RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 A0A1B0GW54 56 aa5.18□□□□□ -1.58
ATXN3-235ENST00000556082 KRTAP29-1A8MX34 341 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-235ENST00000556082 Q6JHZ5 121 aa5.18□□□□□ -1.58
ATXN3-235ENST00000556082 RTL8CO15255 209 aa5.17□□□□□ -1.58
ATXN3-235ENST00000556082 LY6G6CO95867 125 aa5.17□□□□□ -1.58
ATXN3-235ENST00000556082 UBE2BP63146 152 aa5.17□□□□□ -1.58
ATXN3-235ENST00000556082 ATP5EP2Q5VTU8 51 aa5.17□□□□□ -1.58
ATXN3-235ENST00000556082 PHF5AQ7RTV0 110 aaKnown RBP5.17□□□□□ -1.58
ATXN3-235ENST00000556082 A0A1B0GV72 72 aa5.16□□□□□ -1.58
ATXN3-235ENST00000556082 ERC2-IT1O76042 136 aa5.16□□□□□ -1.58
ATXN3-235ENST00000556082 KRTAP11-1Q8IUC1 163 aa5.16□□□□□ -1.58
ATXN3-235ENST00000556082 UBL5Q9BZL1 73 aa5.16□□□□□ -1.58
ATXN3-235ENST00000556082 DNAH10Q8IVF4 4471 aa5.15□□□□□ -1.58
ATXN3-235ENST00000556082 PANO1I0J062 215 aa5.15□□□□□ -1.59
ATXN3-235ENST00000556082 BCE1O60756 84 aa5.15□□□□□ -1.59
ATXN3-235ENST00000556082 SPRR1BP22528 89 aa5.15□□□□□ -1.59
ATXN3-235ENST00000556082 FAM19A1Q7Z5A9 133 aa5.15□□□□□ -1.59
ATXN3-235ENST00000556082 ST20-AS1Q8NBB2 130 aa5.15□□□□□ -1.59
ATXN3-235ENST00000556082 DEFB105AQ8NG35 78 aa5.15□□□□□ -1.59
ATXN3-235ENST00000556082 LYSTQ99698 3801 aa5.15□□□□□ -1.59
ATXN3-235ENST00000556082 PLAC8Q9NZF1 115 aa5.15□□□□□ -1.59
ATXN3-235ENST00000556082 IGLV5-52A0A0A0MRZ9 124 aa5.14□□□□□ -1.59
ATXN3-235ENST00000556082 DPH3Q96FX2 82 aa5.14□□□□□ -1.59
ATXN3-235ENST00000556082 IGLV8-61A0A075B6I0 122 aa5.13□□□□□ -1.59
ATXN3-235ENST00000556082 PRLHP81277 87 aa5.13□□□□□ -1.59
ATXN3-235ENST00000556082 SMIM29Q86T20 159 aa5.13□□□□□ -1.59
ATXN3-235ENST00000556082 KRTAP13-1Q8IUC0 172 aa5.13□□□□□ -1.59
ATXN3-235ENST00000556082 Q8N9P0 234 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-235ENST00000556082 DNAH6Q9C0G6 4158 aa5.12□□□□□ -1.59
ATXN3-235ENST00000556082 UBE2AP49459 152 aa5.11□□□□□ -1.59
ATXN3-235ENST00000556082 CXCL6P80162 114 aa5.11□□□□□ -1.59
ATXN3-235ENST00000556082 Q6ZVQ6 151 aa5.11□□□□□ -1.59
ATXN3-235ENST00000556082 IGKV3D-7A0A0C4DH55 119 aa5.1□□□□□ -1.59
ATXN3-235ENST00000556082 FUSP35637 526 aaKnown RBP eCLIP5.1□□□□□ -1.59
ATXN3-235ENST00000556082 HIST1H4AP62805 103 aaKnown RBP5.1□□□□□ -1.59
ATXN3-235ENST00000556082 C1orf137Q5JT78 98 aa5.1□□□□□ -1.59
ATXN3-235ENST00000556082 Q8NBF4 154 aa5.1□□□□□ -1.59
ATXN3-235ENST00000556082 SPRR4Q96PI1 79 aa5.1□□□□□ -1.59
ATXN3-235ENST00000556082 HIGD2AQ9BW72 106 aa5.1□□□□□ -1.59
ATXN3-235ENST00000556082 F8WEM9 126 aa5.09□□□□□ -1.59
ATXN3-235ENST00000556082 C3orf22Q8N5N4 141 aa5.09□□□□□ -1.59
ATXN3-235ENST00000556082 DNAH17Q9UFH2 4485 aa5.08□□□□□ -1.6
ATXN3-235ENST00000556082 A0A1W2PNM2 257 aa5.08□□□□□ -1.6
ATXN3-235ENST00000556082 CRYGAP11844 174 aa5.08□□□□□ -1.6
ATXN3-235ENST00000556082 ANAPC13Q9BS18 74 aa5.08□□□□□ -1.6
ATXN3-235ENST00000556082 ALMS1Q8TCU4 4167 aa5.08□□□□□ -1.6
ATXN3-235ENST00000556082 DNAH2Q9P225 4427 aa5.08□□□□□ -1.6
ATXN3-235ENST00000556082 LCE1AQ5T7P2 110 aa5.07□□□□□ -1.6
ATXN3-235ENST00000556082 KMT2AQ03164 3969 aa5.06□□□□□ -1.6
ATXN3-235ENST00000556082 FAM236AA0A1B0GUQ0 79 aa5.06□□□□□ -1.6
ATXN3-235ENST00000556082 FAM236BA0A1B0GV22 79 aa5.06□□□□□ -1.6
ATXN3-235ENST00000556082 HAMPP81172 84 aa5.06□□□□□ -1.6
ATXN3-235ENST00000556082 NREPQ16612 68 aa5.06□□□□□ -1.6
ATXN3-235ENST00000556082 LINC00483Q53H64 154 aa5.06□□□□□ -1.6
ATXN3-235ENST00000556082 Q6ZSA8 131 aa5.06□□□□□ -1.6
ATXN3-235ENST00000556082 PSORS1C2Q9UIG4 136 aa5.06□□□□□ -1.6
ATXN3-235ENST00000556082 ZNF706Q9Y5V0 76 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-235ENST00000556082 ZNF861PO60384 105 aa5.05□□□□□ -1.6
ATXN3-235ENST00000556082 RPL37AP61513 92 aaKnown RBP5.05□□□□□ -1.6
ATXN3-235ENST00000556082 IGFL1Q6UW32 110 aa5.05□□□□□ -1.6
ATXN3-235ENST00000556082 TGP01266 2768 aa5.05□□□□□ -1.6
ATXN3-235ENST00000556082 ATOX1O00244 68 aa5.04□□□□□ -1.6
ATXN3-235ENST00000556082 HECTD4Q9Y4D8 3996 aa5.04□□□□□ -1.6
ATXN3-235ENST00000556082 LCE6AA0A183 80 aa5.02□□□□□ -1.61
ATXN3-235ENST00000556082 BPY2O14599 106 aa5.02□□□□□ -1.61
ATXN3-235ENST00000556082 LINC00336Q6ZUF6 198 aa5.02□□□□□ -1.61
ATXN3-235ENST00000556082 A0A087WVE0 104 aa5.01□□□□□ -1.61
ATXN3-235ENST00000556082 IGLV7-43P04211 117 aa5.01□□□□□ -1.61
ATXN3-235ENST00000556082 KRTAP10-1P60331 282 aa5.01□□□□□ -1.61
ATXN3-235ENST00000556082 CIRBP-AS1Q8TBR5 109 aa5.01□□□□□ -1.61
ATXN3-235ENST00000556082 SCXQ7RTU7 201 aa4.99□□□□□ -1.61
ATXN3-235ENST00000556082 SMIM20Q8N5G0 67 aa4.99□□□□□ -1.61
ATXN3-235ENST00000556082 SERP2Q8N6R1 65 aa4.99□□□□□ -1.61
ATXN3-235ENST00000556082 UQCRQO14949 82 aa4.98□□□□□ -1.61
ATXN3-235ENST00000556082 IGKV4-1P06312 121 aa4.98□□□□□ -1.61
ATXN3-235ENST00000556082 COX7CP15954 63 aa4.98□□□□□ -1.61
ATXN3-235ENST00000556082 DNAH11Q96DT5 4516 aa4.98□□□□□ -1.61
ATXN3-235ENST00000556082 DNAH8Q96JB1 4490 aa4.97□□□□□ -1.61
ATXN3-235ENST00000556082 CCDC179H3BU77 68 aa4.97□□□□□ -1.61
ATXN3-235ENST00000556082 A0A087WSZ3 146 aa4.96□□□□□ -1.62
ATXN3-235ENST00000556082 A0A0G2JQZ4 141 aa4.96□□□□□ -1.62
ATXN3-235ENST00000556082 DSCR10P59022 87 aa4.96□□□□□ -1.62
ATXN3-235ENST00000556082 FRAS1Q86XX4 4008 aa4.95□□□□□ -1.62
ATXN3-235ENST00000556082 TRAV7A0A075B6U4 112 aa4.95□□□□□ -1.62
ATXN3-235ENST00000556082 LINC00472Q9H8W2 130 aa4.95□□□□□ -1.62
ATXN3-235ENST00000556082 IGKV2-30P06310 120 aa4.94□□□□□ -1.62
ATXN3-235ENST00000556082 SSBP3-AS1Q7Z2R9 100 aa4.94□□□□□ -1.62
ATXN3-235ENST00000556082 DNAH5Q8TE73 4624 aa4.93□□□□□ -1.62
ATXN3-235ENST00000556082 IGLV9-49A0A0B4J1Y8 123 aa4.93□□□□□ -1.62
ATXN3-235ENST00000556082 A0A1B0GVY2 172 aa4.93□□□□□ -1.62
ATXN3-235ENST00000556082 J3KT08 172 aa4.93□□□□□ -1.62
ATXN3-235ENST00000556082 CD164Q04900 197 aa4.93□□□□□ -1.62
ATXN3-235ENST00000556082 FAM229BQ4G0N7 80 aa4.93□□□□□ -1.62
ATXN3-235ENST00000556082 C9orf153Q5TBE3 101 aa4.93□□□□□ -1.62
ATXN3-235ENST00000556082 Q8N9L7 120 aa4.93□□□□□ -1.62
ATXN3-235ENST00000556082 SRRM2Q9UQ35 2752 aaKnown RBP4.93□□□□□ -1.62
ATXN3-235ENST00000556082 FAT2Q9NYQ8 4349 aa4.93□□□□□ -1.62
ATXN3-235ENST00000556082 SS18L2Q9UHA2 77 aa4.92□□□□□ -1.62
ATXN3-235ENST00000556082 PKD1P98161 4303 aa4.92□□□□□ -1.62
ATXN3-235ENST00000556082 MOBPQ13875 183 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms