RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 EPM2AB3EWF7 344 aa10.76□□□□□ -0.69
PCNX1-209ENST00000554879 SPAG11AQ6PDA7 123 aa10.76□□□□□ -0.69
PCNX1-209ENST00000554879 TENM2Q9NT68 2774 aa10.76□□□□□ -0.69
PCNX1-209ENST00000554879 Q8NDZ9 215 aa10.76□□□□□ -0.69
PCNX1-209ENST00000554879 PCOTHQ58A44 107 aa10.75□□□□□ -0.69
PCNX1-209ENST00000554879 KRTAP1-5Q9BYS1 174 aa10.75□□□□□ -0.69
PCNX1-209ENST00000554879 PRLHP81277 87 aa10.74□□□□□ -0.69
PCNX1-209ENST00000554879 IGLV6-57P01721 117 aa10.73□□□□□ -0.69
PCNX1-209ENST00000554879 IGLV5-52A0A0A0MRZ9 124 aa10.73□□□□□ -0.69
PCNX1-209ENST00000554879 REG3GQ6UW15 175 aa10.73□□□□□ -0.69
PCNX1-209ENST00000554879 ERC2-IT1O76042 136 aa10.72□□□□□ -0.69
PCNX1-209ENST00000554879 KRTAP26-1Q6PEX3 210 aa10.72□□□□□ -0.69
PCNX1-209ENST00000554879 IGKV4-1P06312 121 aa10.72□□□□□ -0.69
PCNX1-209ENST00000554879 Q1T7F1 81 aa10.71□□□□□ -0.69
PCNX1-209ENST00000554879 WWC2-AS2Q96NR7 200 aa10.71□□□□□ -0.69
PCNX1-209ENST00000554879 DHRS4-AS1Q9P1J3 65 aa10.71□□□□□ -0.7
PCNX1-209ENST00000554879 H0Y9J4 135 aa10.7□□□□□ -0.7
PCNX1-209ENST00000554879 PHF5AQ7RTV0 110 aaKnown RBP10.69□□□□□ -0.7
PCNX1-209ENST00000554879 ATP11AUNQ6ZP68 121 aa10.69□□□□□ -0.7
PCNX1-209ENST00000554879 OCR1Q9BZK8 76 aa10.69□□□□□ -0.7
PCNX1-209ENST00000554879 C1orf137Q5JT78 98 aa10.68□□□□□ -0.7
PCNX1-209ENST00000554879 CASC2Q6XLA1 102 aa10.68□□□□□ -0.7
PCNX1-209ENST00000554879 ST20-AS1Q8NBB2 130 aa10.67□□□□□ -0.7
PCNX1-209ENST00000554879 C16orf90A8MZG2 172 aa10.67□□□□□ -0.7
PCNX1-209ENST00000554879 C7orf65Q6ZTY9 151 aa10.67□□□□□ -0.7
PCNX1-209ENST00000554879 TGP01266 2768 aa10.66□□□□□ -0.7
PCNX1-209ENST00000554879 H0Y9P7 68 aa10.66□□□□□ -0.7
PCNX1-209ENST00000554879 ELOF1P60002 83 aaKnown RBP10.66□□□□□ -0.7
PCNX1-209ENST00000554879 PRAC1Q96KF2 57 aa10.64□□□□□ -0.71
PCNX1-209ENST00000554879 LCA10Q71F78 164 aa10.64□□□□□ -0.71
PCNX1-209ENST00000554879 RTL8CO15255 209 aa10.63□□□□□ -0.71
PCNX1-209ENST00000554879 K7EQZ3 153 aa10.61□□□□□ -0.71
PCNX1-209ENST00000554879 A0A1W2PNN7 141 aa10.6□□□□□ -0.71
PCNX1-209ENST00000554879 A0A087WTM6 91 aa10.59□□□□□ -0.71
PCNX1-209ENST00000554879 Q5VV11 94 aa10.59□□□□□ -0.71
PCNX1-209ENST00000554879 TLX1NBP0CAT3 122 aa10.59□□□□□ -0.71
PCNX1-209ENST00000554879 Q6ZRX8 168 aa10.59□□□□□ -0.71
PCNX1-209ENST00000554879 IGLV1-50A0A075B6I6 118 aa10.59□□□□□ -0.71
PCNX1-209ENST00000554879 C9orf163Q8N9P6 203 aa10.58□□□□□ -0.72
PCNX1-209ENST00000554879 KCNQ1DNQ9H478 68 aa10.58□□□□□ -0.72
PCNX1-209ENST00000554879 LINC00528Q8N1L1 170 aa10.57□□□□□ -0.72
PCNX1-209ENST00000554879 C8orf87E5RJ46 101 aa10.56□□□□□ -0.72
PCNX1-209ENST00000554879 IGLV9-49A0A0B4J1Y8 123 aa10.56□□□□□ -0.72
PCNX1-209ENST00000554879 CNBPP62633 177 aaKnown RBP10.54□□□□□ -0.72
PCNX1-209ENST00000554879 A0A087WSZ3 146 aa10.54□□□□□ -0.72
PCNX1-209ENST00000554879 LOC101927531A0A1B0GV80 90 aa10.53□□□□□ -0.72
PCNX1-209ENST00000554879 RPL37AP61513 92 aaKnown RBP10.53□□□□□ -0.72
PCNX1-209ENST00000554879 COA5Q86WW8 74 aa10.52□□□□□ -0.72
PCNX1-209ENST00000554879 CYP4F30PQ9H0H9 118 aa10.52□□□□□ -0.72
PCNX1-209ENST00000554879 A0A0G2JQZ4 141 aa10.51□□□□□ -0.73
PCNX1-209ENST00000554879 Q9BRP9 147 aa10.5□□□□□ -0.73
PCNX1-209ENST00000554879 LINC00476Q8WZB0 136 aa10.49□□□□□ -0.73
PCNX1-209ENST00000554879 TNP2Q05952 138 aa10.49□□□□□ -0.73
PCNX1-209ENST00000554879 Q8N9P0 234 aaPredicted RBP10.49□□□□□ -0.73
PCNX1-209ENST00000554879 RETNLBQ9BQ08 111 aa10.48□□□□□ -0.73
PCNX1-209ENST00000554879 PLA2G2DQ9UNK4 145 aa10.47□□□□□ -0.73
PCNX1-209ENST00000554879 CDC42SE1Q9NRR8 79 aa10.45□□□□□ -0.74
PCNX1-209ENST00000554879 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.45□□□□□ -0.74
PCNX1-209ENST00000554879 ZNF706Q9Y5V0 76 aaPredicted RBP10.44□□□□□ -0.74
PCNX1-209ENST00000554879 Q8N377 158 aa10.43□□□□□ -0.74
PCNX1-209ENST00000554879 LINC00313P59037 77 aa10.41□□□□□ -0.74
PCNX1-209ENST00000554879 LINC01554Q52M75 96 aa10.4□□□□□ -0.74
PCNX1-209ENST00000554879 Q8NBF4 154 aa10.4□□□□□ -0.74
PCNX1-209ENST00000554879 IGLV5-37A0A075B6J1 123 aa10.39□□□□□ -0.75
PCNX1-209ENST00000554879 MOBPQ13875 183 aa10.38□□□□□ -0.75
PCNX1-209ENST00000554879 PANO1I0J062 215 aa10.36□□□□□ -0.75
PCNX1-209ENST00000554879 A0A1W2PNM2 257 aa10.36□□□□□ -0.75
PCNX1-209ENST00000554879 SPINK6Q6UWN8 80 aa10.35□□□□□ -0.75
PCNX1-209ENST00000554879 CIRBP-AS1Q8TBR5 109 aa10.34□□□□□ -0.75
PCNX1-209ENST00000554879 ANAPC11Q9NYG5 84 aa10.33□□□□□ -0.76
PCNX1-209ENST00000554879 SPINK7P58062 85 aa10.33□□□□□ -0.76
PCNX1-209ENST00000554879 PSORS1C2Q9UIG4 136 aa10.33□□□□□ -0.76
PCNX1-209ENST00000554879 Q75L30 129 aa10.32□□□□□ -0.76
PCNX1-209ENST00000554879 IGLV8-61A0A075B6I0 122 aa10.32□□□□□ -0.76
PCNX1-209ENST00000554879 FBN3Q75N90 2809 aa10.31□□□□□ -0.76
PCNX1-209ENST00000554879 Q6ZRN7 208 aaPredicted RBP10.31□□□□□ -0.76
PCNX1-209ENST00000554879 DSCR10P59022 87 aa10.31□□□□□ -0.76
PCNX1-209ENST00000554879 K7ERS5 55 aa10.31□□□□□ -0.76
PCNX1-209ENST00000554879 Q6ZR54 194 aa10.3□□□□□ -0.76
PCNX1-209ENST00000554879 KRTAP7-1Q8IUC3 87 aa10.3□□□□□ -0.76
PCNX1-209ENST00000554879 SPACA4Q8TDM5 124 aa10.29□□□□□ -0.76
PCNX1-209ENST00000554879 ADM2Q7Z4H4 148 aa10.28□□□□□ -0.76
PCNX1-209ENST00000554879 A6NN06 94 aa10.27□□□□□ -0.76
PCNX1-209ENST00000554879 SPRR1AP35321 89 aa10.27□□□□□ -0.76
PCNX1-209ENST00000554879 MEGF8Q7Z7M0 2845 aa10.26□□□□□ -0.77
PCNX1-209ENST00000554879 KRTAP10-2P60368 255 aa10.25□□□□□ -0.77
PCNX1-209ENST00000554879 COL7A1Q02388 2944 aa10.25□□□□□ -0.77
PCNX1-209ENST00000554879 KRTAP21-3Q3LHN1 58 aa10.25□□□□□ -0.77
PCNX1-209ENST00000554879 A0A1B0GU69 56 aa10.25□□□□□ -0.77
PCNX1-209ENST00000554879 IGFL1Q6UW32 110 aa10.25□□□□□ -0.77
PCNX1-209ENST00000554879 PRR26Q8N8Z3 221 aa10.25□□□□□ -0.77
PCNX1-209ENST00000554879 FLG2Q5D862 2391 aaPredicted RBP10.24□□□□□ -0.77
PCNX1-209ENST00000554879 IGHV6-1A0A0B4J1U7 121 aa10.24□□□□□ -0.77
PCNX1-209ENST00000554879 SMR3BP02814 79 aaPredicted RBP10.23□□□□□ -0.77
PCNX1-209ENST00000554879 ZNF861PO60384 105 aa10.22□□□□□ -0.77
PCNX1-209ENST00000554879 KRTAP11-1Q8IUC1 163 aa10.22□□□□□ -0.77
PCNX1-209ENST00000554879 HUWE1Q7Z6Z7 4374 aaKnown RBP10.2□□□□□ -0.78
PCNX1-209ENST00000554879 KRTAP4-16G5E9R7 235 aaPredicted RBP10.19□□□□□ -0.78
PCNX1-209ENST00000554879 SPANXA2-OT1Q8N9U9 137 aa10.19□□□□□ -0.78
PCNX1-209ENST00000554879 H3BPC8 53 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms