RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 MYH8P13535 1937 aa-0.51□□□□□ -2.49
SCFD1-214ENST00000554819 RGPD4Q7Z3J3 1758 aa-0.51□□□□□ -2.49
SCFD1-214ENST00000554819 MROH1Q8NDA8 1641 aa-0.51□□□□□ -2.49
SCFD1-214ENST00000554819 DYNLRB1Q9NP97 96 aa-0.51□□□□□ -2.49
SCFD1-214ENST00000554819 FAM208AQ9UK61 1670 aaKnown RBP-0.51□□□□□ -2.49
SCFD1-214ENST00000554819 LINC01558Q9Y6Z2 57 aa-0.51□□□□□ -2.49
SCFD1-214ENST00000554819 URB2Q14146 1524 aaKnown RBP-0.52□□□□□ -2.49
SCFD1-214ENST00000554819 LMTK2Q8IWU2 1503 aa-0.52□□□□□ -2.49
SCFD1-214ENST00000554819 A2ML1A8K2U0 1454 aa-0.52□□□□□ -2.49
SCFD1-214ENST00000554819 GAPVD1Q14C86 1478 aa-0.52□□□□□ -2.49
SCFD1-214ENST00000554819 NSD3Q9BZ95 1437 aa-0.52□□□□□ -2.49
SCFD1-214ENST00000554819 TRBV7-3A0A075B6L6 115 aa-0.52□□□□□ -2.49
SCFD1-214ENST00000554819 DEFB136Q30KP8 78 aa-0.52□□□□□ -2.49
SCFD1-214ENST00000554819 SPEF2Q9C093 1822 aa-0.52□□□□□ -2.49
SCFD1-214ENST00000554819 NLRP1Q9C000 1473 aa-0.53□□□□□ -2.49
SCFD1-214ENST00000554819 MYH6P13533 1939 aa-0.53□□□□□ -2.49
SCFD1-214ENST00000554819 H3BNG1 76 aa-0.53□□□□□ -2.49
SCFD1-214ENST00000554819 HMGN4O00479 90 aa-0.53□□□□□ -2.49
SCFD1-214ENST00000554819 SSSCA1O60232 199 aa-0.53□□□□□ -2.49
SCFD1-214ENST00000554819 SELENOWP63302 87 aa-0.53□□□□□ -2.49
SCFD1-214ENST00000554819 BTG2P78543 158 aa-0.53□□□□□ -2.49
SCFD1-214ENST00000554819 DEFB110Q30KQ9 67 aa-0.53□□□□□ -2.49
SCFD1-214ENST00000554819 ARL11Q969Q4 196 aa-0.53□□□□□ -2.49
SCFD1-214ENST00000554819 NAA60Q9H7X0 242 aa-0.53□□□□□ -2.49
SCFD1-214ENST00000554819 FANCAO15360 1455 aa-0.54□□□□□ -2.5
SCFD1-214ENST00000554819 CPSF1Q10570 1443 aaKnown RBP-0.54□□□□□ -2.5
SCFD1-214ENST00000554819 PDCD11Q14690 1871 aaKnown RBP-0.54□□□□□ -2.5
SCFD1-214ENST00000554819 ROCK2O75116 1388 aaKnown RBP-0.54□□□□□ -2.5
SCFD1-214ENST00000554819 LOC285095A0A1B0GVY8 99 aa-0.54□□□□□ -2.5
SCFD1-214ENST00000554819 UBE2D3P61077 147 aa-0.54□□□□□ -2.5
SCFD1-214ENST00000554819 MEIG1Q5JSS6 88 aa-0.54□□□□□ -2.5
SCFD1-214ENST00000554819 CLPSL2Q6UWE3 100 aa-0.54□□□□□ -2.5
SCFD1-214ENST00000554819 TSLPQ969D9 159 aa-0.54□□□□□ -2.5
SCFD1-214ENST00000554819 PPP3R2Q96LZ3 170 aa-0.54□□□□□ -2.5
SCFD1-214ENST00000554819 SPANXDQ9BXN6 97 aa-0.54□□□□□ -2.5
SCFD1-214ENST00000554819 LINC00470Q9BZP3 86 aa-0.54□□□□□ -2.5
SCFD1-214ENST00000554819 ABCC1P33527 1531 aa-0.54□□□□□ -2.5
SCFD1-214ENST00000554819 CCDC88BA6NC98 1476 aa-0.54□□□□□ -2.5
SCFD1-214ENST00000554819 KIF20BQ96Q89 1820 aa-0.54□□□□□ -2.5
SCFD1-214ENST00000554819 ABCA9Q8IUA7 1624 aa-0.55□□□□□ -2.5
SCFD1-214ENST00000554819 A8MTW9 85 aa-0.55□□□□□ -2.5
SCFD1-214ENST00000554819 F8WEM9 126 aa-0.55□□□□□ -2.5
SCFD1-214ENST00000554819 H3BSH0 61 aa-0.55□□□□□ -2.5
SCFD1-214ENST00000554819 CCL22O00626 93 aa-0.55□□□□□ -2.5
SCFD1-214ENST00000554819 SFT2D2O95562 160 aa-0.55□□□□□ -2.5
SCFD1-214ENST00000554819 Q56UQ5 140 aa-0.55□□□□□ -2.5
SCFD1-214ENST00000554819 SMIM5Q71RC9 77 aa-0.55□□□□□ -2.5
SCFD1-214ENST00000554819 SPRR4Q96PI1 79 aa-0.55□□□□□ -2.5
SCFD1-214ENST00000554819 SAMD9LQ8IVG5 1584 aa-0.55□□□□□ -2.5
SCFD1-214ENST00000554819 CFAP74Q9C0B2 1584 aa-0.55□□□□□ -2.5
SCFD1-214ENST00000554819 ARHGAP5Q13017 1502 aa-0.55□□□□□ -2.5
SCFD1-214ENST00000554819 MYH7P12883 1935 aa-0.56□□□□□ -2.5
SCFD1-214ENST00000554819 MIF4GDA9UHW6 222 aaKnown RBP-0.56□□□□□ -2.5
SCFD1-214ENST00000554819 SPINK4O60575 86 aa-0.56□□□□□ -2.5
SCFD1-214ENST00000554819 MGPP08493 103 aa-0.56□□□□□ -2.5
SCFD1-214ENST00000554819 TFF3Q07654 80 aa-0.56□□□□□ -2.5
SCFD1-214ENST00000554819 DEFB135Q30KP9 77 aa-0.56□□□□□ -2.5
SCFD1-214ENST00000554819 COMMD6Q7Z4G1 85 aa-0.56□□□□□ -2.5
SCFD1-214ENST00000554819 C5orf38Q86SI9 138 aa-0.56□□□□□ -2.5
SCFD1-214ENST00000554819 C8orf59Q8N0T1 100 aaPredicted RBP-0.56□□□□□ -2.5
SCFD1-214ENST00000554819 TMEM263Q8WUH6 116 aaKnown RBP-0.56□□□□□ -2.5
SCFD1-214ENST00000554819 CRIPTQ9P021 101 aa-0.56□□□□□ -2.5
SCFD1-214ENST00000554819 AKAP12Q02952 1782 aa-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 SYCP2Q9BX26 1530 aa-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 DEFB131BA0A096LNP1 70 aa-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 TRBV7-4A0A0J9YYF1 115 aa-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 LINC01546A6NGU7 62 aa-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 FAM25AB3EWG3 89 aa-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 FAM25CB3EWG5 89 aa-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 FAM25GB3EWG6 89 aa-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 NDUFA2O43678 99 aa-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 GNG7O60262 68 aa-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 APOC2P02655 101 aa-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 FGF7P21781 194 aa-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 MRPL54Q6P161 138 aaKnown RBP-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 RPS27LQ71UM5 84 aaKnown RBP-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 HFM1A2PYH4 1435 aa-0.57□□□□□ -2.5
SCFD1-214ENST00000554819 A0A087WVE0 104 aa-0.58□□□□□ -2.5
SCFD1-214ENST00000554819 HTN3P15516 51 aa-0.58□□□□□ -2.5
SCFD1-214ENST00000554819 CD52P31358 61 aa-0.58□□□□□ -2.5
SCFD1-214ENST00000554819 UBE2D2P62837 147 aa-0.58□□□□□ -2.5
SCFD1-214ENST00000554819 PRLHP81277 87 aa-0.58□□□□□ -2.5
SCFD1-214ENST00000554819 CATR1Q13166 79 aa-0.58□□□□□ -2.5
SCFD1-214ENST00000554819 C10orf113Q5VZT2 155 aa-0.58□□□□□ -2.5
SCFD1-214ENST00000554819 MYOZ3Q8TDC0 251 aa-0.58□□□□□ -2.5
SCFD1-214ENST00000554819 NXT2Q9NPJ8 142 aaKnown RBP-0.58□□□□□ -2.5
SCFD1-214ENST00000554819 CDC42SE2Q9NRR3 84 aa-0.58□□□□□ -2.5
SCFD1-214ENST00000554819 LINC00474Q9P2X8 69 aa-0.58□□□□□ -2.5
SCFD1-214ENST00000554819 NAIPQ13075 1403 aa-0.58□□□□□ -2.5
SCFD1-214ENST00000554819 LOC100130705A0A1B0GUX0 176 aa-0.59□□□□□ -2.5
SCFD1-214ENST00000554819 CHKB-CPT1BH3BT56 60 aa-0.59□□□□□ -2.5
SCFD1-214ENST00000554819 M0QZ58 72 aa-0.59□□□□□ -2.5
SCFD1-214ENST00000554819 IGLC1P0CG04 106 aa-0.59□□□□□ -2.5
SCFD1-214ENST00000554819 WHAMMP3Q1A5X7 153 aa-0.59□□□□□ -2.5
SCFD1-214ENST00000554819 CCDC58Q4VC31 144 aa-0.59□□□□□ -2.5
SCFD1-214ENST00000554819 LINC01556Q5JQF7 62 aa-0.59□□□□□ -2.5
SCFD1-214ENST00000554819 DEFB105AQ8NG35 78 aa-0.59□□□□□ -2.5
SCFD1-214ENST00000554819 ABCA10Q8WWZ4 1543 aa-0.59□□□□□ -2.5
SCFD1-214ENST00000554819 ABCC8Q09428 1581 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms