RNA–Protein interactions for RNA: ENST00000553691.5

VIPAS39-205, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-205ENST00000553691 FAM19A5Q7Z5A7 132 aaPredicted RBP4.13□□□□□ -1.75
VIPAS39-205ENST00000553691 Q8IZM0 81 aa4.13□□□□□ -1.75
VIPAS39-205ENST00000553691 LINC00269Q8N2A0 174 aa4.13□□□□□ -1.75
VIPAS39-205ENST00000553691 LINC00337Q8N6G1 96 aa4.13□□□□□ -1.75
VIPAS39-205ENST00000553691 PRR26Q8N8Z3 221 aa4.13□□□□□ -1.75
VIPAS39-205ENST00000553691 RMI2Q96E14 147 aa4.13□□□□□ -1.75
VIPAS39-205ENST00000553691 C22orf24Q9Y442 160 aa4.13□□□□□ -1.75
VIPAS39-205ENST00000553691 PKHD1L1Q86WI1 4243 aa4.13□□□□□ -1.75
VIPAS39-205ENST00000553691 LRP1Q07954 4544 aaKnown RBP4.13□□□□□ -1.75
VIPAS39-205ENST00000553691 IGKV2-28A0A075B6P5 120 aa4.12□□□□□ -1.75
VIPAS39-205ENST00000553691 A0A0U1RRA0 63 aa4.12□□□□□ -1.75
VIPAS39-205ENST00000553691 LOC107984640A0A0U1RRK4 108 aa4.12□□□□□ -1.75
VIPAS39-205ENST00000553691 PANO1I0J062 215 aa4.12□□□□□ -1.75
VIPAS39-205ENST00000553691 IGKV2D-28P01615 120 aa4.12□□□□□ -1.75
VIPAS39-205ENST00000553691 ATP5EP56381 51 aaPredicted RBP4.12□□□□□ -1.75
VIPAS39-205ENST00000553691 REG3AQ06141 175 aa4.12□□□□□ -1.75
VIPAS39-205ENST00000553691 SS18Q15532 418 aa4.12□□□□□ -1.75
VIPAS39-205ENST00000553691 C6orf226Q5I0X4 101 aa4.12□□□□□ -1.75
VIPAS39-205ENST00000553691 DPH3Q96FX2 82 aa4.12□□□□□ -1.75
VIPAS39-205ENST00000553691 FAM218AQ96MZ4 157 aa4.12□□□□□ -1.75
VIPAS39-205ENST00000553691 IGLV10-54A0A075B6I4 117 aa4.11□□□□□ -1.75
VIPAS39-205ENST00000553691 A0A087WYN8 130 aa4.11□□□□□ -1.75
VIPAS39-205ENST00000553691 IGHV3OR16-9A0A0B4J2B5 98 aa4.11□□□□□ -1.75
VIPAS39-205ENST00000553691 LINC00959A0A1B0GUT2 108 aa4.11□□□□□ -1.75
VIPAS39-205ENST00000553691 NDUFC1O43677 76 aa4.11□□□□□ -1.75
VIPAS39-205ENST00000553691 CIRBP-AS1Q8TBR5 109 aa4.11□□□□□ -1.75
VIPAS39-205ENST00000553691 C14orf132Q9NPU4 83 aa4.11□□□□□ -1.75
VIPAS39-205ENST00000553691 LINC00846Q9NV44 126 aa4.11□□□□□ -1.75
VIPAS39-205ENST00000553691 TOMM7Q9P0U1 55 aa4.11□□□□□ -1.75
VIPAS39-205ENST00000553691 TRAV7A0A075B6U4 112 aa4.1□□□□□ -1.75
VIPAS39-205ENST00000553691 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
VIPAS39-205ENST00000553691 C15orf56Q8N910 161 aa4.1□□□□□ -1.75
VIPAS39-205ENST00000553691 C9orf163Q8N9P6 203 aa4.1□□□□□ -1.75
VIPAS39-205ENST00000553691 LOC110117498A0A087WWA1 95 aa4.09□□□□□ -1.75
VIPAS39-205ENST00000553691 IGKV3D-7A0A0C4DH55 119 aa4.09□□□□□ -1.75
VIPAS39-205ENST00000553691 XCL1P47992 114 aa4.09□□□□□ -1.75
VIPAS39-205ENST00000553691 CNBPP62633 177 aaKnown RBP4.09□□□□□ -1.75
VIPAS39-205ENST00000553691 C14orf177Q52M58 125 aa4.09□□□□□ -1.75
VIPAS39-205ENST00000553691 SERP1Q9Y6X1 66 aa4.09□□□□□ -1.75
VIPAS39-205ENST00000553691 CXCL6P80162 114 aa4.08□□□□□ -1.76
VIPAS39-205ENST00000553691 RBM3P98179 157 aaKnown RBP4.08□□□□□ -1.76
VIPAS39-205ENST00000553691 FAT3Q8TDW7 4589 aa4.08□□□□□ -1.76
VIPAS39-205ENST00000553691 NCR3O14931 201 aa4.07□□□□□ -1.76
VIPAS39-205ENST00000553691 PFN2P35080 140 aa4.07□□□□□ -1.76
VIPAS39-205ENST00000553691 CHCHD10Q8WYQ3 142 aaPredicted RBP4.07□□□□□ -1.76
VIPAS39-205ENST00000553691 DSCR8Q96T75 97 aa4.07□□□□□ -1.76
VIPAS39-205ENST00000553691 GVQW2A0A096LPI5 108 aaPredicted RBP4.06□□□□□ -1.76
VIPAS39-205ENST00000553691 TRBV7-6A0A0J9YX20 115 aa4.06□□□□□ -1.76
VIPAS39-205ENST00000553691 FAM236DA0A1B0GTK5 79 aa4.06□□□□□ -1.76
VIPAS39-205ENST00000553691 ERC2-IT1O76042 136 aa4.06□□□□□ -1.76
VIPAS39-205ENST00000553691 CHTF8P0CG12 524 aa4.06□□□□□ -1.76
VIPAS39-205ENST00000553691 FAM236CP0DP71 79 aa4.06□□□□□ -1.76
VIPAS39-205ENST00000553691 KLKP1Q107X0 134 aa4.06□□□□□ -1.76
VIPAS39-205ENST00000553691 CD164L2Q6UWJ8 174 aa4.06□□□□□ -1.76
VIPAS39-205ENST00000553691 A0A1B0GW54 56 aa4.05□□□□□ -1.76
VIPAS39-205ENST00000553691 LINC00575Q6W349 94 aa4.05□□□□□ -1.76
VIPAS39-205ENST00000553691 SPACA4Q8TDM5 124 aa4.05□□□□□ -1.76
VIPAS39-205ENST00000553691 SMIM26A0A096LP01 95 aa4.04□□□□□ -1.76
VIPAS39-205ENST00000553691 A0A0U1RQV1 116 aa4.04□□□□□ -1.76
VIPAS39-205ENST00000553691 KIAA0087Q14695 138 aa4.04□□□□□ -1.76
VIPAS39-205ENST00000553691 HIGD2BQ4VC39 106 aa4.04□□□□□ -1.76
VIPAS39-205ENST00000553691 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.04□□□□□ -1.76
VIPAS39-205ENST00000553691 Q6ZQT0 140 aa4.04□□□□□ -1.76
VIPAS39-205ENST00000553691 LAMTOR3Q9UHA4 124 aa4.04□□□□□ -1.76
VIPAS39-205ENST00000553691 A0A087WVE0 104 aa4.03□□□□□ -1.76
VIPAS39-205ENST00000553691 PLAC8Q9NZF1 115 aa4.03□□□□□ -1.76
VIPAS39-205ENST00000553691 TRAV23DV6A0A075B6W5 121 aa4.02□□□□□ -1.77
VIPAS39-205ENST00000553691 A0A096LNI7 61 aa4.02□□□□□ -1.77
VIPAS39-205ENST00000553691 KRTAP10-6P60371 365 aaPredicted RBP4.02□□□□□ -1.77
VIPAS39-205ENST00000553691 RPL37AP61513 92 aaKnown RBP4.02□□□□□ -1.77
VIPAS39-205ENST00000553691 C9orf116Q5BN46 136 aaPredicted RBP4.02□□□□□ -1.77
VIPAS39-205ENST00000553691 C20orf197Q8N268 126 aa4.02□□□□□ -1.77
VIPAS39-205ENST00000553691 CRCT1Q9UGL9 99 aa4.02□□□□□ -1.77
VIPAS39-205ENST00000553691 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
VIPAS39-205ENST00000553691 FSIP2Q5CZC0 6907 aa4.02□□□□□ -1.77
VIPAS39-205ENST00000553691 TNXBP22105 4242 aa4.01□□□□□ -1.77
VIPAS39-205ENST00000553691 F8WDY8 70 aa4.01□□□□□ -1.77
VIPAS39-205ENST00000553691 MT1HL1P0DM35 61 aa4.01□□□□□ -1.77
VIPAS39-205ENST00000553691 LINC01547P58512 204 aaPredicted RBP4.01□□□□□ -1.77
VIPAS39-205ENST00000553691 C6orf99Q4VX62 202 aa4.01□□□□□ -1.77
VIPAS39-205ENST00000553691 C9orf129Q5T035 196 aaKnown RBP4.01□□□□□ -1.77
VIPAS39-205ENST00000553691 UNQ6190/PRO20217Q6UXQ8 127 aa4.01□□□□□ -1.77
VIPAS39-205ENST00000553691 H7BZZ5 65 aa4□□□□□ -1.77
VIPAS39-205ENST00000553691 IGLV6-57P01721 117 aa4□□□□□ -1.77
VIPAS39-205ENST00000553691 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
VIPAS39-205ENST00000553691 Q5XG85 94 aa4□□□□□ -1.77
VIPAS39-205ENST00000553691 Q6ZVQ6 151 aa4□□□□□ -1.77
VIPAS39-205ENST00000553691 FAM19A1Q7Z5A9 133 aa4□□□□□ -1.77
VIPAS39-205ENST00000553691 DIRC1Q969H9 104 aa4□□□□□ -1.77
VIPAS39-205ENST00000553691 TRBV7-4A0A0J9YYF1 115 aa3.99□□□□□ -1.77
VIPAS39-205ENST00000553691 COX7BP24311 80 aa3.99□□□□□ -1.77
VIPAS39-205ENST00000553691 SPAG11BQ08648 103 aa3.99□□□□□ -1.77
VIPAS39-205ENST00000553691 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
VIPAS39-205ENST00000553691 Q6ZRU5 148 aa3.99□□□□□ -1.77
VIPAS39-205ENST00000553691 IGKV2-24A0A0C4DH68 120 aa3.98□□□□□ -1.77
VIPAS39-205ENST00000553691 SYCNQ0VAF6 134 aa3.98□□□□□ -1.77
VIPAS39-205ENST00000553691 A0A1W2PNN7 141 aa3.97□□□□□ -1.77
VIPAS39-205ENST00000553691 PRR3P79522 188 aaKnown RBP3.97□□□□□ -1.77
VIPAS39-205ENST00000553691 C4orf26Q17RF5 130 aa3.97□□□□□ -1.77
VIPAS39-205ENST00000553691 HRCT1Q6UXD1 115 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms