RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 SFTA2Q6UW10 78 aa2.67□□□□□ -1.98
SCAF11-214ENST00000550893 Q6ZRX8 168 aa2.67□□□□□ -1.98
SCAF11-214ENST00000550893 CEND1Q8N111 149 aa2.67□□□□□ -1.98
SCAF11-214ENST00000550893 ST20-AS1Q8NBB2 130 aa2.67□□□□□ -1.98
SCAF11-214ENST00000550893 HIGD2AQ9BW72 106 aa2.67□□□□□ -1.98
SCAF11-214ENST00000550893 NDUFC2O95298 119 aa2.66□□□□□ -1.98
SCAF11-214ENST00000550893 MEIG1Q5JSS6 88 aa2.66□□□□□ -1.98
SCAF11-214ENST00000550893 LINC00308Q8TCZ7 52 aa2.66□□□□□ -1.98
SCAF11-214ENST00000550893 PPDPFQ9H3Y8 114 aa2.66□□□□□ -1.98
SCAF11-214ENST00000550893 SPANXB1Q9NS25 103 aaPredicted RBP2.66□□□□□ -1.98
SCAF11-214ENST00000550893 MYMXA0A1B0GTQ4 84 aa2.65□□□□□ -1.99
SCAF11-214ENST00000550893 SPRR1BP22528 89 aa2.65□□□□□ -1.99
SCAF11-214ENST00000550893 DDTP30046 118 aa2.65□□□□□ -1.99
SCAF11-214ENST00000550893 NMUP48645 174 aa2.65□□□□□ -1.99
SCAF11-214ENST00000550893 PCP2Q8IVA1 136 aa2.65□□□□□ -1.99
SCAF11-214ENST00000550893 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
SCAF11-214ENST00000550893 HSPB8Q9UJY1 196 aa2.65□□□□□ -1.99
SCAF11-214ENST00000550893 TIMM17BO60830 172 aa2.64□□□□□ -1.99
SCAF11-214ENST00000550893 ATOH7Q8N100 152 aa2.64□□□□□ -1.99
SCAF11-214ENST00000550893 HIST3H2BBQ8N257 126 aa2.64□□□□□ -1.99
SCAF11-214ENST00000550893 TRAV23DV6A0A075B6W5 121 aa2.63□□□□□ -1.99
SCAF11-214ENST00000550893 A0A0G2JQZ4 141 aa2.63□□□□□ -1.99
SCAF11-214ENST00000550893 ZNF73O43830 326 aaPredicted RBP2.63□□□□□ -1.99
SCAF11-214ENST00000550893 ELOF1P60002 83 aaKnown RBP2.63□□□□□ -1.99
SCAF11-214ENST00000550893 CTAG1AP78358 180 aa2.63□□□□□ -1.99
SCAF11-214ENST00000550893 MOBPQ13875 183 aa2.63□□□□□ -1.99
SCAF11-214ENST00000550893 LINC00518Q8N0U6 118 aa2.63□□□□□ -1.99
SCAF11-214ENST00000550893 HIST1H2BLQ99880 126 aa2.63□□□□□ -1.99
SCAF11-214ENST00000550893 SPANXDQ9BXN6 97 aa2.63□□□□□ -1.99
SCAF11-214ENST00000550893 MAP1LC3CQ9BXW4 147 aa2.63□□□□□ -1.99
SCAF11-214ENST00000550893 SPANXCQ9NY87 97 aa2.63□□□□□ -1.99
SCAF11-214ENST00000550893 ETDCA0A1B0GVM5 59 aa2.62□□□□□ -1.99
SCAF11-214ENST00000550893 ZNF815PA8K554 130 aa2.62□□□□□ -1.99
SCAF11-214ENST00000550893 LGALS3P17931 250 aaKnown RBP2.62□□□□□ -1.99
SCAF11-214ENST00000550893 RPS29P62273 56 aaKnown RBP2.62□□□□□ -1.99
SCAF11-214ENST00000550893 ASB16-AS1Q495Z4 193 aa2.62□□□□□ -1.99
SCAF11-214ENST00000550893 IGLV8-61A0A075B6I0 122 aa2.61□□□□□ -1.99
SCAF11-214ENST00000550893 IGLV5-48A0A075B6I7 105 aa2.61□□□□□ -1.99
SCAF11-214ENST00000550893 ATP6V1G1O75348 118 aa2.61□□□□□ -1.99
SCAF11-214ENST00000550893 HERVK_113P61574 105 aa2.61□□□□□ -1.99
SCAF11-214ENST00000550893 FP248Q71RG6 208 aaPredicted RBP2.61□□□□□ -1.99
SCAF11-214ENST00000550893 KRTDAPP60985 99 aa2.6□□□□□ -1.99
SCAF11-214ENST00000550893 C6orf99Q4VX62 202 aa2.6□□□□□ -1.99
SCAF11-214ENST00000550893 LINC00587B1AMM8 73 aa2.59□□□□□ -1.99
SCAF11-214ENST00000550893 SPINK1P00995 79 aa2.59□□□□□ -1.99
SCAF11-214ENST00000550893 SPAG11AQ6PDA7 123 aa2.59□□□□□ -1.99
SCAF11-214ENST00000550893 C2orf91Q6ZV80 131 aa2.59□□□□□ -1.99
SCAF11-214ENST00000550893 MUSTN1Q8IVN3 82 aa2.59□□□□□ -1.99
SCAF11-214ENST00000550893 ZNF706Q9Y5V0 76 aaPredicted RBP2.59□□□□□ -1.99
SCAF11-214ENST00000550893 SSBP3-AS1Q7Z2R9 100 aa2.58□□□□□ -2
SCAF11-214ENST00000550893 SMIM11BQ8TCY0 68 aa2.58□□□□□ -2
SCAF11-214ENST00000550893 TRBV7-6A0A0J9YX20 115 aa2.57□□□□□ -2
SCAF11-214ENST00000550893 MT1HP80294 61 aa2.57□□□□□ -2
SCAF11-214ENST00000550893 S100A7L2Q5SY68 101 aa2.57□□□□□ -2
SCAF11-214ENST00000550893 Q5XG85 94 aa2.57□□□□□ -2
SCAF11-214ENST00000550893 PP632Q6XCG6 107 aa2.57□□□□□ -2
SCAF11-214ENST00000550893 A0A1B0GWB2 263 aa2.56□□□□□ -2
SCAF11-214ENST00000550893 COX7BP24311 80 aa2.56□□□□□ -2
SCAF11-214ENST00000550893 C1orf195Q5TG92 126 aa2.56□□□□□ -2
SCAF11-214ENST00000550893 MIEN1Q9BRT3 115 aa2.56□□□□□ -2
SCAF11-214ENST00000550893 IFITM1P13164 125 aa2.55□□□□□ -2
SCAF11-214ENST00000550893 C9orf153Q5TBE3 101 aa2.55□□□□□ -2
SCAF11-214ENST00000550893 H7C2G1 150 aa2.54□□□□□ -2
SCAF11-214ENST00000550893 SLC25A20O43772 301 aa2.54□□□□□ -2
SCAF11-214ENST00000550893 CD164Q04900 197 aa2.54□□□□□ -2
SCAF11-214ENST00000550893 JOSD1Q15040 202 aaPredicted RBP2.54□□□□□ -2
SCAF11-214ENST00000550893 HRCT1Q6UXD1 115 aa2.54□□□□□ -2
SCAF11-214ENST00000550893 LINC00575Q6W349 94 aa2.54□□□□□ -2
SCAF11-214ENST00000550893 Q8N9L7 120 aa2.54□□□□□ -2
SCAF11-214ENST00000550893 OR13C6PQ8NH95 151 aa2.54□□□□□ -2
SCAF11-214ENST00000550893 C12orf57Q99622 126 aa2.54□□□□□ -2
SCAF11-214ENST00000550893 USH2AO75445 5202 aa2.54□□□□□ -2
SCAF11-214ENST00000550893 FSIP2Q5CZC0 6907 aa2.53□□□□□ -2
SCAF11-214ENST00000550893 C9orf92A6NGG3 77 aa2.53□□□□□ -2
SCAF11-214ENST00000550893 DLEU1O43261 78 aa2.53□□□□□ -2
SCAF11-214ENST00000550893 COX8AP10176 69 aa2.53□□□□□ -2
SCAF11-214ENST00000550893 PCOTHQ58A44 107 aa2.53□□□□□ -2
SCAF11-214ENST00000550893 IGFL1Q6UW32 110 aa2.53□□□□□ -2
SCAF11-214ENST00000550893 SCGB1D4Q6XE38 83 aa2.53□□□□□ -2
SCAF11-214ENST00000550893 Q96NJ1 140 aa2.53□□□□□ -2
SCAF11-214ENST00000550893 SSPOA2VEC9 5147 aa2.52□□□□□ -2.01
SCAF11-214ENST00000550893 TEX49A0A1B0GTD5 131 aa2.52□□□□□ -2.01
SCAF11-214ENST00000550893 C20orf202A1L168 122 aa2.52□□□□□ -2.01
SCAF11-214ENST00000550893 FXYD2P54710 66 aa2.52□□□□□ -2.01
SCAF11-214ENST00000550893 Q6ZQY7 126 aa2.52□□□□□ -2.01
SCAF11-214ENST00000550893 A6NDN8 102 aa2.51□□□□□ -2.01
SCAF11-214ENST00000550893 S100A1P23297 94 aa2.51□□□□□ -2.01
SCAF11-214ENST00000550893 RPL37P61927 97 aaKnown RBP2.51□□□□□ -2.01
SCAF11-214ENST00000550893 PYY3Q5JQD4 70 aa2.51□□□□□ -2.01
SCAF11-214ENST00000550893 DEFB105AQ8NG35 78 aa2.51□□□□□ -2.01
SCAF11-214ENST00000550893 C14orf144Q96I85 54 aa2.51□□□□□ -2.01
SCAF11-214ENST00000550893 TRAV13-2A0A0B4J235 113 aa2.5□□□□□ -2.01
SCAF11-214ENST00000550893 TRBV7-7A0A0K0K1E9 115 aa2.5□□□□□ -2.01
SCAF11-214ENST00000550893 H3BUT2 72 aa2.5□□□□□ -2.01
SCAF11-214ENST00000550893 PRO1933Q9H354 126 aa2.5□□□□□ -2.01
SCAF11-214ENST00000550893 HIGD1BQ9P298 99 aa2.5□□□□□ -2.01
SCAF11-214ENST00000550893 LAMTOR3Q9UHA4 124 aa2.5□□□□□ -2.01
SCAF11-214ENST00000550893 A0A0B4J2C4 111 aa2.49□□□□□ -2.01
SCAF11-214ENST00000550893 S100A12P80511 92 aa2.49□□□□□ -2.01
SCAF11-214ENST00000550893 SPATA45Q537H7 98 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms