RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 TIMM17BO60830 172 aa2.35□□□□□ -2.03
VTI1B-203ENST00000554636 C3orf79P0CE67 100 aa2.35□□□□□ -2.03
VTI1B-203ENST00000554636 NPC2P61916 151 aa2.35□□□□□ -2.03
VTI1B-203ENST00000554636 TPRXLQ17RH7 258 aa2.35□□□□□ -2.03
VTI1B-203ENST00000554636 Q6ZRX8 168 aa2.35□□□□□ -2.03
VTI1B-203ENST00000554636 Q6ZVQ6 151 aa2.35□□□□□ -2.03
VTI1B-203ENST00000554636 MIEN1Q9BRT3 115 aa2.35□□□□□ -2.03
VTI1B-203ENST00000554636 TTTY13Q9BZ97 58 aa2.35□□□□□ -2.03
VTI1B-203ENST00000554636 PPDPFQ9H3Y8 114 aa2.35□□□□□ -2.03
VTI1B-203ENST00000554636 LOC105371267A0A1B0GV96 52 aa2.34□□□□□ -2.03
VTI1B-203ENST00000554636 ZNF815PA8K554 130 aa2.34□□□□□ -2.03
VTI1B-203ENST00000554636 ZNF73O43830 326 aaPredicted RBP2.34□□□□□ -2.03
VTI1B-203ENST00000554636 S100A1P23297 94 aa2.34□□□□□ -2.03
VTI1B-203ENST00000554636 Q1RN00 199 aa2.34□□□□□ -2.03
VTI1B-203ENST00000554636 SPAG11AQ6PDA7 123 aa2.34□□□□□ -2.03
VTI1B-203ENST00000554636 LINC00308Q8TCZ7 52 aa2.34□□□□□ -2.03
VTI1B-203ENST00000554636 SPANXCQ9NY87 97 aa2.34□□□□□ -2.03
VTI1B-203ENST00000554636 KRTDAPP60985 99 aa2.33□□□□□ -2.04
VTI1B-203ENST00000554636 S100A12P80511 92 aa2.33□□□□□ -2.04
VTI1B-203ENST00000554636 MOBPQ13875 183 aa2.33□□□□□ -2.04
VTI1B-203ENST00000554636 S100A7L2Q5SY68 101 aa2.33□□□□□ -2.04
VTI1B-203ENST00000554636 Q6ZVH6 145 aa2.33□□□□□ -2.04
VTI1B-203ENST00000554636 FP248Q71RG6 208 aaPredicted RBP2.33□□□□□ -2.04
VTI1B-203ENST00000554636 ST20-AS1Q8NBB2 130 aa2.33□□□□□ -2.04
VTI1B-203ENST00000554636 SPANXDQ9BXN6 97 aa2.33□□□□□ -2.04
VTI1B-203ENST00000554636 SPINK1P00995 79 aa2.32□□□□□ -2.04
VTI1B-203ENST00000554636 RPS29P62273 56 aaKnown RBP2.32□□□□□ -2.04
VTI1B-203ENST00000554636 JOSD1Q15040 202 aaPredicted RBP2.32□□□□□ -2.04
VTI1B-203ENST00000554636 ATOH7Q8N100 152 aa2.32□□□□□ -2.04
VTI1B-203ENST00000554636 DHRS4-AS1Q9P1J3 65 aa2.32□□□□□ -2.04
VTI1B-203ENST00000554636 C20orf202A1L168 122 aa2.31□□□□□ -2.04
VTI1B-203ENST00000554636 C5orf52A6NGY3 159 aa2.31□□□□□ -2.04
VTI1B-203ENST00000554636 SPRR1BP22528 89 aa2.31□□□□□ -2.04
VTI1B-203ENST00000554636 ELOF1P60002 83 aaKnown RBP2.31□□□□□ -2.04
VTI1B-203ENST00000554636 C6orf99Q4VX62 202 aa2.31□□□□□ -2.04
VTI1B-203ENST00000554636 SSBP3-AS1Q7Z2R9 100 aa2.31□□□□□ -2.04
VTI1B-203ENST00000554636 PCP2Q8IVA1 136 aa2.31□□□□□ -2.04
VTI1B-203ENST00000554636 HIST3H2BBQ8N257 126 aa2.31□□□□□ -2.04
VTI1B-203ENST00000554636 CBY1Q9Y3M2 126 aa2.31□□□□□ -2.04
VTI1B-203ENST00000554636 IFITM1P13164 125 aa2.3□□□□□ -2.04
VTI1B-203ENST00000554636 COX7BP24311 80 aa2.3□□□□□ -2.04
VTI1B-203ENST00000554636 C9orf153Q5TBE3 101 aa2.3□□□□□ -2.04
VTI1B-203ENST00000554636 SCGB1D4Q6XE38 83 aa2.3□□□□□ -2.04
VTI1B-203ENST00000554636 LINC00518Q8N0U6 118 aa2.3□□□□□ -2.04
VTI1B-203ENST00000554636 OR13C6PQ8NH95 151 aa2.3□□□□□ -2.04
VTI1B-203ENST00000554636 HIST1H2BLQ99880 126 aa2.3□□□□□ -2.04
VTI1B-203ENST00000554636 TRBV7-6A0A0J9YX20 115 aa2.29□□□□□ -2.04
VTI1B-203ENST00000554636 A4D1N5 150 aa2.29□□□□□ -2.04
VTI1B-203ENST00000554636 HINT1P49773 126 aaPredicted RBP2.29□□□□□ -2.04
VTI1B-203ENST00000554636 AKR1D1P51857 326 aa2.29□□□□□ -2.04
VTI1B-203ENST00000554636 MUSTN1Q8IVN3 82 aa2.29□□□□□ -2.04
VTI1B-203ENST00000554636 COPS9Q8WXC6 57 aa2.29□□□□□ -2.04
VTI1B-203ENST00000554636 IGLV5-48A0A075B6I7 105 aa2.28□□□□□ -2.04
VTI1B-203ENST00000554636 A0A0U1RQV1 116 aa2.28□□□□□ -2.04
VTI1B-203ENST00000554636 A0A1B0GWB2 263 aa2.28□□□□□ -2.04
VTI1B-203ENST00000554636 SLC25A20O43772 301 aa2.28□□□□□ -2.04
VTI1B-203ENST00000554636 ASB16-AS1Q495Z4 193 aa2.28□□□□□ -2.04
VTI1B-203ENST00000554636 KRTAP4-1Q9BYQ7 146 aa2.28□□□□□ -2.04
VTI1B-203ENST00000554636 FLGP20930 4061 aaPredicted RBP2.27□□□□□ -2.05
VTI1B-203ENST00000554636 TRAV13-2A0A0B4J235 113 aa2.27□□□□□ -2.05
VTI1B-203ENST00000554636 TEX49A0A1B0GTD5 131 aa2.27□□□□□ -2.05
VTI1B-203ENST00000554636 A6NDN8 102 aa2.27□□□□□ -2.05
VTI1B-203ENST00000554636 PCP4L1A6NKN8 68 aa2.27□□□□□ -2.05
VTI1B-203ENST00000554636 S100A2P29034 98 aa2.27□□□□□ -2.05
VTI1B-203ENST00000554636 SLC25A34Q6PIV7 304 aa2.27□□□□□ -2.05
VTI1B-203ENST00000554636 SMIM11BQ8TCY0 68 aa2.27□□□□□ -2.05
VTI1B-203ENST00000554636 LAMTOR3Q9UHA4 124 aa2.27□□□□□ -2.05
VTI1B-203ENST00000554636 HSBP1L1C9JCN9 74 aa2.26□□□□□ -2.05
VTI1B-203ENST00000554636 CD164Q04900 197 aa2.26□□□□□ -2.05
VTI1B-203ENST00000554636 TAL2Q16559 108 aa2.26□□□□□ -2.05
VTI1B-203ENST00000554636 HRCT1Q6UXD1 115 aa2.26□□□□□ -2.05
VTI1B-203ENST00000554636 DEFB105AQ8NG35 78 aa2.26□□□□□ -2.05
VTI1B-203ENST00000554636 LIMD2Q9BT23 127 aa2.26□□□□□ -2.05
VTI1B-203ENST00000554636 PRO1933Q9H354 126 aa2.26□□□□□ -2.05
VTI1B-203ENST00000554636 A0A0G2JQZ4 141 aa2.25□□□□□ -2.05
VTI1B-203ENST00000554636 H7C2G1 150 aa2.25□□□□□ -2.05
VTI1B-203ENST00000554636 COX8AP10176 69 aa2.25□□□□□ -2.05
VTI1B-203ENST00000554636 Q5XG85 94 aa2.25□□□□□ -2.05
VTI1B-203ENST00000554636 LINC00575Q6W349 94 aa2.25□□□□□ -2.05
VTI1B-203ENST00000554636 NHP2Q9NX24 153 aaKnown RBP2.25□□□□□ -2.05
VTI1B-203ENST00000554636 DLEU1O43261 78 aa2.24□□□□□ -2.05
VTI1B-203ENST00000554636 C12orf57Q99622 126 aa2.24□□□□□ -2.05
VTI1B-203ENST00000554636 IGLV8-61A0A075B6I0 122 aa2.23□□□□□ -2.05
VTI1B-203ENST00000554636 hADV29S1A0JD25 119 aa2.23□□□□□ -2.05
VTI1B-203ENST00000554636 C9orf92A6NGG3 77 aa2.23□□□□□ -2.05
VTI1B-203ENST00000554636 C1orf195Q5TG92 126 aa2.23□□□□□ -2.05
VTI1B-203ENST00000554636 Q6ZQY7 126 aa2.23□□□□□ -2.05
VTI1B-203ENST00000554636 C2orf91Q6ZV80 131 aa2.23□□□□□ -2.05
VTI1B-203ENST00000554636 A0A0B4J2C4 111 aa2.22□□□□□ -2.05
VTI1B-203ENST00000554636 F8WEM9 126 aa2.22□□□□□ -2.05
VTI1B-203ENST00000554636 VAMP3Q15836 100 aa2.22□□□□□ -2.05
VTI1B-203ENST00000554636 KRTAP19-2Q3LHN2 52 aa2.22□□□□□ -2.05
VTI1B-203ENST00000554636 SPATA45Q537H7 98 aa2.22□□□□□ -2.05
VTI1B-203ENST00000554636 PCOTHQ58A44 107 aa2.22□□□□□ -2.05
VTI1B-203ENST00000554636 IGFL1Q6UW32 110 aa2.22□□□□□ -2.05
VTI1B-203ENST00000554636 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.22□□□□□ -2.05
VTI1B-203ENST00000554636 HIST1H4GQ99525 98 aa2.22□□□□□ -2.05
VTI1B-203ENST00000554636 HIGD1BQ9P298 99 aa2.22□□□□□ -2.05
VTI1B-203ENST00000554636 TRBV7-7A0A0K0K1E9 115 aa2.21□□□□□ -2.06
VTI1B-203ENST00000554636 BVES-AS1Q5T3Y7 98 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms