RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 Q6JHZ5 121 aa5.91□□□□□ -1.46
VTI1BP3-201ENST00000550220 LINC00575Q6W349 94 aa5.91□□□□□ -1.46
VTI1BP3-201ENST00000550220 HIST3H2BBQ8N257 126 aa5.91□□□□□ -1.46
VTI1BP3-201ENST00000550220 HIST1H2BLQ99880 126 aa5.91□□□□□ -1.46
VTI1BP3-201ENST00000550220 hADV29S1A0JD25 119 aa5.9□□□□□ -1.46
VTI1BP3-201ENST00000550220 S100A6P06703 90 aa5.9□□□□□ -1.46
VTI1BP3-201ENST00000550220 PPDPFLQ8WWR9 84 aa5.89□□□□□ -1.47
VTI1BP3-201ENST00000550220 BVES-AS1Q5T3Y7 98 aa5.88□□□□□ -1.47
VTI1BP3-201ENST00000550220 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.88□□□□□ -1.47
VTI1BP3-201ENST00000550220 SNCGO76070 127 aa5.87□□□□□ -1.47
VTI1BP3-201ENST00000550220 Q6ZQY7 126 aa5.87□□□□□ -1.47
VTI1BP3-201ENST00000550220 A0A0G2JQZ4 141 aa5.86□□□□□ -1.47
VTI1BP3-201ENST00000550220 SCGB1D1O95968 90 aa5.86□□□□□ -1.47
VTI1BP3-201ENST00000550220 OCIAD2Q56VL3 154 aa5.86□□□□□ -1.47
VTI1BP3-201ENST00000550220 CLEC2BQ92478 149 aa5.86□□□□□ -1.47
VTI1BP3-201ENST00000550220 HIST1H4GQ99525 98 aa5.86□□□□□ -1.47
VTI1BP3-201ENST00000550220 KRTAP9-6A0A140TA67 174 aa5.85□□□□□ -1.47
VTI1BP3-201ENST00000550220 CFC1BP0CG36 223 aa5.85□□□□□ -1.47
VTI1BP3-201ENST00000550220 RPL37P61927 97 aaKnown RBP5.85□□□□□ -1.47
VTI1BP3-201ENST00000550220 SNHG12Q9BXW3 62 aa5.85□□□□□ -1.47
VTI1BP3-201ENST00000550220 TRBV7-7A0A0K0K1E9 115 aa5.84□□□□□ -1.47
VTI1BP3-201ENST00000550220 DLEU1O43261 78 aa5.83□□□□□ -1.48
VTI1BP3-201ENST00000550220 COX8AP10176 69 aa5.83□□□□□ -1.48
VTI1BP3-201ENST00000550220 IGFL1Q6UW32 110 aa5.82□□□□□ -1.48
VTI1BP3-201ENST00000550220 C12orf57Q99622 126 aa5.82□□□□□ -1.48
VTI1BP3-201ENST00000550220 H0YGX0 51 aa5.81□□□□□ -1.48
VTI1BP3-201ENST00000550220 KRTAP19-2Q3LHN2 52 aa5.81□□□□□ -1.48
VTI1BP3-201ENST00000550220 MT1HP80294 61 aa5.8□□□□□ -1.48
VTI1BP3-201ENST00000550220 RAB37Q96AX2 223 aa5.8□□□□□ -1.48
VTI1BP3-201ENST00000550220 LST1O00453 97 aa5.79□□□□□ -1.48
VTI1BP3-201ENST00000550220 HIGD1BQ9P298 99 aa5.79□□□□□ -1.48
VTI1BP3-201ENST00000550220 SS18L2Q9UHA2 77 aa5.79□□□□□ -1.48
VTI1BP3-201ENST00000550220 Q6Q795 121 aa5.78□□□□□ -1.48
VTI1BP3-201ENST00000550220 COX6B2Q6YFQ2 88 aa5.78□□□□□ -1.48
VTI1BP3-201ENST00000550220 ATP11AUNQ6ZP68 121 aa5.78□□□□□ -1.48
VTI1BP3-201ENST00000550220 A0A0B4J2C4 111 aa5.77□□□□□ -1.49
VTI1BP3-201ENST00000550220 CFC1P0CG37 223 aa5.77□□□□□ -1.49
VTI1BP3-201ENST00000550220 A0A1B0GX51 115 aa5.76□□□□□ -1.49
VTI1BP3-201ENST00000550220 Q75L30 129 aa5.76□□□□□ -1.49
VTI1BP3-201ENST00000550220 H3BUT2 72 aa5.75□□□□□ -1.49
VTI1BP3-201ENST00000550220 M0R2T5 61 aa5.75□□□□□ -1.49
VTI1BP3-201ENST00000550220 NDUFV3P56181 108 aaKnown RBP5.75□□□□□ -1.49
VTI1BP3-201ENST00000550220 TEN1Q86WV5 123 aa5.75□□□□□ -1.49
VTI1BP3-201ENST00000550220 C14orf144Q96I85 54 aa5.75□□□□□ -1.49
VTI1BP3-201ENST00000550220 OBSCN-AS1Q96MR7 158 aa5.75□□□□□ -1.49
VTI1BP3-201ENST00000550220 FSIP2Q5CZC0 6907 aa5.74□□□□□ -1.49
VTI1BP3-201ENST00000550220 SPATA45Q537H7 98 aa5.73□□□□□ -1.49
VTI1BP3-201ENST00000550220 VAMP8Q9BV40 100 aa5.73□□□□□ -1.49
VTI1BP3-201ENST00000550220 PRO1854Q9UHT4 67 aa5.73□□□□□ -1.49
VTI1BP3-201ENST00000550220 PAM16Q9Y3D7 125 aa5.73□□□□□ -1.49
VTI1BP3-201ENST00000550220 H3BQ85 93 aa5.72□□□□□ -1.49
VTI1BP3-201ENST00000550220 CEND1Q8N111 149 aa5.72□□□□□ -1.49
VTI1BP3-201ENST00000550220 H3BMG7 143 aa5.71□□□□□ -1.5
VTI1BP3-201ENST00000550220 Q96NJ1 140 aa5.71□□□□□ -1.5
VTI1BP3-201ENST00000550220 FABP2P12104 132 aa5.7□□□□□ -1.5
VTI1BP3-201ENST00000550220 KRTAP10-6P60371 365 aaPredicted RBP5.7□□□□□ -1.5
VTI1BP3-201ENST00000550220 CRCT1Q9UGL9 99 aa5.7□□□□□ -1.5
VTI1BP3-201ENST00000550220 C2orf91Q6ZV80 131 aa5.69□□□□□ -1.5
VTI1BP3-201ENST00000550220 FAM218AQ96MZ4 157 aa5.69□□□□□ -1.5
VTI1BP3-201ENST00000550220 A0A087WSZ3 146 aa5.68□□□□□ -1.5
VTI1BP3-201ENST00000550220 C20orf166-AS1Q96NR2 134 aa5.68□□□□□ -1.5
VTI1BP3-201ENST00000550220 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
VTI1BP3-201ENST00000550220 DNAL4O96015 105 aa5.67□□□□□ -1.5
VTI1BP3-201ENST00000550220 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
VTI1BP3-201ENST00000550220 FLGP20930 4061 aaPredicted RBP5.67□□□□□ -1.5
VTI1BP3-201ENST00000550220 A8MUU9 505 aa5.66□□□□□ -1.5
VTI1BP3-201ENST00000550220 COX6CP09669 75 aa5.66□□□□□ -1.5
VTI1BP3-201ENST00000550220 TRBV20-1A0A075B6N2 111 aa5.65□□□□□ -1.5
VTI1BP3-201ENST00000550220 TMEM256-PLSCR3K7ERE1 68 aa5.65□□□□□ -1.5
VTI1BP3-201ENST00000550220 ANKRD29Q8N6D5 301 aa5.65□□□□□ -1.5
VTI1BP3-201ENST00000550220 ORMDL1Q9P0S3 153 aa5.65□□□□□ -1.5
VTI1BP3-201ENST00000550220 TRBV7-4A0A0J9YYF1 115 aa5.64□□□□□ -1.51
VTI1BP3-201ENST00000550220 TRIAP1O43715 76 aa5.64□□□□□ -1.51
VTI1BP3-201ENST00000550220 FXYD2P54710 66 aa5.64□□□□□ -1.51
VTI1BP3-201ENST00000550220 PSMB2P49721 201 aa5.63□□□□□ -1.51
VTI1BP3-201ENST00000550220 HSD52Q0P140 79 aa5.63□□□□□ -1.51
VTI1BP3-201ENST00000550220 TMA7Q9Y2S6 64 aaKnown RBP5.63□□□□□ -1.51
VTI1BP3-201ENST00000550220 A0A1W2PNM2 257 aa5.62□□□□□ -1.51
VTI1BP3-201ENST00000550220 LINC00313P59037 77 aa5.62□□□□□ -1.51
VTI1BP3-201ENST00000550220 SIGMAR1Q99720 223 aa5.62□□□□□ -1.51
VTI1BP3-201ENST00000550220 IGKV4-1P06312 121 aa5.6□□□□□ -1.51
VTI1BP3-201ENST00000550220 DSCR10P59022 87 aa5.59□□□□□ -1.51
VTI1BP3-201ENST00000550220 UBE2V1Q13404 147 aa5.59□□□□□ -1.51
VTI1BP3-201ENST00000550220 TRACP01848 142 aa5.58□□□□□ -1.52
VTI1BP3-201ENST00000550220 C21orf62-AS1Q17RA5 79 aa5.58□□□□□ -1.52
VTI1BP3-201ENST00000550220 CCKP06307 115 aa5.57□□□□□ -1.52
VTI1BP3-201ENST00000550220 UQCR10Q9UDW1 63 aa5.57□□□□□ -1.52
VTI1BP3-201ENST00000550220 PYY3Q5JQD4 70 aa5.56□□□□□ -1.52
VTI1BP3-201ENST00000550220 LINC00472Q9H8W2 130 aa5.56□□□□□ -1.52
VTI1BP3-201ENST00000550220 K7ERJ3 54 aa5.55□□□□□ -1.52
VTI1BP3-201ENST00000550220 SCGB1C2P0DMR2 95 aa5.55□□□□□ -1.52
VTI1BP3-201ENST00000550220 RBM3P98179 157 aaKnown RBP5.55□□□□□ -1.52
VTI1BP3-201ENST00000550220 DSCR8Q96T75 97 aa5.55□□□□□ -1.52
VTI1BP3-201ENST00000550220 A0A1B0GV72 72 aa5.53□□□□□ -1.52
VTI1BP3-201ENST00000550220 KRTAP16-1A8MUX0 517 aa5.53□□□□□ -1.52
VTI1BP3-201ENST00000550220 RBM12B-AS1Q9P1G2 102 aa5.53□□□□□ -1.52
VTI1BP3-201ENST00000550220 IGHV6-1A0A0B4J1U7 121 aa5.52□□□□□ -1.53
VTI1BP3-201ENST00000550220 FAM236DA0A1B0GTK5 79 aa5.52□□□□□ -1.53
VTI1BP3-201ENST00000550220 C8orf87E5RJ46 101 aa5.52□□□□□ -1.53
VTI1BP3-201ENST00000550220 FAM236CP0DP71 79 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms