RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 FAT3Q8TDW7 4589 aa11.44□□□□□ -0.58
PSEN1-207ENST00000553599 ATXN8Q156A1 80 aa11.44□□□□□ -0.58
PSEN1-207ENST00000553599 Q8N377 158 aa11.44□□□□□ -0.58
PSEN1-207ENST00000553599 LRP1Q07954 4544 aaKnown RBP11.44□□□□□ -0.58
PSEN1-207ENST00000553599 A0A1W2PPM0 123 aa11.43□□□□□ -0.58
PSEN1-207ENST00000553599 FABP2P12104 132 aa11.42□□□□□ -0.58
PSEN1-207ENST00000553599 KRTAP13-2Q52LG2 175 aa11.42□□□□□ -0.58
PSEN1-207ENST00000553599 TCL1BO95988 128 aa11.41□□□□□ -0.58
PSEN1-207ENST00000553599 MT1HL1P0DM35 61 aa11.41□□□□□ -0.58
PSEN1-207ENST00000553599 TYMSOSQ8TAI1 123 aa11.41□□□□□ -0.58
PSEN1-207ENST00000553599 ORMDL1Q9P0S3 153 aa11.41□□□□□ -0.58
PSEN1-207ENST00000553599 J3QL48 77 aa11.4□□□□□ -0.58
PSEN1-207ENST00000553599 SMIM29Q86T20 159 aa11.39□□□□□ -0.59
PSEN1-207ENST00000553599 SSBP3-AS1Q7Z2R9 100 aa11.38□□□□□ -0.59
PSEN1-207ENST00000553599 C3orf22Q8N5N4 141 aa11.38□□□□□ -0.59
PSEN1-207ENST00000553599 IGLV9-49A0A0B4J1Y8 123 aa11.37□□□□□ -0.59
PSEN1-207ENST00000553599 Q8NBF4 154 aa11.37□□□□□ -0.59
PSEN1-207ENST00000553599 F8WEM9 126 aa11.36□□□□□ -0.59
PSEN1-207ENST00000553599 TMEM256-PLSCR3K7ERE1 68 aa11.36□□□□□ -0.59
PSEN1-207ENST00000553599 MOBPQ13875 183 aa11.35□□□□□ -0.59
PSEN1-207ENST00000553599 C9orf153Q5TBE3 101 aa11.35□□□□□ -0.59
PSEN1-207ENST00000553599 SPCS1Q9Y6A9 102 aa11.32□□□□□ -0.6
PSEN1-207ENST00000553599 NDUFV3P56181 108 aaKnown RBP11.31□□□□□ -0.6
PSEN1-207ENST00000553599 IGLV8-61A0A075B6I0 122 aa11.3□□□□□ -0.6
PSEN1-207ENST00000553599 UBE2V1Q13404 147 aa11.3□□□□□ -0.6
PSEN1-207ENST00000553599 TNXBP22105 4242 aa11.3□□□□□ -0.6
PSEN1-207ENST00000553599 DMBT1Q9UGM3 2413 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-207ENST00000553599 BAALC-AS2P0C853 105 aa11.29□□□□□ -0.6
PSEN1-207ENST00000553599 SPAG11AQ6PDA7 123 aa11.29□□□□□ -0.6
PSEN1-207ENST00000553599 LINC00304Q8N9R0 145 aa11.29□□□□□ -0.6
PSEN1-207ENST00000553599 Q6JHZ5 121 aa11.28□□□□□ -0.6
PSEN1-207ENST00000553599 C9JAW5 83 aa11.26□□□□□ -0.61
PSEN1-207ENST00000553599 H3BMG7 143 aa11.26□□□□□ -0.61
PSEN1-207ENST00000553599 C4orf48Q5BLP8 95 aa11.26□□□□□ -0.61
PSEN1-207ENST00000553599 K7EP34 96 aa11.25□□□□□ -0.61
PSEN1-207ENST00000553599 GTF2H5Q6ZYL4 71 aa11.24□□□□□ -0.61
PSEN1-207ENST00000553599 CD164Q04900 197 aa11.23□□□□□ -0.61
PSEN1-207ENST00000553599 ANKRD29Q8N6D5 301 aa11.23□□□□□ -0.61
PSEN1-207ENST00000553599 H3BT86 120 aa11.22□□□□□ -0.61
PSEN1-207ENST00000553599 SPINK1P00995 79 aa11.22□□□□□ -0.61
PSEN1-207ENST00000553599 RPS29P62273 56 aaKnown RBP11.2□□□□□ -0.62
PSEN1-207ENST00000553599 IGFL1Q6UW32 110 aa11.18□□□□□ -0.62
PSEN1-207ENST00000553599 JMJD7-PLA2G4BH0Y9G9 81 aa11.17□□□□□ -0.62
PSEN1-207ENST00000553599 RBM3P98179 157 aaKnown RBP11.16□□□□□ -0.62
PSEN1-207ENST00000553599 Q6Q795 121 aa11.13□□□□□ -0.63
PSEN1-207ENST00000553599 MTURNQ8N3F0 131 aa11.12□□□□□ -0.63
PSEN1-207ENST00000553599 DSCR8Q96T75 97 aa11.12□□□□□ -0.63
PSEN1-207ENST00000553599 LIMD2Q9BT23 127 aa11.12□□□□□ -0.63
PSEN1-207ENST00000553599 A0A0G2JQZ4 141 aa11.11□□□□□ -0.63
PSEN1-207ENST00000553599 TRBV7-4A0A0J9YYF1 115 aa11.11□□□□□ -0.63
PSEN1-207ENST00000553599 TEN1Q86WV5 123 aa11.11□□□□□ -0.63
PSEN1-207ENST00000553599 PRO0461Q9UI25 63 aa11.11□□□□□ -0.63
PSEN1-207ENST00000553599 A0A1B0GV72 72 aa11.1□□□□□ -0.63
PSEN1-207ENST00000553599 HRCT1Q6UXD1 115 aa11.1□□□□□ -0.63
PSEN1-207ENST00000553599 OBSCN-AS1Q96MR7 158 aa11.1□□□□□ -0.63
PSEN1-207ENST00000553599 F8W1H4 67 aa11.09□□□□□ -0.63
PSEN1-207ENST00000553599 PDE6GP18545 87 aa11.09□□□□□ -0.63
PSEN1-207ENST00000553599 Q5XG85 94 aa11.09□□□□□ -0.63
PSEN1-207ENST00000553599 C21orf62-AS1Q17RA5 79 aa11.08□□□□□ -0.64
PSEN1-207ENST00000553599 TRBV7-7A0A0K0K1E9 115 aa11.07□□□□□ -0.64
PSEN1-207ENST00000553599 SMCPP49901 116 aaPredicted RBP11.07□□□□□ -0.64
PSEN1-207ENST00000553599 LOC110117498A0A087WWA1 95 aa11.06□□□□□ -0.64
PSEN1-207ENST00000553599 CCKP06307 115 aa11.05□□□□□ -0.64
PSEN1-207ENST00000553599 A0A1W2PNM2 257 aa11.04□□□□□ -0.64
PSEN1-207ENST00000553599 A0A1B0GV90 55 aa11.03□□□□□ -0.64
PSEN1-207ENST00000553599 HERC1Q15751 4861 aa11.02□□□□□ -0.65
PSEN1-207ENST00000553599 SS18L2Q9UHA2 77 aa11.02□□□□□ -0.65
PSEN1-207ENST00000553599 Q6ZQT0 140 aa11.01□□□□□ -0.65
PSEN1-207ENST00000553599 C14orf132Q9NPU4 83 aa11.01□□□□□ -0.65
PSEN1-207ENST00000553599 A0A1B0GW54 56 aa11□□□□□ -0.65
PSEN1-207ENST00000553599 ASB16-AS1Q495Z4 193 aa11□□□□□ -0.65
PSEN1-207ENST00000553599 FP248Q71RG6 208 aaPredicted RBP10.97□□□□□ -0.65
PSEN1-207ENST00000553599 VPS25Q9BRG1 176 aa10.97□□□□□ -0.65
PSEN1-207ENST00000553599 A0A087WSZ3 146 aa10.96□□□□□ -0.65
PSEN1-207ENST00000553599 RETNLBQ9BQ08 111 aa10.94□□□□□ -0.66
PSEN1-207ENST00000553599 PRR4Q16378 134 aa10.92□□□□□ -0.66
PSEN1-207ENST00000553599 ETDBQ3ZM63 59 aa10.92□□□□□ -0.66
PSEN1-207ENST00000553599 C1orf195Q5TG92 126 aa10.91□□□□□ -0.66
PSEN1-207ENST00000553599 IGLV7-46A0A075B6I9 117 aa10.87□□□□□ -0.67
PSEN1-207ENST00000553599 HMCN2Q8NDA2 5059 aa10.82□□□□□ -0.68
PSEN1-207ENST00000553599 Q96NJ1 140 aa10.81□□□□□ -0.68
PSEN1-207ENST00000553599 LINC00472Q9H8W2 130 aa10.81□□□□□ -0.68
PSEN1-207ENST00000553599 TPRXLQ17RH7 258 aa10.8□□□□□ -0.68
PSEN1-207ENST00000553599 NREPQ16612 68 aa10.77□□□□□ -0.69
PSEN1-207ENST00000553599 J3KT08 172 aa10.76□□□□□ -0.69
PSEN1-207ENST00000553599 IGKV4-1P06312 121 aa10.74□□□□□ -0.69
PSEN1-207ENST00000553599 KRTAP13-3Q3SY46 172 aa10.74□□□□□ -0.69
PSEN1-207ENST00000553599 SIGMAR1Q99720 223 aa10.72□□□□□ -0.69
PSEN1-207ENST00000553599 ACYP1P07311 99 aa10.71□□□□□ -0.69
PSEN1-207ENST00000553599 UBL5Q9BZL1 73 aa10.7□□□□□ -0.7
PSEN1-207ENST00000553599 FAM240AA0A1B0GVK7 77 aa10.69□□□□□ -0.7
PSEN1-207ENST00000553599 LINC00846Q9NV44 126 aa10.69□□□□□ -0.7
PSEN1-207ENST00000553599 DEFB116Q30KQ4 102 aa10.68□□□□□ -0.7
PSEN1-207ENST00000553599 Q6ZVQ6 151 aa10.67□□□□□ -0.7
PSEN1-207ENST00000553599 CDIP1Q9H305 208 aa10.67□□□□□ -0.7
PSEN1-207ENST00000553599 NDUFB1O75438 58 aa10.64□□□□□ -0.71
PSEN1-207ENST00000553599 J3QR89 54 aa10.63□□□□□ -0.71
PSEN1-207ENST00000553599 A8MWP4 228 aa10.62□□□□□ -0.71
PSEN1-207ENST00000553599 BPY2O14599 106 aa10.62□□□□□ -0.71
PSEN1-207ENST00000553599 A0A1B0GVX0 72 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms