RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 KMT2AQ03164 3969 aa3.78□□□□□ -1.8
VIPAS39-204ENST00000553576 DNAH17Q9UFH2 4485 aa3.78□□□□□ -1.8
VIPAS39-204ENST00000553576 KRTAP10-6P60371 365 aaPredicted RBP3.78□□□□□ -1.8
VIPAS39-204ENST00000553576 HIST1H4AP62805 103 aaKnown RBP3.78□□□□□ -1.8
VIPAS39-204ENST00000553576 UBL5Q9BZL1 73 aa3.78□□□□□ -1.8
VIPAS39-204ENST00000553576 HECTD4Q9Y4D8 3996 aa3.78□□□□□ -1.81
VIPAS39-204ENST00000553576 ANAPC13Q9BS18 74 aa3.77□□□□□ -1.81
VIPAS39-204ENST00000553576 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.76□□□□□ -1.81
VIPAS39-204ENST00000553576 A0A087WTM6 91 aa3.76□□□□□ -1.81
VIPAS39-204ENST00000553576 IGKV2-24A0A0C4DH68 120 aa3.76□□□□□ -1.81
VIPAS39-204ENST00000553576 M0R2N4 97 aa3.76□□□□□ -1.81
VIPAS39-204ENST00000553576 CXCL6P80162 114 aa3.76□□□□□ -1.81
VIPAS39-204ENST00000553576 IGLV8-61A0A075B6I0 122 aa3.75□□□□□ -1.81
VIPAS39-204ENST00000553576 IGKV3D-7A0A0C4DH55 119 aa3.75□□□□□ -1.81
VIPAS39-204ENST00000553576 BCE1O60756 84 aa3.75□□□□□ -1.81
VIPAS39-204ENST00000553576 ERC2-IT1O76042 136 aa3.75□□□□□ -1.81
VIPAS39-204ENST00000553576 SPRR1BP22528 89 aa3.75□□□□□ -1.81
VIPAS39-204ENST00000553576 UBE2BP63146 152 aa3.75□□□□□ -1.81
VIPAS39-204ENST00000553576 Q6ZVQ6 151 aa3.75□□□□□ -1.81
VIPAS39-204ENST00000553576 SMIM29Q86T20 159 aa3.75□□□□□ -1.81
VIPAS39-204ENST00000553576 SPRR4Q96PI1 79 aa3.75□□□□□ -1.81
VIPAS39-204ENST00000553576 DNHD1Q96M86 4753 aa3.74□□□□□ -1.81
VIPAS39-204ENST00000553576 FAM236AA0A1B0GUQ0 79 aa3.74□□□□□ -1.81
VIPAS39-204ENST00000553576 FAM236BA0A1B0GV22 79 aa3.74□□□□□ -1.81
VIPAS39-204ENST00000553576 PHF5AQ7RTV0 110 aaKnown RBP3.74□□□□□ -1.81
VIPAS39-204ENST00000553576 FAM19A1Q7Z5A9 133 aa3.74□□□□□ -1.81
VIPAS39-204ENST00000553576 ST20-AS1Q8NBB2 130 aa3.74□□□□□ -1.81
VIPAS39-204ENST00000553576 DEFB105AQ8NG35 78 aa3.74□□□□□ -1.81
VIPAS39-204ENST00000553576 SPACA4Q8TDM5 124 aa3.74□□□□□ -1.81
VIPAS39-204ENST00000553576 TENM2Q9NT68 2774 aa3.74□□□□□ -1.81
VIPAS39-204ENST00000553576 ATOX1O00244 68 aa3.73□□□□□ -1.81
VIPAS39-204ENST00000553576 CHTF8P0CG12 524 aa3.73□□□□□ -1.81
VIPAS39-204ENST00000553576 C1orf134Q5TEV5 83 aa3.73□□□□□ -1.81
VIPAS39-204ENST00000553576 KRTAP13-1Q8IUC0 172 aa3.73□□□□□ -1.81
VIPAS39-204ENST00000553576 KRTAP11-1Q8IUC1 163 aa3.73□□□□□ -1.81
VIPAS39-204ENST00000553576 FRAS1Q86XX4 4008 aa3.73□□□□□ -1.81
VIPAS39-204ENST00000553576 A0A1W2PNM2 257 aa3.72□□□□□ -1.81
VIPAS39-204ENST00000553576 C1orf137Q5JT78 98 aa3.72□□□□□ -1.81
VIPAS39-204ENST00000553576 Q8NBF4 154 aa3.72□□□□□ -1.81
VIPAS39-204ENST00000553576 DNAH8Q96JB1 4490 aa3.72□□□□□ -1.81
VIPAS39-204ENST00000553576 ALMS1Q8TCU4 4167 aa3.71□□□□□ -1.82
VIPAS39-204ENST00000553576 PANO1I0J062 215 aa3.71□□□□□ -1.82
VIPAS39-204ENST00000553576 UQCRQO14949 82 aa3.71□□□□□ -1.82
VIPAS39-204ENST00000553576 CRYGAP11844 174 aa3.71□□□□□ -1.82
VIPAS39-204ENST00000553576 COX7CP15954 63 aa3.71□□□□□ -1.82
VIPAS39-204ENST00000553576 FUSP35637 526 aaKnown RBP eCLIP3.71□□□□□ -1.82
VIPAS39-204ENST00000553576 HAMPP81172 84 aa3.71□□□□□ -1.82
VIPAS39-204ENST00000553576 NREPQ16612 68 aa3.71□□□□□ -1.82
VIPAS39-204ENST00000553576 PLAC8Q9NZF1 115 aa3.71□□□□□ -1.82
VIPAS39-204ENST00000553576 A0A087WVE0 104 aa3.7□□□□□ -1.82
VIPAS39-204ENST00000553576 C3orf84H3BNL1 204 aa3.7□□□□□ -1.82
VIPAS39-204ENST00000553576 CCDC179H3BU77 68 aa3.7□□□□□ -1.82
VIPAS39-204ENST00000553576 RTL8CO15255 209 aa3.7□□□□□ -1.82
VIPAS39-204ENST00000553576 PRLHP81277 87 aa3.7□□□□□ -1.82
VIPAS39-204ENST00000553576 C3orf22Q8N5N4 141 aa3.7□□□□□ -1.82
VIPAS39-204ENST00000553576 LINC00476Q8WZB0 136 aa3.7□□□□□ -1.82
VIPAS39-204ENST00000553576 DPH3Q96FX2 82 aa3.7□□□□□ -1.82
VIPAS39-204ENST00000553576 F8WEM9 126 aa3.69□□□□□ -1.82
VIPAS39-204ENST00000553576 UBE2AP49459 152 aa3.69□□□□□ -1.82
VIPAS39-204ENST00000553576 IGFL1Q6UW32 110 aa3.69□□□□□ -1.82
VIPAS39-204ENST00000553576 SMIM20Q8N5G0 67 aa3.69□□□□□ -1.82
VIPAS39-204ENST00000553576 SERP2Q8N6R1 65 aa3.69□□□□□ -1.82
VIPAS39-204ENST00000553576 HIGD2AQ9BW72 106 aa3.69□□□□□ -1.82
VIPAS39-204ENST00000553576 IGLV5-52A0A0A0MRZ9 124 aa3.68□□□□□ -1.82
VIPAS39-204ENST00000553576 LY6G6CO95867 125 aa3.68□□□□□ -1.82
VIPAS39-204ENST00000553576 RPL37AP61513 92 aaKnown RBP3.68□□□□□ -1.82
VIPAS39-204ENST00000553576 DNAH11Q96DT5 4516 aa3.68□□□□□ -1.82
VIPAS39-204ENST00000553576 MEGF8Q7Z7M0 2845 aa3.68□□□□□ -1.82
VIPAS39-204ENST00000553576 BPY2O14599 106 aa3.67□□□□□ -1.82
VIPAS39-204ENST00000553576 LINC00483Q53H64 154 aa3.67□□□□□ -1.82
VIPAS39-204ENST00000553576 DNAH5Q8TE73 4624 aa3.66□□□□□ -1.82
VIPAS39-204ENST00000553576 TRAV7A0A075B6U4 112 aa3.66□□□□□ -1.82
VIPAS39-204ENST00000553576 IGKV4-1P06312 121 aa3.66□□□□□ -1.82
VIPAS39-204ENST00000553576 PSORS1C2Q9UIG4 136 aa3.66□□□□□ -1.82
VIPAS39-204ENST00000553576 ZNF861PO60384 105 aa3.65□□□□□ -1.83
VIPAS39-204ENST00000553576 ZNF706Q9Y5V0 76 aaPredicted RBP3.65□□□□□ -1.83
VIPAS39-204ENST00000553576 TGP01266 2768 aa3.65□□□□□ -1.83
VIPAS39-204ENST00000553576 PKD1P98161 4303 aa3.65□□□□□ -1.83
VIPAS39-204ENST00000553576 DSCR10P59022 87 aa3.64□□□□□ -1.83
VIPAS39-204ENST00000553576 C9orf153Q5TBE3 101 aa3.64□□□□□ -1.83
VIPAS39-204ENST00000553576 Q6ZSA8 131 aa3.64□□□□□ -1.83
VIPAS39-204ENST00000553576 FAT2Q9NYQ8 4349 aa3.63□□□□□ -1.83
VIPAS39-204ENST00000553576 SCXQ7RTU7 201 aa3.63□□□□□ -1.83
VIPAS39-204ENST00000553576 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
VIPAS39-204ENST00000553576 FBN3Q75N90 2809 aa3.62□□□□□ -1.83
VIPAS39-204ENST00000553576 IGLV7-43P04211 117 aa3.62□□□□□ -1.83
VIPAS39-204ENST00000553576 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
VIPAS39-204ENST00000553576 LINC00472Q9H8W2 130 aa3.62□□□□□ -1.83
VIPAS39-204ENST00000553576 HYDINQ4G0P3 5121 aa3.62□□□□□ -1.83
VIPAS39-204ENST00000553576 A0A087WSZ3 146 aa3.61□□□□□ -1.83
VIPAS39-204ENST00000553576 A0A0G2JQZ4 141 aa3.61□□□□□ -1.83
VIPAS39-204ENST00000553576 OCR1Q9BZK8 76 aa3.61□□□□□ -1.83
VIPAS39-204ENST00000553576 J3KT08 172 aa3.6□□□□□ -1.83
VIPAS39-204ENST00000553576 KLKP1Q107X0 134 aa3.6□□□□□ -1.83
VIPAS39-204ENST00000553576 Q8N9L7 120 aa3.6□□□□□ -1.83
VIPAS39-204ENST00000553576 Q8N9P0 234 aaPredicted RBP3.6□□□□□ -1.83
VIPAS39-204ENST00000553576 CIRBP-AS1Q8TBR5 109 aa3.6□□□□□ -1.83
VIPAS39-204ENST00000553576 SACSQ9NZJ4 4579 aa3.6□□□□□ -1.83
VIPAS39-204ENST00000553576 SRRM2Q9UQ35 2752 aaKnown RBP3.6□□□□□ -1.83
VIPAS39-204ENST00000553576 LCE6AA0A183 80 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms