RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 LRCOL1A6NCL2 159 aa9.1□□□□□ -0.95
LETMD1-209ENST00000547318 H3BPC8 53 aa9.09□□□□□ -0.95
LETMD1-209ENST00000547318 PHF5AQ7RTV0 110 aaKnown RBP9.09□□□□□ -0.95
LETMD1-209ENST00000547318 NBDYA0A0U1RRE5 68 aa9.09□□□□□ -0.95
LETMD1-209ENST00000547318 FP248Q71RG6 208 aaPredicted RBP9.08□□□□□ -0.96
LETMD1-209ENST00000547318 FBN1P35555 2871 aaKnown RBP9.08□□□□□ -0.96
LETMD1-209ENST00000547318 RPL37AP61513 92 aaKnown RBP9.07□□□□□ -0.96
LETMD1-209ENST00000547318 BAHCC1Q9P281 2608 aa9.07□□□□□ -0.96
LETMD1-209ENST00000547318 MP68P56378 58 aa9.07□□□□□ -0.96
LETMD1-209ENST00000547318 ANK2Q01484 3957 aa9.06□□□□□ -0.96
LETMD1-209ENST00000547318 A8MWP4 228 aa9.05□□□□□ -0.96
LETMD1-209ENST00000547318 KRTAP29-1A8MX34 341 aaPredicted RBP9.05□□□□□ -0.96
LETMD1-209ENST00000547318 KRTAP13-1Q8IUC0 172 aa9.05□□□□□ -0.96
LETMD1-209ENST00000547318 PRR15Q8IV56 129 aa9.05□□□□□ -0.96
LETMD1-209ENST00000547318 CHTF8P0CG12 524 aa9.04□□□□□ -0.96
LETMD1-209ENST00000547318 CYP4F30PQ9H0H9 118 aa9.04□□□□□ -0.96
LETMD1-209ENST00000547318 STAB1Q9NY15 2570 aa9.04□□□□□ -0.96
LETMD1-209ENST00000547318 Q6ZRN7 208 aaPredicted RBP9.04□□□□□ -0.96
LETMD1-209ENST00000547318 LINC00472Q9H8W2 130 aa9.04□□□□□ -0.96
LETMD1-209ENST00000547318 FLNBO75369 2602 aaKnown RBP9.03□□□□□ -0.96
LETMD1-209ENST00000547318 HUWE1Q7Z6Z7 4374 aaKnown RBP9.02□□□□□ -0.97
LETMD1-209ENST00000547318 KRTAP11-1Q8IUC1 163 aa9.02□□□□□ -0.97
LETMD1-209ENST00000547318 CASC2Q6XLA1 102 aa9.01□□□□□ -0.97
LETMD1-209ENST00000547318 hDV103S1A0JD37 113 aa9□□□□□ -0.97
LETMD1-209ENST00000547318 ZNF706Q9Y5V0 76 aaPredicted RBP9□□□□□ -0.97
LETMD1-209ENST00000547318 A0A0G2JQZ4 141 aa9□□□□□ -0.97
LETMD1-209ENST00000547318 SPACA4Q8TDM5 124 aa9□□□□□ -0.97
LETMD1-209ENST00000547318 MDFIQ99750 246 aa9□□□□□ -0.97
LETMD1-209ENST00000547318 WFDC13Q8IUB5 93 aa8.99□□□□□ -0.97
LETMD1-209ENST00000547318 LINC00483Q53H64 154 aa8.98□□□□□ -0.97
LETMD1-209ENST00000547318 PRO0628Q9UI54 55 aa8.98□□□□□ -0.97
LETMD1-209ENST00000547318 SPANXA2-OT1Q8N9U9 137 aa8.97□□□□□ -0.97
LETMD1-209ENST00000547318 TRAV22A0A0B4J277 110 aa8.97□□□□□ -0.97
LETMD1-209ENST00000547318 DEFB116Q30KQ4 102 aa8.97□□□□□ -0.97
LETMD1-209ENST00000547318 FAM229BQ4G0N7 80 aa8.94□□□□□ -0.98
LETMD1-209ENST00000547318 C1orf64Q8NEQ6 169 aa8.93□□□□□ -0.98
LETMD1-209ENST00000547318 H0Y9P7 68 aa8.93□□□□□ -0.98
LETMD1-209ENST00000547318 MOBPQ13875 183 aa8.92□□□□□ -0.98
LETMD1-209ENST00000547318 Q1T7F1 81 aa8.92□□□□□ -0.98
LETMD1-209ENST00000547318 NOTCH1P46531 2555 aa8.92□□□□□ -0.98
LETMD1-209ENST00000547318 TP53AIP1Q9HCN2 124 aa8.92□□□□□ -0.98
LETMD1-209ENST00000547318 A0A087WTM6 91 aa8.91□□□□□ -0.98
LETMD1-209ENST00000547318 LINC00336Q6ZUF6 198 aa8.91□□□□□ -0.98
LETMD1-209ENST00000547318 LINC00208Q96KT6 92 aa8.91□□□□□ -0.98
LETMD1-209ENST00000547318 MMP24-AS1A0A0U1RRL7 71 aa8.9□□□□□ -0.98
LETMD1-209ENST00000547318 PANO1I0J062 215 aa8.9□□□□□ -0.99
LETMD1-209ENST00000547318 V9GYY9 64 aa8.9□□□□□ -0.99
LETMD1-209ENST00000547318 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.89□□□□□ -0.99
LETMD1-209ENST00000547318 ASB16-AS1Q495Z4 193 aa8.88□□□□□ -0.99
LETMD1-209ENST00000547318 PLAC8Q9NZF1 115 aa8.88□□□□□ -0.99
LETMD1-209ENST00000547318 MPLKIPQ8TAP9 179 aa8.87□□□□□ -0.99
LETMD1-209ENST00000547318 DYNC2H1Q8NCM8 4307 aaKnown RBP8.87□□□□□ -0.99
LETMD1-209ENST00000547318 IGLV5-52A0A0A0MRZ9 124 aa8.87□□□□□ -0.99
LETMD1-209ENST00000547318 Q96NJ1 140 aa8.86□□□□□ -0.99
LETMD1-209ENST00000547318 NBEAL1Q6ZS30 2694 aa8.85□□□□□ -0.99
LETMD1-209ENST00000547318 RTL8CO15255 209 aa8.85□□□□□ -0.99
LETMD1-209ENST00000547318 IGLV9-49A0A0B4J1Y8 123 aa8.84□□□□□ -0.99
LETMD1-209ENST00000547318 WWC2-AS2Q96NR7 200 aa8.84□□□□□ -0.99
LETMD1-209ENST00000547318 ZNF861PO60384 105 aa8.83□□□□□ -1
LETMD1-209ENST00000547318 Q6ZR54 194 aa8.83□□□□□ -1
LETMD1-209ENST00000547318 COL6A5A8TX70 2615 aa8.83□□□□□ -1
LETMD1-209ENST00000547318 CDK2AP2O75956 126 aa8.81□□□□□ -1
LETMD1-209ENST00000547318 C8orf17Q9NRJ1 99 aa8.81□□□□□ -1
LETMD1-209ENST00000547318 PSORS1C2Q9UIG4 136 aa8.81□□□□□ -1
LETMD1-209ENST00000547318 A0A1B0GVX0 72 aa8.8□□□□□ -1
LETMD1-209ENST00000547318 C1orf195Q5TG92 126 aa8.8□□□□□ -1
LETMD1-209ENST00000547318 BRK1Q8WUW1 75 aa8.78□□□□□ -1
LETMD1-209ENST00000547318 DNAH9Q9NYC9 4486 aa8.78□□□□□ -1
LETMD1-209ENST00000547318 IGLV7-46A0A075B6I9 117 aa8.77□□□□□ -1.01
LETMD1-209ENST00000547318 CD164Q04900 197 aa8.77□□□□□ -1.01
LETMD1-209ENST00000547318 STAB2Q8WWQ8 2551 aa8.76□□□□□ -1.01
LETMD1-209ENST00000547318 DNAH10Q8IVF4 4471 aa8.75□□□□□ -1.01
LETMD1-209ENST00000547318 PRR4Q16378 134 aa8.75□□□□□ -1.01
LETMD1-209ENST00000547318 C1orf134Q5TEV5 83 aa8.74□□□□□ -1.01
LETMD1-209ENST00000547318 MRPL34Q9BQ48 92 aaKnown RBP8.74□□□□□ -1.01
LETMD1-209ENST00000547318 LIMD2Q9BT23 127 aa8.74□□□□□ -1.01
LETMD1-209ENST00000547318 MGAM2Q2M2H8 2515 aa8.72□□□□□ -1.01
LETMD1-209ENST00000547318 COL7A1Q02388 2944 aa8.72□□□□□ -1.01
LETMD1-209ENST00000547318 IGLV7-43P04211 117 aa8.71□□□□□ -1.01
LETMD1-209ENST00000547318 IGHV6-1A0A0B4J1U7 121 aa8.7□□□□□ -1.02
LETMD1-209ENST00000547318 SSBP3-AS1Q7Z2R9 100 aa8.7□□□□□ -1.02
LETMD1-209ENST00000547318 C8orf87E5RJ46 101 aa8.68□□□□□ -1.02
LETMD1-209ENST00000547318 NDUFS5O43920 106 aa8.66□□□□□ -1.02
LETMD1-209ENST00000547318 LOC101927531A0A1B0GV80 90 aa8.66□□□□□ -1.02
LETMD1-209ENST00000547318 COA5Q86WW8 74 aa8.65□□□□□ -1.02
LETMD1-209ENST00000547318 Q8N9P0 234 aaPredicted RBP8.65□□□□□ -1.02
LETMD1-209ENST00000547318 LYSTQ99698 3801 aa8.63□□□□□ -1.03
LETMD1-209ENST00000547318 PSPHP1O15172 72 aa8.63□□□□□ -1.03
LETMD1-209ENST00000547318 VPS13DQ5THJ4 4388 aa8.62□□□□□ -1.03
LETMD1-209ENST00000547318 PLECQ15149 4684 aaKnown RBP8.6□□□□□ -1.03
LETMD1-209ENST00000547318 CSMD3Q7Z407 3707 aa8.59□□□□□ -1.03
LETMD1-209ENST00000547318 A8MUN3 132 aa8.59□□□□□ -1.03
LETMD1-209ENST00000547318 PCOTHQ58A44 107 aa8.59□□□□□ -1.03
LETMD1-209ENST00000547318 Q5VV11 94 aa8.59□□□□□ -1.03
LETMD1-209ENST00000547318 ANAPC11Q9NYG5 84 aa8.59□□□□□ -1.03
LETMD1-209ENST00000547318 DNAH7Q8WXX0 4024 aa8.57□□□□□ -1.04
LETMD1-209ENST00000547318 CIRBP-AS1Q8TBR5 109 aa8.57□□□□□ -1.04
LETMD1-209ENST00000547318 Q75L30 129 aa8.56□□□□□ -1.04
LETMD1-209ENST00000547318 LY6G6CO95867 125 aa8.55□□□□□ -1.04
LETMD1-209ENST00000547318 KRTAP13-3Q3SY46 172 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms