RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 NHP2Q9NX24 153 aaKnown RBP9.34□□□□□ -0.91
RPAP3-207ENST00000551293 SLC7A5P1Q8MH63 180 aa9.33□□□□□ -0.92
RPAP3-207ENST00000551293 SMIM11BQ8TCY0 68 aa9.33□□□□□ -0.92
RPAP3-207ENST00000551293 CLEC2BQ92478 149 aa9.33□□□□□ -0.92
RPAP3-207ENST00000551293 FAM236DA0A1B0GTK5 79 aa9.32□□□□□ -0.92
RPAP3-207ENST00000551293 A4D1N5 150 aa9.32□□□□□ -0.92
RPAP3-207ENST00000551293 FAM236CP0DP71 79 aa9.32□□□□□ -0.92
RPAP3-207ENST00000551293 SCGB1D4Q6XE38 83 aa9.32□□□□□ -0.92
RPAP3-207ENST00000551293 Q6JHZ5 121 aa9.3□□□□□ -0.92
RPAP3-207ENST00000551293 LST1O00453 97 aa9.29□□□□□ -0.92
RPAP3-207ENST00000551293 MUSTN1Q8IVN3 82 aa9.29□□□□□ -0.92
RPAP3-207ENST00000551293 C20orf166-AS1Q96NR2 134 aa9.29□□□□□ -0.92
RPAP3-207ENST00000551293 LINC01545Q5VT33 79 aa9.28□□□□□ -0.92
RPAP3-207ENST00000551293 Q6ZQY7 126 aa9.28□□□□□ -0.92
RPAP3-207ENST00000551293 A8MUU9 505 aa9.27□□□□□ -0.93
RPAP3-207ENST00000551293 OCIAD2Q56VL3 154 aa9.26□□□□□ -0.93
RPAP3-207ENST00000551293 TRAV13-2A0A0B4J235 113 aa9.24□□□□□ -0.93
RPAP3-207ENST00000551293 H3BUT2 72 aa9.24□□□□□ -0.93
RPAP3-207ENST00000551293 IFITM1P13164 125 aa9.24□□□□□ -0.93
RPAP3-207ENST00000551293 LINC00575Q6W349 94 aa9.24□□□□□ -0.93
RPAP3-207ENST00000551293 KRTAP16-1A8MUX0 517 aa9.23□□□□□ -0.93
RPAP3-207ENST00000551293 COPS9Q8WXC6 57 aa9.23□□□□□ -0.93
RPAP3-207ENST00000551293 PET117Q6UWS5 81 aa9.22□□□□□ -0.93
RPAP3-207ENST00000551293 hADV29S1A0JD25 119 aa9.21□□□□□ -0.94
RPAP3-207ENST00000551293 DSCR10P59022 87 aa9.21□□□□□ -0.94
RPAP3-207ENST00000551293 VAMP3Q15836 100 aa9.21□□□□□ -0.94
RPAP3-207ENST00000551293 ANKRD39Q53RE8 183 aa9.2□□□□□ -0.94
RPAP3-207ENST00000551293 C3orf79P0CE67 100 aa9.17□□□□□ -0.94
RPAP3-207ENST00000551293 KRTAP19-6Q3LI70 58 aa9.17□□□□□ -0.94
RPAP3-207ENST00000551293 LINC00846Q9NV44 126 aa9.17□□□□□ -0.94
RPAP3-207ENST00000551293 COLCA2A8K830 154 aa9.16□□□□□ -0.94
RPAP3-207ENST00000551293 SNHG12Q9BXW3 62 aa9.16□□□□□ -0.94
RPAP3-207ENST00000551293 Q6ZVH6 145 aa9.15□□□□□ -0.94
RPAP3-207ENST00000551293 ATOH7Q8N100 152 aa9.15□□□□□ -0.94
RPAP3-207ENST00000551293 HRES1P13985 223 aa9.14□□□□□ -0.95
RPAP3-207ENST00000551293 KRTDAPP60985 99 aa9.14□□□□□ -0.95
RPAP3-207ENST00000551293 RBM12B-AS1Q9P1G2 102 aa9.14□□□□□ -0.95
RPAP3-207ENST00000551293 HIST1H2BKO60814 126 aa9.11□□□□□ -0.95
RPAP3-207ENST00000551293 HIST1H2BJP06899 126 aa9.11□□□□□ -0.95
RPAP3-207ENST00000551293 HIST1H2BOP23527 126 aa9.11□□□□□ -0.95
RPAP3-207ENST00000551293 HIST1H2BBP33778 126 aa9.11□□□□□ -0.95
RPAP3-207ENST00000551293 HIST1H2BDP58876 126 aa9.11□□□□□ -0.95
RPAP3-207ENST00000551293 HIST1H2BCP62807 126 aa9.11□□□□□ -0.95
RPAP3-207ENST00000551293 HIST2H2BEQ16778 126 aa9.11□□□□□ -0.95
RPAP3-207ENST00000551293 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.11□□□□□ -0.95
RPAP3-207ENST00000551293 MPLKIPQ8TAP9 179 aa9.11□□□□□ -0.95
RPAP3-207ENST00000551293 HIST1H2BHQ93079 126 aa9.11□□□□□ -0.95
RPAP3-207ENST00000551293 HIST1H2BNQ99877 126 aa9.11□□□□□ -0.95
RPAP3-207ENST00000551293 HIST1H2BMQ99879 126 aa9.11□□□□□ -0.95
RPAP3-207ENST00000551293 SS18L2Q9UHA2 77 aa9.11□□□□□ -0.95
RPAP3-207ENST00000551293 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.1□□□□□ -0.95
RPAP3-207ENST00000551293 A0A087WSZ3 146 aa9.09□□□□□ -0.95
RPAP3-207ENST00000551293 KRTAP6-3Q3LI67 103 aa9.09□□□□□ -0.95
RPAP3-207ENST00000551293 SIGMAR1Q99720 223 aa9.08□□□□□ -0.96
RPAP3-207ENST00000551293 SCGB1D1O95968 90 aa9.04□□□□□ -0.96
RPAP3-207ENST00000551293 NOTCH2NLQ7Z3S9 236 aa9.04□□□□□ -0.96
RPAP3-207ENST00000551293 C12orf57Q99622 126 aa9.04□□□□□ -0.96
RPAP3-207ENST00000551293 TEN1Q86WV5 123 aa9.03□□□□□ -0.96
RPAP3-207ENST00000551293 PPDPFLQ8WWR9 84 aa9.03□□□□□ -0.96
RPAP3-207ENST00000551293 LINC00313P59037 77 aa9.02□□□□□ -0.97
RPAP3-207ENST00000551293 NEBP20929 6669 aa8.98□□□□□ -0.97
RPAP3-207ENST00000551293 NDUFV3P56181 108 aaKnown RBP8.97□□□□□ -0.97
RPAP3-207ENST00000551293 BVES-AS1Q5T3Y7 98 aa8.97□□□□□ -0.97
RPAP3-207ENST00000551293 Q8N9P0 234 aaPredicted RBP8.96□□□□□ -0.98
RPAP3-207ENST00000551293 IGKV4-1P06312 121 aa8.95□□□□□ -0.98
RPAP3-207ENST00000551293 DEFB116Q30KQ4 102 aa8.94□□□□□ -0.98
RPAP3-207ENST00000551293 H3BMG7 143 aa8.92□□□□□ -0.98
RPAP3-207ENST00000551293 MTURNQ8N3F0 131 aa8.92□□□□□ -0.98
RPAP3-207ENST00000551293 A0A1W2PNM2 257 aa8.91□□□□□ -0.98
RPAP3-207ENST00000551293 IGHV6-1A0A0B4J1U7 121 aa8.89□□□□□ -0.99
RPAP3-207ENST00000551293 FAM218AQ96MZ4 157 aa8.89□□□□□ -0.99
RPAP3-207ENST00000551293 A0A1B0GV72 72 aa8.86□□□□□ -0.99
RPAP3-207ENST00000551293 A8MWP4 228 aa8.86□□□□□ -0.99
RPAP3-207ENST00000551293 FABP2P12104 132 aa8.86□□□□□ -0.99
RPAP3-207ENST00000551293 COA6Q5JTJ3 125 aaKnown RBP8.86□□□□□ -0.99
RPAP3-207ENST00000551293 HIST1H4GQ99525 98 aa8.84□□□□□ -0.99
RPAP3-207ENST00000551293 SPINK7P58062 85 aa8.83□□□□□ -1
RPAP3-207ENST00000551293 SNRPEP62304 92 aaKnown RBP8.83□□□□□ -1
RPAP3-207ENST00000551293 SNCGO76070 127 aa8.82□□□□□ -1
RPAP3-207ENST00000551293 MUC12Q9UKN1 5478 aa8.81□□□□□ -1
RPAP3-207ENST00000551293 HSBP1L1C9JCN9 74 aa8.78□□□□□ -1
RPAP3-207ENST00000551293 ZCCHC13Q8WW36 166 aaKnown RBP8.78□□□□□ -1
RPAP3-207ENST00000551293 LINC00472Q9H8W2 130 aa8.78□□□□□ -1
RPAP3-207ENST00000551293 H0YGX0 51 aa8.77□□□□□ -1.01
RPAP3-207ENST00000551293 RAB37Q96AX2 223 aa8.77□□□□□ -1.01
RPAP3-207ENST00000551293 WFDC13Q8IUB5 93 aa8.76□□□□□ -1.01
RPAP3-207ENST00000551293 ANKRD29Q8N6D5 301 aa8.76□□□□□ -1.01
RPAP3-207ENST00000551293 TRBV7-4A0A0J9YYF1 115 aa8.74□□□□□ -1.01
RPAP3-207ENST00000551293 KRTAP20-1Q3LI63 56 aa8.73□□□□□ -1.01
RPAP3-207ENST00000551293 A0A1B0GVX0 72 aa8.7□□□□□ -1.02
RPAP3-207ENST00000551293 C8orf87E5RJ46 101 aa8.69□□□□□ -1.02
RPAP3-207ENST00000551293 TRACP01848 142 aa8.68□□□□□ -1.02
RPAP3-207ENST00000551293 CCKP06307 115 aa8.68□□□□□ -1.02
RPAP3-207ENST00000551293 GHRHP01286 108 aa8.67□□□□□ -1.02
RPAP3-207ENST00000551293 HIST1H2BLQ99880 126 aa8.65□□□□□ -1.02
RPAP3-207ENST00000551293 A0A0B4J2C4 111 aa8.64□□□□□ -1.03
RPAP3-207ENST00000551293 A0A1B0GX51 115 aa8.64□□□□□ -1.03
RPAP3-207ENST00000551293 VPS25Q9BRG1 176 aa8.64□□□□□ -1.03
RPAP3-207ENST00000551293 LYRM7Q5U5X0 104 aa8.63□□□□□ -1.03
RPAP3-207ENST00000551293 HIST3H2BBQ8N257 126 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms