RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 LINC00575Q6W349 94 aa7.08□□□□□ -1.28
NPAS3-209ENST00000551008 C9orf92A6NGG3 77 aa7.07□□□□□ -1.28
NPAS3-209ENST00000551008 HSBP1L1C9JCN9 74 aa7.06□□□□□ -1.28
NPAS3-209ENST00000551008 S100A6P06703 90 aa7.06□□□□□ -1.28
NPAS3-209ENST00000551008 C12orf57Q99622 126 aa7.06□□□□□ -1.28
NPAS3-209ENST00000551008 KRTAP9-6A0A140TA67 174 aa7.05□□□□□ -1.28
NPAS3-209ENST00000551008 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
NPAS3-209ENST00000551008 COX8AP10176 69 aa7.05□□□□□ -1.28
NPAS3-209ENST00000551008 NHP2Q9NX24 153 aaKnown RBP7.05□□□□□ -1.28
NPAS3-209ENST00000551008 SCGB1D1O95968 90 aa7.04□□□□□ -1.28
NPAS3-209ENST00000551008 Q6ZQY7 126 aa7.04□□□□□ -1.28
NPAS3-209ENST00000551008 PCOTHQ58A44 107 aa7.03□□□□□ -1.28
NPAS3-209ENST00000551008 IGLV8-61A0A075B6I0 122 aa7.02□□□□□ -1.29
NPAS3-209ENST00000551008 DLEU1O43261 78 aa7.02□□□□□ -1.29
NPAS3-209ENST00000551008 hADV29S1A0JD25 119 aa7.01□□□□□ -1.29
NPAS3-209ENST00000551008 C2orf91Q6ZV80 131 aa7.01□□□□□ -1.29
NPAS3-209ENST00000551008 HIST1H4GQ99525 98 aa7.01□□□□□ -1.29
NPAS3-209ENST00000551008 KRTAP4-12Q9BQ66 201 aa7.01□□□□□ -1.29
NPAS3-209ENST00000551008 VAMP3Q15836 100 aa7□□□□□ -1.29
NPAS3-209ENST00000551008 LCE3BQ5TA77 95 aa7□□□□□ -1.29
NPAS3-209ENST00000551008 IGFL1Q6UW32 110 aa7□□□□□ -1.29
NPAS3-209ENST00000551008 C14orf144Q96I85 54 aa7□□□□□ -1.29
NPAS3-209ENST00000551008 CFC1BP0CG36 223 aa6.99□□□□□ -1.29
NPAS3-209ENST00000551008 CFC1P0CG37 223 aa6.99□□□□□ -1.29
NPAS3-209ENST00000551008 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.97□□□□□ -1.29
NPAS3-209ENST00000551008 KRTAP19-1Q8IUB9 90 aa6.97□□□□□ -1.29
NPAS3-209ENST00000551008 HIGD1BQ9P298 99 aa6.97□□□□□ -1.29
NPAS3-209ENST00000551008 PAM16Q9Y3D7 125 aa6.97□□□□□ -1.29
NPAS3-209ENST00000551008 TRBV7-7A0A0K0K1E9 115 aa6.96□□□□□ -1.3
NPAS3-209ENST00000551008 F8WEM9 126 aa6.96□□□□□ -1.3
NPAS3-209ENST00000551008 SPATA45Q537H7 98 aa6.96□□□□□ -1.3
NPAS3-209ENST00000551008 OCIAD2Q56VL3 154 aa6.96□□□□□ -1.3
NPAS3-209ENST00000551008 CLEC2BQ92478 149 aa6.96□□□□□ -1.3
NPAS3-209ENST00000551008 FAM218AQ96MZ4 157 aa6.96□□□□□ -1.3
NPAS3-209ENST00000551008 RPL37P61927 97 aaKnown RBP6.95□□□□□ -1.3
NPAS3-209ENST00000551008 BVES-AS1Q5T3Y7 98 aa6.95□□□□□ -1.3
NPAS3-209ENST00000551008 Q6JHZ5 121 aa6.95□□□□□ -1.3
NPAS3-209ENST00000551008 A0A0B4J2C4 111 aa6.94□□□□□ -1.3
NPAS3-209ENST00000551008 MT1HP80294 61 aa6.94□□□□□ -1.3
NPAS3-209ENST00000551008 H3BUT2 72 aa6.93□□□□□ -1.3
NPAS3-209ENST00000551008 TCL1BO95988 128 aa6.93□□□□□ -1.3
NPAS3-209ENST00000551008 PPDPFLQ8WWR9 84 aa6.93□□□□□ -1.3
NPAS3-209ENST00000551008 VAMP8Q9BV40 100 aa6.92□□□□□ -1.3
NPAS3-209ENST00000551008 FXYD2P54710 66 aa6.9□□□□□ -1.3
NPAS3-209ENST00000551008 FLGP20930 4061 aaPredicted RBP6.9□□□□□ -1.31
NPAS3-209ENST00000551008 CEND1Q8N111 149 aa6.89□□□□□ -1.31
NPAS3-209ENST00000551008 RAB37Q96AX2 223 aa6.89□□□□□ -1.31
NPAS3-209ENST00000551008 SNHG12Q9BXW3 62 aa6.88□□□□□ -1.31
NPAS3-209ENST00000551008 KRTAP19-4Q3LI73 84 aa6.87□□□□□ -1.31
NPAS3-209ENST00000551008 PYY3Q5JQD4 70 aa6.87□□□□□ -1.31
NPAS3-209ENST00000551008 H0YGX0 51 aa6.86□□□□□ -1.31
NPAS3-209ENST00000551008 Q6Q795 121 aa6.86□□□□□ -1.31
NPAS3-209ENST00000551008 TRIAP1O43715 76 aa6.85□□□□□ -1.31
NPAS3-209ENST00000551008 NDUFV3P56181 108 aaKnown RBP6.85□□□□□ -1.31
NPAS3-209ENST00000551008 PRO1854Q9UHT4 67 aa6.85□□□□□ -1.31
NPAS3-209ENST00000551008 OBSCN-AS1Q96MR7 158 aa6.84□□□□□ -1.31
NPAS3-209ENST00000551008 Q96NJ1 140 aa6.84□□□□□ -1.31
NPAS3-209ENST00000551008 A0A1B0GX51 115 aa6.82□□□□□ -1.32
NPAS3-209ENST00000551008 K7ERJ3 54 aa6.81□□□□□ -1.32
NPAS3-209ENST00000551008 LST1O00453 97 aa6.81□□□□□ -1.32
NPAS3-209ENST00000551008 Q75L30 129 aa6.81□□□□□ -1.32
NPAS3-209ENST00000551008 TEN1Q86WV5 123 aa6.81□□□□□ -1.32
NPAS3-209ENST00000551008 A0A1W2PNM2 257 aa6.8□□□□□ -1.32
NPAS3-209ENST00000551008 KRTAP10-6P60371 365 aaPredicted RBP6.8□□□□□ -1.32
NPAS3-209ENST00000551008 A0A087WSZ3 146 aa6.79□□□□□ -1.32
NPAS3-209ENST00000551008 H3BMG7 143 aa6.79□□□□□ -1.32
NPAS3-209ENST00000551008 HSD52Q0P140 79 aa6.79□□□□□ -1.32
NPAS3-209ENST00000551008 FABP2P12104 132 aa6.77□□□□□ -1.33
NPAS3-209ENST00000551008 C20orf166-AS1Q96NR2 134 aa6.77□□□□□ -1.33
NPAS3-209ENST00000551008 SS18L2Q9UHA2 77 aa6.77□□□□□ -1.33
NPAS3-209ENST00000551008 A8MUU9 505 aa6.75□□□□□ -1.33
NPAS3-209ENST00000551008 SNCGO76070 127 aa6.75□□□□□ -1.33
NPAS3-209ENST00000551008 KRTAP9-9Q9BYP9 154 aa6.74□□□□□ -1.33
NPAS3-209ENST00000551008 KRTAP9-4Q9BYQ2 154 aa6.74□□□□□ -1.33
NPAS3-209ENST00000551008 TMA7Q9Y2S6 64 aaKnown RBP6.74□□□□□ -1.33
NPAS3-209ENST00000551008 A0A1B0GV72 72 aa6.73□□□□□ -1.33
NPAS3-209ENST00000551008 DSCR10P59022 87 aa6.72□□□□□ -1.33
NPAS3-209ENST00000551008 KRTAP16-1A8MUX0 517 aa6.71□□□□□ -1.34
NPAS3-209ENST00000551008 COX6B2Q6YFQ2 88 aa6.71□□□□□ -1.34
NPAS3-209ENST00000551008 ATP11AUNQ6ZP68 121 aa6.71□□□□□ -1.34
NPAS3-209ENST00000551008 ORMDL1Q9P0S3 153 aa6.71□□□□□ -1.34
NPAS3-209ENST00000551008 UQCR10Q9UDW1 63 aa6.71□□□□□ -1.34
NPAS3-209ENST00000551008 PSMB2P49721 201 aa6.7□□□□□ -1.34
NPAS3-209ENST00000551008 TRBV7-4A0A0J9YYF1 115 aa6.69□□□□□ -1.34
NPAS3-209ENST00000551008 NOTCH2NLQ7Z3S9 236 aa6.69□□□□□ -1.34
NPAS3-209ENST00000551008 CRCT1Q9UGL9 99 aa6.69□□□□□ -1.34
NPAS3-209ENST00000551008 DNAL4O96015 105 aa6.68□□□□□ -1.34
NPAS3-209ENST00000551008 ANKRD29Q8N6D5 301 aa6.68□□□□□ -1.34
NPAS3-209ENST00000551008 SIGMAR1Q99720 223 aa6.68□□□□□ -1.34
NPAS3-209ENST00000551008 LINC00472Q9H8W2 130 aa6.68□□□□□ -1.34
NPAS3-209ENST00000551008 TMEM256-PLSCR3K7ERE1 68 aa6.66□□□□□ -1.34
NPAS3-209ENST00000551008 M0R2T5 61 aa6.66□□□□□ -1.34
NPAS3-209ENST00000551008 UBE2V1Q13404 147 aa6.66□□□□□ -1.34
NPAS3-209ENST00000551008 TRACP01848 142 aa6.65□□□□□ -1.34
NPAS3-209ENST00000551008 IGKV4-1P06312 121 aa6.65□□□□□ -1.34
NPAS3-209ENST00000551008 DEFB116Q30KQ4 102 aa6.65□□□□□ -1.34
NPAS3-209ENST00000551008 FSIP2Q5CZC0 6907 aa6.65□□□□□ -1.35
NPAS3-209ENST00000551008 H3BQ85 93 aa6.64□□□□□ -1.35
NPAS3-209ENST00000551008 CCKP06307 115 aa6.64□□□□□ -1.35
NPAS3-209ENST00000551008 COX6CP09669 75 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms