RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 LINC00322Q6ZN03 302 aaPredicted RBP3.7□□□□□ -1.82
LETMD1-233ENST00000552433 Q6ZTI0 123 aa3.7□□□□□ -1.82
LETMD1-233ENST00000552433 WFDC10AQ9H1F0 79 aa3.7□□□□□ -1.82
LETMD1-233ENST00000552433 IGKV3OR2-268A0A0C4DH90 116 aa3.69□□□□□ -1.82
LETMD1-233ENST00000552433 SONP18583 2426 aaKnown RBP3.69□□□□□ -1.82
LETMD1-233ENST00000552433 MXRA5Q9NR99 2828 aa3.68□□□□□ -1.82
LETMD1-233ENST00000552433 HIVEP2P31629 2446 aa3.68□□□□□ -1.82
LETMD1-233ENST00000552433 IGLV4-69A0A075B6H9 119 aa3.68□□□□□ -1.82
LETMD1-233ENST00000552433 CTSGP08311 255 aa3.68□□□□□ -1.82
LETMD1-233ENST00000552433 FXYD3Q14802 87 aa3.68□□□□□ -1.82
LETMD1-233ENST00000552433 TIMM8BQ9Y5J9 83 aaPredicted RBP3.68□□□□□ -1.82
LETMD1-233ENST00000552433 SPINK7P58062 85 aa3.67□□□□□ -1.82
LETMD1-233ENST00000552433 SPINT4Q6UDR6 99 aa3.67□□□□□ -1.82
LETMD1-233ENST00000552433 GAFA1Q96PS6 74 aa3.67□□□□□ -1.82
LETMD1-233ENST00000552433 DOCK10Q96BY6 2186 aa3.66□□□□□ -1.82
LETMD1-233ENST00000552433 H0YGX0 51 aa3.66□□□□□ -1.82
LETMD1-233ENST00000552433 ARL14EPLP0DKL9 152 aa3.66□□□□□ -1.82
LETMD1-233ENST00000552433 COX17Q14061 63 aa3.66□□□□□ -1.82
LETMD1-233ENST00000552433 KLK9Q9UKQ9 250 aa3.66□□□□□ -1.82
LETMD1-233ENST00000552433 TRGV4A0A0C4DH28 118 aa3.65□□□□□ -1.83
LETMD1-233ENST00000552433 SPTY2D1-AS1A0A0U1RR47 76 aa3.65□□□□□ -1.83
LETMD1-233ENST00000552433 TRBV6-4A0A1B0GX49 114 aa3.65□□□□□ -1.83
LETMD1-233ENST00000552433 ZNF861PO60384 105 aa3.65□□□□□ -1.83
LETMD1-233ENST00000552433 IGLV3-1P01715 115 aa3.65□□□□□ -1.83
LETMD1-233ENST00000552433 RNASE3P12724 160 aaKnown RBP3.64□□□□□ -1.83
LETMD1-233ENST00000552433 ZNF625Q96I27 306 aaPredicted RBP3.64□□□□□ -1.83
LETMD1-233ENST00000552433 PKD1L1Q8TDX9 2849 aa3.64□□□□□ -1.83
LETMD1-233ENST00000552433 TGP01266 2768 aa3.63□□□□□ -1.83
LETMD1-233ENST00000552433 IGKV2-40A0A087WW87 121 aaPredicted RBP3.63□□□□□ -1.83
LETMD1-233ENST00000552433 NDUFA3O95167 84 aa3.63□□□□□ -1.83
LETMD1-233ENST00000552433 IGKV2D-40P01614 121 aaPredicted RBP3.63□□□□□ -1.83
LETMD1-233ENST00000552433 LY6EQ16553 131 aa3.63□□□□□ -1.83
LETMD1-233ENST00000552433 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
LETMD1-233ENST00000552433 SMR3AQ99954 134 aa3.63□□□□□ -1.83
LETMD1-233ENST00000552433 R4GN34 69 aa3.63□□□□□ -1.83
LETMD1-233ENST00000552433 CUBNO60494 3623 aa3.63□□□□□ -1.83
LETMD1-233ENST00000552433 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.62□□□□□ -1.834e-11■■■■□ 22.8
LETMD1-233ENST00000552433 SEC16AO15027 2179 aa3.62□□□□□ -1.83
LETMD1-233ENST00000552433 ANK2Q01484 3957 aa3.62□□□□□ -1.83
LETMD1-233ENST00000552433 LOC110117498A0A087WWA1 95 aa3.62□□□□□ -1.83
LETMD1-233ENST00000552433 NDUFA4O00483 81 aa3.62□□□□□ -1.83
LETMD1-233ENST00000552433 DEFB112Q30KQ8 113 aa3.62□□□□□ -1.83
LETMD1-233ENST00000552433 MGAM2Q2M2H8 2515 aa3.62□□□□□ -1.83
LETMD1-233ENST00000552433 A0A087WTM6 91 aa3.6□□□□□ -1.83
LETMD1-233ENST00000552433 A0A1W2PNN7 141 aa3.6□□□□□ -1.83
LETMD1-233ENST00000552433 VPS13CQ709C8 3753 aa3.59□□□□□ -1.83
LETMD1-233ENST00000552433 KCNQ1DNQ9H478 68 aa3.59□□□□□ -1.83
LETMD1-233ENST00000552433 NBDYA0A0U1RRE5 68 aa3.58□□□□□ -1.84
LETMD1-233ENST00000552433 COA5Q86WW8 74 aa3.58□□□□□ -1.84
LETMD1-233ENST00000552433 WNK1Q9H4A3 2382 aa3.58□□□□□ -1.84
LETMD1-233ENST00000552433 ETDCA0A1B0GVM5 59 aa3.57□□□□□ -1.84
LETMD1-233ENST00000552433 ABCA1O95477 2261 aa3.57□□□□□ -1.84
LETMD1-233ENST00000552433 HAMPP81172 84 aa3.57□□□□□ -1.84
LETMD1-233ENST00000552433 ZANQ9Y493 2812 aa3.57□□□□□ -1.84
LETMD1-233ENST00000552433 PRR14LQ5THK1 2151 aa3.56□□□□□ -1.84
LETMD1-233ENST00000552433 LINC00959A0A1B0GUT2 108 aa3.56□□□□□ -1.84
LETMD1-233ENST00000552433 RPL37AP61513 92 aaKnown RBP3.56□□□□□ -1.84
LETMD1-233ENST00000552433 LINC00472Q9H8W2 130 aa3.56□□□□□ -1.84
LETMD1-233ENST00000552433 USF3Q68DE3 2245 aa3.55□□□□□ -1.84
LETMD1-233ENST00000552433 TRGV2A0A075B6R0 118 aa3.55□□□□□ -1.84
LETMD1-233ENST00000552433 HRNRQ86YZ3 2850 aaPredicted RBP3.55□□□□□ -1.84
LETMD1-233ENST00000552433 MEGF8Q7Z7M0 2845 aa3.55□□□□□ -1.84
LETMD1-233ENST00000552433 NBEAL2Q6ZNJ1 2754 aa3.55□□□□□ -1.84
LETMD1-233ENST00000552433 FREM1Q5H8C1 2179 aa3.54□□□□□ -1.84
LETMD1-233ENST00000552433 TRGV1A0A0A0MS02 117 aa3.54□□□□□ -1.84
LETMD1-233ENST00000552433 C5orf56Q8N8D9 126 aa3.54□□□□□ -1.84
LETMD1-233ENST00000552433 TNCP24821 2201 aa3.54□□□□□ -1.84
LETMD1-233ENST00000552433 COX7BP24311 80 aa3.53□□□□□ -1.84
LETMD1-233ENST00000552433 SVEP1Q4LDE5 3571 aa3.52□□□□□ -1.85
LETMD1-233ENST00000552433 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.52□□□□□ -1.85
LETMD1-233ENST00000552433 Q96NJ1 140 aa3.52□□□□□ -1.85
LETMD1-233ENST00000552433 A0A1B0GU69 56 aa3.51□□□□□ -1.85
LETMD1-233ENST00000552433 IGKV2-29A2NJV5 120 aaPredicted RBP3.51□□□□□ -1.85
LETMD1-233ENST00000552433 IGKV4-1P06312 121 aa3.51□□□□□ -1.85
LETMD1-233ENST00000552433 RPL38P63173 70 aaKnown RBP3.51□□□□□ -1.85
LETMD1-233ENST00000552433 A0A0G2JQZ4 141 aa3.5□□□□□ -1.85
LETMD1-233ENST00000552433 HRES1P13985 223 aa3.5□□□□□ -1.85
LETMD1-233ENST00000552433 C10orf55Q5SWW7 151 aa3.5□□□□□ -1.85
LETMD1-233ENST00000552433 NCR3O14931 201 aa3.49□□□□□ -1.85
LETMD1-233ENST00000552433 MRPL33O75394 65 aaKnown RBP3.49□□□□□ -1.85
LETMD1-233ENST00000552433 CNFNQ9BYD5 112 aa3.49□□□□□ -1.85
LETMD1-233ENST00000552433 TFF3Q07654 80 aa3.48□□□□□ -1.85
LETMD1-233ENST00000552433 TPRXLQ17RH7 258 aa3.48□□□□□ -1.85
LETMD1-233ENST00000552433 SMIM2Q9BVW6 85 aa3.48□□□□□ -1.85
LETMD1-233ENST00000552433 PRKDCP78527 4128 aaKnown RBP3.47□□□□□ -1.85
LETMD1-233ENST00000552433 ALPK2Q86TB3 2170 aa3.47□□□□□ -1.85
LETMD1-233ENST00000552433 IGLV4-60A0A075B6I1 120 aa3.47□□□□□ -1.85
LETMD1-233ENST00000552433 ANAPC11Q9NYG5 84 aa3.47□□□□□ -1.85
LETMD1-233ENST00000552433 IGLV6-57P01721 117 aa3.46□□□□□ -1.86
LETMD1-233ENST00000552433 ACYP2P14621 99 aa3.46□□□□□ -1.86
LETMD1-233ENST00000552433 KRTAP10-1P60331 282 aa3.46□□□□□ -1.86
LETMD1-233ENST00000552433 DEFB134Q4QY38 66 aa3.46□□□□□ -1.86
LETMD1-233ENST00000552433 SPACA4Q8TDM5 124 aa3.46□□□□□ -1.86
LETMD1-233ENST00000552433 ANK3Q12955 4377 aaKnown RBP3.46□□□□□ -1.86
LETMD1-233ENST00000552433 INE1O15225 51 aa3.45□□□□□ -1.86
LETMD1-233ENST00000552433 IAPPP10997 89 aa3.45□□□□□ -1.86
LETMD1-233ENST00000552433 FXYD4P59646 89 aa3.45□□□□□ -1.86
LETMD1-233ENST00000552433 RPS27LQ71UM5 84 aaKnown RBP3.45□□□□□ -1.86
LETMD1-233ENST00000552433 LINC00304Q8N9R0 145 aa3.45□□□□□ -1.86
LETMD1-233ENST00000552433 ROS1P08922 2347 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms