aa4.33□□□□□ -1.72
SYNE2-222ENST00000556725 KRTAP19-6Q3LI70 58 aa4.33□□□□□ -1.72
SYNE2-222ENST00000556725 LINC00308Q8TCZ7 52 aa4.33□□□□□ -1.72
SYNE2-222ENST00000556725 LITAFQ99732 161 aa4.33□□□□□ -1.72
SYNE2-222ENST00000556725 SPANXCQ9NY87 97 aa4.33□□□□□ -1.72
SYNE2-222ENST00000556725 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
SYNE2-222ENST00000556725 HERVK_113P61574 105 aa4.32□□□□□ -1.72
SYNE2-222ENST00000556725 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
SYNE2-222ENST00000556725 SPANXDQ9BXN6 97 aa4.32□□□□□ -1.72
SYNE2-222ENST00000556725 TRBV20-1A0A075B6N2 111 aa4.31□□□□□ -1.72
SYNE2-222ENST00000556725 PCP4L1A6NKN8 68 aa4.31□□□□□ -1.72
SYNE2-222ENST00000556725 DPM2O94777 84 aa4.31□□□□□ -1.72
SYNE2-222ENST00000556725 PLNP26678 52 aa4.31□□□□□ -1.72
SYNE2-222ENST00000556725 Q96NJ1 140 aa4.31□□□□□ -1.72
SYNE2-222ENST00000556725 LEPROTL1O95214 131 aa4.3□□□□□ -1.72
SYNE2-222ENST00000556725 SCGB1D1O95968 90 aa4.3□□□□□ -1.72
SYNE2-222ENST00000556725 IGKCP01834 107 aa4.3□□□□□ -1.72
SYNE2-222ENST00000556725 LINC00846Q9NV44 126 aa4.3□□□□□ -1.72
SYNE2-222ENST00000556725 HSPB8Q9UJY1 196 aa4.3□□□□□ -1.72
SYNE2-222ENST00000556725 TRBV7-6A0A0J9YX20 115 aa4.29□□□□□ -1.72
SYNE2-222ENST00000556725 IGKV2-30P06310 120 aa4.29□□□□□ -1.72
SYNE2-222ENST00000556725 VAMP8Q9BV40 100 aa4.29□□□□□ -1.72
SYNE2-222ENST00000556725 KRTAP16-1A8MUX0 517 aa4.28□□□□□ -1.72
SYNE2-222ENST00000556725 E9PLD3 99 aa4.28□□□□□ -1.72
SYNE2-222ENST00000556725 C3orf79P0CE67 100 aa4.28□□□□□ -1.72
SYNE2-222ENST00000556725 KRTDAPP60985 99 aa4.28□□□□□ -1.72
SYNE2-222ENST00000556725 PET117Q6UWS5 81 aa4.28□□□□□ -1.72
SYNE2-222ENST00000556725 C20orf166-AS1Q96NR2 134 aa4.28□□□□□ -1.72
SYNE2-222ENST00000556725 TRBV7-7A0A0K0K1E9 115 aa4.27□□□□□ -1.73
SYNE2-222ENST00000556725 FAM236DA0A1B0GTK5 79 aa4.27□□□□□ -1.73
SYNE2-222ENST00000556725 A0A1B0GWB2 263 aa4.27□□□□□ -1.73
SYNE2-222ENST00000556725 A8MUU9 505 aa4.27□□□□□ -1.73
SYNE2-222ENST00000556725 FAM236CP0DP71 79 aa4.27□□□□□ -1.73
SYNE2-222ENST00000556725 IGFL1Q6UW32 110 aa4.27□□□□□ -1.73
SYNE2-222ENST00000556725 TIMM17BO60830 172 aa4.26□□□□□ -1.73
SYNE2-222ENST00000556725 SYS1-DBNDD2H3BUS1 97 aa4.25□□□□□ -1.73
SYNE2-222ENST00000556725 TTTY13Q9BZ97 58 aa4.25□□□□□ -1.73
SYNE2-222ENST00000556725 UQCR10Q9UDW1 63 aa4.25□□□□□ -1.73
SYNE2-222ENST00000556725 HSBP1L1C9JCN9 74 aa4.24□□□□□ -1.73
SYNE2-222ENST00000556725 SPATA45Q537H7 98 aa4.24□□□□□ -1.73
SYNE2-222ENST00000556725 LINC01545Q5VT33 79 aa4.24□□□□□ -1.73
SYNE2-222ENST00000556725 C14orf144Q96I85 54 aa4.24□□□□□ -1.73
SYNE2-222ENST00000556725 A6NDN8 102 aa4.23□□□□□ -1.73
SYNE2-222ENST00000556725 F8WEM9 126 aa4.23□□□□□ -1.73
SYNE2-222ENST00000556725 PAM16Q9Y3D7 125 aa4.23□□□□□ -1.73
SYNE2-222ENST00000556725 ZNF815PA8K554 130 aa4.22□□□□□ -1.73
SYNE2-222ENST00000556725 M0R143 59 aa4.22□□□□□ -1.73
SYNE2-222ENST00000556725 LST1O00453 97 aa4.22□□□□□ -1.73
SYNE2-222ENST00000556725 HRES1P13985 223 aa4.22□□□□□ -1.73
SYNE2-222ENST00000556725 Q6JHZ5 121 aa4.22□□□□□ -1.73
SYNE2-222ENST00000556725 Q8N9P0 234 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-222ENST00000556725 CLEC2BQ92478 149 aa4.22□□□□□ -1.73
SYNE2-222ENST00000556725 A4D1N5 150 aa4.21□□□□□ -1.74
SYNE2-222ENST00000556725 OCIAD2Q56VL3 154 aa4.21□□□□□ -1.74
SYNE2-222ENST00000556725 SMIM11BQ8TCY0 68 aa4.21□□□□□ -1.74
SYNE2-222ENST00000556725 DSCR10P59022 87 aa4.2□□□□□ -1.74
SYNE2-222ENST00000556725 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
SYNE2-222ENST00000556725 NHP2Q9NX24 153 aaKnown RBP4.2□□□□□ -1.74
SYNE2-222ENST00000556725 RBM12B-AS1Q9P1G2 102 aa4.2□□□□□ -1.74
SYNE2-222ENST00000556725 TRAV13-2A0A0B4J235 113 aa4.19□□□□□ -1.74
SYNE2-222ENST00000556725 DLEU1O43261 78 aa4.19□□□□□ -1.74
SYNE2-222ENST00000556725 LINC00575Q6W349 94 aa4.19□□□□□ -1.74
SYNE2-222ENST00000556725 Q6ZQY7 126 aa4.19□□□□□ -1.74
SYNE2-222ENST00000556725 NOTCH2NLQ7Z3S9 236 aa4.19□□□□□ -1.74
SYNE2-222ENST00000556725 NEBP20929 6669 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms