RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 CLEC2BQ92478 149 aa9.09□□□□□ -0.95
SYNE2-211ENST00000553801 TRBV20-1A0A075B6N2 111 aa9.08□□□□□ -0.96
SYNE2-211ENST00000553801 SMIM11BQ8TCY0 68 aa9.08□□□□□ -0.96
SYNE2-211ENST00000553801 VAMP3Q15836 100 aa9.07□□□□□ -0.96
SYNE2-211ENST00000553801 MUSTN1Q8IVN3 82 aa9.07□□□□□ -0.96
SYNE2-211ENST00000553801 IGFL1Q6UW32 110 aa9.06□□□□□ -0.96
SYNE2-211ENST00000553801 Q96NJ1 140 aa9.06□□□□□ -0.96
SYNE2-211ENST00000553801 COLCA2A8K830 154 aa9.05□□□□□ -0.96
SYNE2-211ENST00000553801 S100A6P06703 90 aa9.05□□□□□ -0.96
SYNE2-211ENST00000553801 OCIAD2Q56VL3 154 aa9.04□□□□□ -0.96
SYNE2-211ENST00000553801 C12orf57Q99622 126 aa9.04□□□□□ -0.96
SYNE2-211ENST00000553801 LST1O00453 97 aa9.03□□□□□ -0.96
SYNE2-211ENST00000553801 LINC00575Q6W349 94 aa9.03□□□□□ -0.96
SYNE2-211ENST00000553801 Q6ZQY7 126 aa9.02□□□□□ -0.97
SYNE2-211ENST00000553801 FCGBPQ9Y6R7 5405 aaPredicted RBP9.02□□□□□ -0.97
SYNE2-211ENST00000553801 hADV29S1A0JD25 119 aa9.01□□□□□ -0.97
SYNE2-211ENST00000553801 C3orf79P0CE67 100 aa9□□□□□ -0.97
SYNE2-211ENST00000553801 C20orf166-AS1Q96NR2 134 aa9□□□□□ -0.97
SYNE2-211ENST00000553801 HIST1H2BKO60814 126 aa8.99□□□□□ -0.97
SYNE2-211ENST00000553801 HIST1H2BJP06899 126 aa8.99□□□□□ -0.97
SYNE2-211ENST00000553801 HIST1H2BOP23527 126 aa8.99□□□□□ -0.97
SYNE2-211ENST00000553801 HIST1H2BBP33778 126 aa8.99□□□□□ -0.97
SYNE2-211ENST00000553801 HIST1H2BDP58876 126 aa8.99□□□□□ -0.97
SYNE2-211ENST00000553801 HIST1H2BCP62807 126 aa8.99□□□□□ -0.97
SYNE2-211ENST00000553801 HIST2H2BEQ16778 126 aa8.99□□□□□ -0.97
SYNE2-211ENST00000553801 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.99□□□□□ -0.97
SYNE2-211ENST00000553801 HIST1H2BHQ93079 126 aa8.99□□□□□ -0.97
SYNE2-211ENST00000553801 HIST1H2BNQ99877 126 aa8.99□□□□□ -0.97
SYNE2-211ENST00000553801 HIST1H2BMQ99879 126 aa8.99□□□□□ -0.97
SYNE2-211ENST00000553801 A8MUU9 505 aa8.98□□□□□ -0.97
SYNE2-211ENST00000553801 KRTDAPP60985 99 aa8.97□□□□□ -0.97
SYNE2-211ENST00000553801 ANKRD39Q53RE8 183 aa8.97□□□□□ -0.97
SYNE2-211ENST00000553801 KRTAP19-1Q8IUB9 90 aa8.97□□□□□ -0.97
SYNE2-211ENST00000553801 MT2AP02795 61 aa8.96□□□□□ -0.98
SYNE2-211ENST00000553801 SS18L2Q9UHA2 77 aa8.96□□□□□ -0.98
SYNE2-211ENST00000553801 SCGB1D1O95968 90 aa8.95□□□□□ -0.98
SYNE2-211ENST00000553801 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.95□□□□□ -0.98
SYNE2-211ENST00000553801 PPDPFLQ8WWR9 84 aa8.95□□□□□ -0.98
SYNE2-211ENST00000553801 SNHG12Q9BXW3 62 aa8.95□□□□□ -0.98
SYNE2-211ENST00000553801 PCP4L1A6NKN8 68 aa8.94□□□□□ -0.98
SYNE2-211ENST00000553801 FAM236DA0A1B0GTK5 79 aa8.93□□□□□ -0.98
SYNE2-211ENST00000553801 FAM236CP0DP71 79 aa8.93□□□□□ -0.98
SYNE2-211ENST00000553801 LCE2BO14633 110 aa8.91□□□□□ -0.98
SYNE2-211ENST00000553801 H3BUT2 72 aa8.9□□□□□ -0.98
SYNE2-211ENST00000553801 ATOH7Q8N100 152 aa8.89□□□□□ -0.99
SYNE2-211ENST00000553801 MT1FP04733 61 aa8.88□□□□□ -0.99
SYNE2-211ENST00000553801 KRTAP10-10P60014 251 aa8.88□□□□□ -0.99
SYNE2-211ENST00000553801 KRTAP9-3Q9BYQ3 159 aa8.87□□□□□ -0.99
SYNE2-211ENST00000553801 BVES-AS1Q5T3Y7 98 aa8.86□□□□□ -0.99
SYNE2-211ENST00000553801 TEN1Q86WV5 123 aa8.86□□□□□ -0.99
SYNE2-211ENST00000553801 LINC00846Q9NV44 126 aa8.86□□□□□ -0.99
SYNE2-211ENST00000553801 SNRPEP62304 92 aaKnown RBP8.85□□□□□ -0.99
SYNE2-211ENST00000553801 RBM12B-AS1Q9P1G2 102 aa8.85□□□□□ -0.99
SYNE2-211ENST00000553801 COA6Q5JTJ3 125 aaKnown RBP8.84□□□□□ -0.99
SYNE2-211ENST00000553801 S100A2P29034 98 aa8.83□□□□□ -1
SYNE2-211ENST00000553801 DSCR10P59022 87 aa8.83□□□□□ -1
SYNE2-211ENST00000553801 A0A087WSZ3 146 aa8.81□□□□□ -1
SYNE2-211ENST00000553801 KRTAP16-1A8MUX0 517 aa8.79□□□□□ -1
SYNE2-211ENST00000553801 TSTD3H0UI37 97 aa8.79□□□□□ -1
SYNE2-211ENST00000553801 SNCGO76070 127 aa8.79□□□□□ -1
SYNE2-211ENST00000553801 LINC00313P59037 77 aa8.78□□□□□ -1
SYNE2-211ENST00000553801 MPLKIPQ8TAP9 179 aa8.78□□□□□ -1
SYNE2-211ENST00000553801 MACF1Q9UPN3 7388 aaKnown RBP8.78□□□□□ -1
SYNE2-211ENST00000553801 SIGMAR1Q99720 223 aa8.77□□□□□ -1.01
SYNE2-211ENST00000553801 HRES1P13985 223 aa8.76□□□□□ -1.01
SYNE2-211ENST00000553801 NDUFV3P56181 108 aaKnown RBP8.76□□□□□ -1.01
SYNE2-211ENST00000553801 SYNE2Q8WXH0 6885 aaKnown RBP8.76□□□□□ -1.01
SYNE2-211ENST00000553801 HSBP1L1C9JCN9 74 aa8.73□□□□□ -1.01
SYNE2-211ENST00000553801 H3BMG7 143 aa8.71□□□□□ -1.02
SYNE2-211ENST00000553801 KRTAP19-6Q3LI70 58 aa8.71□□□□□ -1.02
SYNE2-211ENST00000553801 MTURNQ8N3F0 131 aa8.71□□□□□ -1.02
SYNE2-211ENST00000553801 H0YGX0 51 aa8.7□□□□□ -1.02
SYNE2-211ENST00000553801 GHRHP01286 108 aa8.7□□□□□ -1.02
SYNE2-211ENST00000553801 NOTCH2NLQ7Z3S9 236 aa8.7□□□□□ -1.02
SYNE2-211ENST00000553801 HIST1H4GQ99525 98 aa8.7□□□□□ -1.02
SYNE2-211ENST00000553801 IGKV4-1P06312 121 aa8.69□□□□□ -1.02
SYNE2-211ENST00000553801 PYY3Q5JQD4 70 aa8.67□□□□□ -1.02
SYNE2-211ENST00000553801 HIST3H2BBQ8N257 126 aa8.66□□□□□ -1.02
SYNE2-211ENST00000553801 A0A1W2PNM2 257 aa8.65□□□□□ -1.02
SYNE2-211ENST00000553801 FABP2P12104 132 aa8.65□□□□□ -1.02
SYNE2-211ENST00000553801 C14orf144Q96I85 54 aa8.65□□□□□ -1.02
SYNE2-211ENST00000553801 RAB37Q96AX2 223 aa8.63□□□□□ -1.03
SYNE2-211ENST00000553801 FAM218AQ96MZ4 157 aa8.63□□□□□ -1.03
SYNE2-211ENST00000553801 A0A1B0GX51 115 aa8.61□□□□□ -1.03
SYNE2-211ENST00000553801 TRBV7-4A0A0J9YYF1 115 aa8.6□□□□□ -1.03
SYNE2-211ENST00000553801 IGHV6-1A0A0B4J1U7 121 aa8.59□□□□□ -1.03
SYNE2-211ENST00000553801 KRTAP6-3Q3LI67 103 aa8.59□□□□□ -1.03
SYNE2-211ENST00000553801 ANKRD29Q8N6D5 301 aa8.59□□□□□ -1.03
SYNE2-211ENST00000553801 A8MWP4 228 aa8.58□□□□□ -1.04
SYNE2-211ENST00000553801 DEFB116Q30KQ4 102 aa8.57□□□□□ -1.04
SYNE2-211ENST00000553801 HIST1H2BLQ99880 126 aa8.57□□□□□ -1.04
SYNE2-211ENST00000553801 A0A0B4J2C4 111 aa8.56□□□□□ -1.04
SYNE2-211ENST00000553801 M0R143 59 aa8.56□□□□□ -1.04
SYNE2-211ENST00000553801 LINC00472Q9H8W2 130 aa8.56□□□□□ -1.04
SYNE2-211ENST00000553801 COX8AP10176 69 aa8.55□□□□□ -1.04
SYNE2-211ENST00000553801 A0A1B0GV90 55 aa8.53□□□□□ -1.04
SYNE2-211ENST00000553801 C8orf87E5RJ46 101 aa8.53□□□□□ -1.04
SYNE2-211ENST00000553801 DLEU1O43261 78 aa8.52□□□□□ -1.05
SYNE2-211ENST00000553801 SPINK7P58062 85 aa8.52□□□□□ -1.05
SYNE2-211ENST00000553801 ZCCHC13Q8WW36 166 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms