RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 CEND1Q8N111 149 aa6.63□□□□□ -1.35
SRP54-203ENST00000553544 ST20-AS1Q8NBB2 130 aa6.63□□□□□ -1.35
SRP54-203ENST00000553544 TEX49A0A1B0GTD5 131 aa6.62□□□□□ -1.35
SRP54-203ENST00000553544 SPRR1BP22528 89 aa6.62□□□□□ -1.35
SRP54-203ENST00000553544 RPS29P62273 56 aaKnown RBP6.62□□□□□ -1.35
SRP54-203ENST00000553544 C9orf153Q5TBE3 101 aa6.62□□□□□ -1.35
SRP54-203ENST00000553544 C2orf91Q6ZV80 131 aa6.62□□□□□ -1.35
SRP54-203ENST00000553544 C12orf57Q99622 126 aa6.62□□□□□ -1.35
SRP54-203ENST00000553544 Q1RN00 199 aa6.61□□□□□ -1.35
SRP54-203ENST00000553544 GHRHP01286 108 aa6.6□□□□□ -1.35
SRP54-203ENST00000553544 SMIM6P0DI80 62 aa6.6□□□□□ -1.35
SRP54-203ENST00000553544 hADV29S1A0JD25 119 aa6.59□□□□□ -1.35
SRP54-203ENST00000553544 CFC1BP0CG36 223 aa6.59□□□□□ -1.35
SRP54-203ENST00000553544 CFC1P0CG37 223 aa6.59□□□□□ -1.35
SRP54-203ENST00000553544 Q8N377 158 aa6.59□□□□□ -1.35
SRP54-203ENST00000553544 H0YGX0 51 aa6.58□□□□□ -1.36
SRP54-203ENST00000553544 LINC00575Q6W349 94 aa6.58□□□□□ -1.36
SRP54-203ENST00000553544 PRO1854Q9UHT4 67 aa6.58□□□□□ -1.36
SRP54-203ENST00000553544 IGLV5-48A0A075B6I7 105 aa6.57□□□□□ -1.36
SRP54-203ENST00000553544 F8WEM9 126 aa6.57□□□□□ -1.36
SRP54-203ENST00000553544 H7C2G1 150 aa6.57□□□□□ -1.36
SRP54-203ENST00000553544 PPDPFLQ8WWR9 84 aa6.57□□□□□ -1.36
SRP54-203ENST00000553544 OCIAD2Q56VL3 154 aa6.56□□□□□ -1.36
SRP54-203ENST00000553544 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.56□□□□□ -1.36
SRP54-203ENST00000553544 DEFB105AQ8NG35 78 aa6.56□□□□□ -1.36
SRP54-203ENST00000553544 A0A1B0GX51 115 aa6.55□□□□□ -1.36
SRP54-203ENST00000553544 COX6CP09669 75 aa6.55□□□□□ -1.36
SRP54-203ENST00000553544 LIMD2Q9BT23 127 aa6.55□□□□□ -1.36
SRP54-203ENST00000553544 LOC100996750A0A140TA64 210 aa6.54□□□□□ -1.36
SRP54-203ENST00000553544 FXYD2P54710 66 aa6.54□□□□□ -1.36
SRP54-203ENST00000553544 Q6ZQY7 126 aa6.54□□□□□ -1.36
SRP54-203ENST00000553544 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
SRP54-203ENST00000553544 PRO1933Q9H354 126 aa6.54□□□□□ -1.36
SRP54-203ENST00000553544 M0R143 59 aa6.53□□□□□ -1.36
SRP54-203ENST00000553544 CD164Q04900 197 aa6.53□□□□□ -1.36
SRP54-203ENST00000553544 XP32Q5T750 250 aa6.53□□□□□ -1.36
SRP54-203ENST00000553544 TSTD3H0UI37 97 aa6.52□□□□□ -1.37
SRP54-203ENST00000553544 MT1HP80294 61 aa6.52□□□□□ -1.37
SRP54-203ENST00000553544 H3BQ85 93 aa6.51□□□□□ -1.37
SRP54-203ENST00000553544 DNAL4O96015 105 aa6.51□□□□□ -1.37
SRP54-203ENST00000553544 SMIM29Q86T20 159 aa6.51□□□□□ -1.37
SRP54-203ENST00000553544 PSMB2P49721 201 aa6.5□□□□□ -1.37
SRP54-203ENST00000553544 Q6JHZ5 121 aa6.5□□□□□ -1.37
SRP54-203ENST00000553544 SNHG12Q9BXW3 62 aa6.49□□□□□ -1.37
SRP54-203ENST00000553544 KRTAP19-2Q3LHN2 52 aa6.48□□□□□ -1.37
SRP54-203ENST00000553544 TRIAP1O43715 76 aa6.47□□□□□ -1.37
SRP54-203ENST00000553544 HRCT1Q6UXD1 115 aa6.47□□□□□ -1.37
SRP54-203ENST00000553544 KRTAP10-6P60371 365 aaPredicted RBP6.46□□□□□ -1.38
SRP54-203ENST00000553544 K7ERJ3 54 aa6.45□□□□□ -1.38
SRP54-203ENST00000553544 Q5XG85 94 aa6.45□□□□□ -1.38
SRP54-203ENST00000553544 CLEC2BQ92478 149 aa6.45□□□□□ -1.38
SRP54-203ENST00000553544 IGLV8-61A0A075B6I0 122 aa6.44□□□□□ -1.38
SRP54-203ENST00000553544 TCL1BO95988 128 aa6.44□□□□□ -1.38
SRP54-203ENST00000553544 SCGB1C2P0DMR2 95 aa6.44□□□□□ -1.38
SRP54-203ENST00000553544 PCOTHQ58A44 107 aa6.44□□□□□ -1.38
SRP54-203ENST00000553544 LYRM7Q5U5X0 104 aa6.44□□□□□ -1.38
SRP54-203ENST00000553544 ORMDL1Q9P0S3 153 aa6.44□□□□□ -1.38
SRP54-203ENST00000553544 M0R2T5 61 aa6.43□□□□□ -1.38
SRP54-203ENST00000553544 A0A0G2JQZ4 141 aa6.42□□□□□ -1.38
SRP54-203ENST00000553544 FAM218AQ96MZ4 157 aa6.42□□□□□ -1.38
SRP54-203ENST00000553544 LOC105371267A0A1B0GV96 52 aa6.41□□□□□ -1.38
SRP54-203ENST00000553544 TMEM256-PLSCR3K7ERE1 68 aa6.41□□□□□ -1.38
SRP54-203ENST00000553544 TRACP01848 142 aa6.41□□□□□ -1.38
SRP54-203ENST00000553544 FABP2P12104 132 aa6.4□□□□□ -1.38
SRP54-203ENST00000553544 KRTAP9-7A8MTY7 169 aa6.39□□□□□ -1.39
SRP54-203ENST00000553544 NDUFV3P56181 108 aaKnown RBP6.39□□□□□ -1.39
SRP54-203ENST00000553544 C1orf195Q5TG92 126 aa6.39□□□□□ -1.39
SRP54-203ENST00000553544 SS18L2Q9UHA2 77 aa6.39□□□□□ -1.39
SRP54-203ENST00000553544 IGFL1Q6UW32 110 aa6.38□□□□□ -1.39
SRP54-203ENST00000553544 TRBV7-7A0A0K0K1E9 115 aa6.37□□□□□ -1.39
SRP54-203ENST00000553544 H3BMG7 143 aa6.37□□□□□ -1.39
SRP54-203ENST00000553544 LST1O00453 97 aa6.37□□□□□ -1.39
SRP54-203ENST00000553544 C9orf92A6NGG3 77 aa6.36□□□□□ -1.39
SRP54-203ENST00000553544 UBE2V1Q13404 147 aa6.36□□□□□ -1.39
SRP54-203ENST00000553544 ATXN8Q156A1 80 aa6.36□□□□□ -1.39
SRP54-203ENST00000553544 Q6Q795 121 aa6.36□□□□□ -1.39
SRP54-203ENST00000553544 TEN1Q86WV5 123 aa6.36□□□□□ -1.39
SRP54-203ENST00000553544 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.35□□□□□ -1.39
SRP54-203ENST00000553544 H3BUT2 72 aa6.35□□□□□ -1.39
SRP54-203ENST00000553544 BATFQ16520 125 aa6.34□□□□□ -1.39
SRP54-203ENST00000553544 COX6B2Q6YFQ2 88 aa6.34□□□□□ -1.39
SRP54-203ENST00000553544 TRBV20-1A0A075B6N2 111 aa6.33□□□□□ -1.4
SRP54-203ENST00000553544 C21orf62-AS1Q17RA5 79 aa6.32□□□□□ -1.4
SRP54-203ENST00000553544 ANKRD29Q8N6D5 301 aa6.32□□□□□ -1.4
SRP54-203ENST00000553544 DSCR8Q96T75 97 aa6.3□□□□□ -1.4
SRP54-203ENST00000553544 RBM3P98179 157 aaKnown RBP6.29□□□□□ -1.4
SRP54-203ENST00000553544 TRBV7-4A0A0J9YYF1 115 aa6.28□□□□□ -1.4
SRP54-203ENST00000553544 JMJD7-PLA2G4BH0Y9G9 81 aa6.28□□□□□ -1.4
SRP54-203ENST00000553544 BAALC-AS2P0C853 105 aa6.28□□□□□ -1.4
SRP54-203ENST00000553544 A0A087WSZ3 146 aa6.27□□□□□ -1.41
SRP54-203ENST00000553544 RPL37P61927 97 aaKnown RBP6.27□□□□□ -1.41
SRP54-203ENST00000553544 FLGP20930 4061 aaPredicted RBP6.26□□□□□ -1.41
SRP54-203ENST00000553544 C9orf118A6NHY6 69 aa6.26□□□□□ -1.41
SRP54-203ENST00000553544 CCKP06307 115 aa6.26□□□□□ -1.41
SRP54-203ENST00000553544 PDE6GP18545 87 aa6.25□□□□□ -1.41
SRP54-203ENST00000553544 NAA38Q9BRA0 125 aaKnown RBP6.25□□□□□ -1.41
SRP54-203ENST00000553544 A0A1B0GV72 72 aa6.24□□□□□ -1.41
SRP54-203ENST00000553544 C9JAW5 83 aa6.24□□□□□ -1.41
SRP54-203ENST00000553544 A0A1B0GW54 56 aa6.23□□□□□ -1.41
SRP54-203ENST00000553544 A0A1W2PPM0 123 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms