RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ETDCA0A1B0GVM5 59 aa10.97□□□□□ -0.65
SHOX-204ENST00000554971 VPS13BQ7Z7G8 4022 aa10.96□□□□□ -0.65
SHOX-204ENST00000554971 Q8N377 158 aa10.96□□□□□ -0.65
SHOX-204ENST00000554971 FAM30AQ9NZY2 134 aa10.96□□□□□ -0.65
SHOX-204ENST00000554971 MRPL55Q7Z7F7 128 aaKnown RBP10.96□□□□□ -0.66
SHOX-204ENST00000554971 HERC2O95714 4834 aa10.94□□□□□ -0.66
SHOX-204ENST00000554971 Q6ZSA8 131 aa10.93□□□□□ -0.66
SHOX-204ENST00000554971 PANO1I0J062 215 aa10.92□□□□□ -0.66
SHOX-204ENST00000554971 TRAV7A0A075B6U4 112 aa10.92□□□□□ -0.66
SHOX-204ENST00000554971 RPL37AP8A6NKH3 93 aa10.92□□□□□ -0.66
SHOX-204ENST00000554971 KRTAP7-1Q8IUC3 87 aa10.92□□□□□ -0.66
SHOX-204ENST00000554971 FAM168BA1KXE4 195 aa10.91□□□□□ -0.66
SHOX-204ENST00000554971 Q9BRP9 147 aa10.91□□□□□ -0.66
SHOX-204ENST00000554971 TMEM258P61165 79 aa10.9□□□□□ -0.66
SHOX-204ENST00000554971 NREPQ16612 68 aa10.9□□□□□ -0.67
SHOX-204ENST00000554971 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.9□□□□□ -0.67
SHOX-204ENST00000554971 CHTF8P0CG12 524 aa10.88□□□□□ -0.67
SHOX-204ENST00000554971 REG3GQ6UW15 175 aa10.88□□□□□ -0.67
SHOX-204ENST00000554971 DEFB105AQ8NG35 78 aa10.88□□□□□ -0.67
SHOX-204ENST00000554971 PKIGQ9Y2B9 76 aa10.88□□□□□ -0.67
SHOX-204ENST00000554971 SRRM2Q9UQ35 2752 aaKnown RBP10.88□□□□□ -0.67
SHOX-204ENST00000554971 SVIPQ8NHG7 77 aa10.88□□□□□ -0.67
SHOX-204ENST00000554971 A0A096LNI7 61 aa10.87□□□□□ -0.67
SHOX-204ENST00000554971 FAM19A5Q7Z5A7 132 aaPredicted RBP10.87□□□□□ -0.67
SHOX-204ENST00000554971 RPS28P62857 69 aaKnown RBP10.86□□□□□ -0.67
SHOX-204ENST00000554971 CDK2AP2O75956 126 aa10.86□□□□□ -0.67
SHOX-204ENST00000554971 KRTAP17-1Q9BYP8 105 aa10.84□□□□□ -0.67
SHOX-204ENST00000554971 IGKV2-24A0A0C4DH68 120 aa10.84□□□□□ -0.67
SHOX-204ENST00000554971 SPACA4Q8TDM5 124 aa10.84□□□□□ -0.67
SHOX-204ENST00000554971 SCXQ7RTU7 201 aa10.83□□□□□ -0.68
SHOX-204ENST00000554971 UBE2BP63146 152 aa10.82□□□□□ -0.68
SHOX-204ENST00000554971 C1orf137Q5JT78 98 aa10.82□□□□□ -0.68
SHOX-204ENST00000554971 BPY2O14599 106 aa10.82□□□□□ -0.68
SHOX-204ENST00000554971 CIRBP-AS1Q8TBR5 109 aa10.82□□□□□ -0.68
SHOX-204ENST00000554971 Q8NBF4 154 aa10.81□□□□□ -0.68
SHOX-204ENST00000554971 SPRR4Q96PI1 79 aa10.81□□□□□ -0.68
SHOX-204ENST00000554971 J3KT08 172 aa10.8□□□□□ -0.68
SHOX-204ENST00000554971 ST20-AS1Q8NBB2 130 aa10.79□□□□□ -0.68
SHOX-204ENST00000554971 A0A1W2PNM2 257 aa10.78□□□□□ -0.68
SHOX-204ENST00000554971 CYSTM1Q9H1C7 97 aa10.78□□□□□ -0.68
SHOX-204ENST00000554971 ERC2-IT1O76042 136 aa10.78□□□□□ -0.68
SHOX-204ENST00000554971 KLKP1Q107X0 134 aa10.78□□□□□ -0.68
SHOX-204ENST00000554971 IGKV4-1P06312 121 aa10.77□□□□□ -0.69
SHOX-204ENST00000554971 F8WEM9 126 aa10.76□□□□□ -0.69
SHOX-204ENST00000554971 H0Y9J4 135 aa10.76□□□□□ -0.69
SHOX-204ENST00000554971 C20orf197Q8N268 126 aa10.76□□□□□ -0.69
SHOX-204ENST00000554971 ABCA13Q86UQ4 5058 aa10.76□□□□□ -0.69
SHOX-204ENST00000554971 PLAC8Q9NZF1 115 aa10.75□□□□□ -0.69
SHOX-204ENST00000554971 LINC00474Q9P2X8 69 aa10.75□□□□□ -0.69
SHOX-204ENST00000554971 IGLV8-61A0A075B6I0 122 aa10.74□□□□□ -0.69
SHOX-204ENST00000554971 A0A1W2PNN7 141 aa10.74□□□□□ -0.69
SHOX-204ENST00000554971 SMR3BP02814 79 aaPredicted RBP10.74□□□□□ -0.69
SHOX-204ENST00000554971 SMIM29Q86T20 159 aa10.74□□□□□ -0.69
SHOX-204ENST00000554971 EPM2AB3EWF7 344 aa10.73□□□□□ -0.69
SHOX-204ENST00000554971 NDUFC1O43677 76 aa10.73□□□□□ -0.69
SHOX-204ENST00000554971 DPH3Q96FX2 82 aa10.73□□□□□ -0.69
SHOX-204ENST00000554971 MYCBP2O75592 4640 aa10.69□□□□□ -0.7
SHOX-204ENST00000554971 SPRR1BP22528 89 aa10.68□□□□□ -0.7
SHOX-204ENST00000554971 H7BZZ5 65 aa10.67□□□□□ -0.7
SHOX-204ENST00000554971 PKHD1L1Q86WI1 4243 aa10.67□□□□□ -0.7
SHOX-204ENST00000554971 Q8N1X5 172 aa10.66□□□□□ -0.7
SHOX-204ENST00000554971 KRTAP4-5Q9BYR2 181 aa10.66□□□□□ -0.7
SHOX-204ENST00000554971 OCR1Q9BZK8 76 aa10.66□□□□□ -0.7
SHOX-204ENST00000554971 Q8N9L7 120 aa10.65□□□□□ -0.7
SHOX-204ENST00000554971 PCLOQ9Y6V0 5065 aa10.65□□□□□ -0.7
SHOX-204ENST00000554971 PRLHP81277 87 aa10.64□□□□□ -0.71
SHOX-204ENST00000554971 FAM236DA0A1B0GTK5 79 aa10.64□□□□□ -0.71
SHOX-204ENST00000554971 FAM236CP0DP71 79 aa10.64□□□□□ -0.71
SHOX-204ENST00000554971 IGFL1Q6UW32 110 aa10.64□□□□□ -0.71
SHOX-204ENST00000554971 PHF5AQ7RTV0 110 aaKnown RBP10.64□□□□□ -0.71
SHOX-204ENST00000554971 HIGD2AQ9BW72 106 aa10.64□□□□□ -0.71
SHOX-204ENST00000554971 KRTAP10-4P60372 401 aaPredicted RBP10.62□□□□□ -0.71
SHOX-204ENST00000554971 FLG2Q5D862 2391 aaPredicted RBP10.62□□□□□ -0.71
SHOX-204ENST00000554971 UBE2AP49459 152 aa10.62□□□□□ -0.71
SHOX-204ENST00000554971 Q5VSD8 79 aa10.62□□□□□ -0.71
SHOX-204ENST00000554971 KRTAP11-1Q8IUC1 163 aa10.62□□□□□ -0.71
SHOX-204ENST00000554971 TMEM254Q8TBM7 123 aa10.62□□□□□ -0.71
SHOX-204ENST00000554971 ATP5EP56381 51 aaPredicted RBP10.61□□□□□ -0.71
SHOX-204ENST00000554971 LRP1Q07954 4544 aaKnown RBP10.6□□□□□ -0.71
SHOX-204ENST00000554971 DSCR10P59022 87 aa10.6□□□□□ -0.71
SHOX-204ENST00000554971 SNURFQ9Y675 71 aa10.58□□□□□ -0.72
SHOX-204ENST00000554971 SERP1Q9Y6X1 66 aa10.57□□□□□ -0.72
SHOX-204ENST00000554971 FAM229AH3BQW9 127 aa10.56□□□□□ -0.72
SHOX-204ENST00000554971 A0A0U1RQV1 116 aa10.56□□□□□ -0.72
SHOX-204ENST00000554971 FAT3Q8TDW7 4589 aa10.55□□□□□ -0.72
SHOX-204ENST00000554971 RPL37AP61513 92 aaKnown RBP10.54□□□□□ -0.72
SHOX-204ENST00000554971 KRTAP13-1Q8IUC0 172 aa10.53□□□□□ -0.72
SHOX-204ENST00000554971 PSORS1C2Q9UIG4 136 aa10.53□□□□□ -0.72
SHOX-204ENST00000554971 K7EQZ3 153 aa10.52□□□□□ -0.73
SHOX-204ENST00000554971 A0A087WSZ3 146 aa10.51□□□□□ -0.73
SHOX-204ENST00000554971 HCG22E2RYF7 251 aa10.51□□□□□ -0.73
SHOX-204ENST00000554971 PLA2G1BP04054 148 aaKnown RBP10.5□□□□□ -0.73
SHOX-204ENST00000554971 C5orf47Q569G3 176 aa10.48□□□□□ -0.73
SHOX-204ENST00000554971 OXTP01178 125 aa10.47□□□□□ -0.73
SHOX-204ENST00000554971 A0A0G2JQZ4 141 aa10.45□□□□□ -0.74
SHOX-204ENST00000554971 ZNF706Q9Y5V0 76 aaPredicted RBP10.45□□□□□ -0.74
SHOX-204ENST00000554971 LINC00472Q9H8W2 130 aa10.43□□□□□ -0.74
SHOX-204ENST00000554971 TNXBP22105 4242 aa10.43□□□□□ -0.74
SHOX-204ENST00000554971 LINC00483Q53H64 154 aa10.43□□□□□ -0.74
SHOX-204ENST00000554971 A8MWP4 228 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms