RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 MGAM2Q2M2H8 2515 aa9.54□□□□□ -0.88
CNN3-207ENST00000545882 DEFB116Q30KQ4 102 aa9.54□□□□□ -0.88
CNN3-207ENST00000545882 HCG22E2RYF7 251 aa9.53□□□□□ -0.88
CNN3-207ENST00000545882 COL7A1Q02388 2944 aa9.53□□□□□ -0.88
CNN3-207ENST00000545882 CHTF8P0CG12 524 aa9.52□□□□□ -0.88
CNN3-207ENST00000545882 LYSTQ99698 3801 aa9.52□□□□□ -0.88
CNN3-207ENST00000545882 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.52□□□□□ -0.89
CNN3-207ENST00000545882 PHF5AQ7RTV0 110 aaKnown RBP9.52□□□□□ -0.89
CNN3-207ENST00000545882 A0A087WSZ3 146 aa9.51□□□□□ -0.89
CNN3-207ENST00000545882 LINC00336Q6ZUF6 198 aa9.5□□□□□ -0.89
CNN3-207ENST00000545882 APLNQ9ULZ1 77 aa9.5□□□□□ -0.89
CNN3-207ENST00000545882 DYNC2H1Q8NCM8 4307 aaKnown RBP9.5□□□□□ -0.89
CNN3-207ENST00000545882 STAB2Q8WWQ8 2551 aa9.49□□□□□ -0.89
CNN3-207ENST00000545882 UBE2AP49459 152 aa9.48□□□□□ -0.89
CNN3-207ENST00000545882 SPRR1BP22528 89 aa9.48□□□□□ -0.89
CNN3-207ENST00000545882 RPL37AP61513 92 aaKnown RBP9.47□□□□□ -0.89
CNN3-207ENST00000545882 MDFIQ99750 246 aa9.46□□□□□ -0.89
CNN3-207ENST00000545882 H0Y9J4 135 aa9.46□□□□□ -0.9
CNN3-207ENST00000545882 WFDC13Q8IUB5 93 aa9.46□□□□□ -0.9
CNN3-207ENST00000545882 B9D2Q9BPU9 175 aa9.46□□□□□ -0.9
CNN3-207ENST00000545882 UBE2DNLQ8IWF7 75 aa9.45□□□□□ -0.9
CNN3-207ENST00000545882 hDV103S1A0JD37 113 aa9.44□□□□□ -0.9
CNN3-207ENST00000545882 KRTAP29-1A8MX34 341 aaPredicted RBP9.44□□□□□ -0.9
CNN3-207ENST00000545882 SRRM2Q9UQ35 2752 aaKnown RBP9.44□□□□□ -0.9
CNN3-207ENST00000545882 C14orf177Q52M58 125 aa9.43□□□□□ -0.9
CNN3-207ENST00000545882 C9orf163Q8N9P6 203 aa9.43□□□□□ -0.9
CNN3-207ENST00000545882 LRCOL1A6NCL2 159 aa9.43□□□□□ -0.9
CNN3-207ENST00000545882 CSMD3Q7Z407 3707 aa9.42□□□□□ -0.9
CNN3-207ENST00000545882 MPLKIPQ8TAP9 179 aa9.42□□□□□ -0.9
CNN3-207ENST00000545882 PANO1I0J062 215 aa9.41□□□□□ -0.9
CNN3-207ENST00000545882 LINC00472Q9H8W2 130 aa9.41□□□□□ -0.9
CNN3-207ENST00000545882 C1orf64Q8NEQ6 169 aa9.4□□□□□ -0.9
CNN3-207ENST00000545882 DNAH7Q8WXX0 4024 aa9.39□□□□□ -0.91
CNN3-207ENST00000545882 PRO0628Q9UI54 55 aa9.39□□□□□ -0.91
CNN3-207ENST00000545882 KRTAP13-1Q8IUC0 172 aa9.38□□□□□ -0.91
CNN3-207ENST00000545882 PRR15Q8IV56 129 aa9.38□□□□□ -0.91
CNN3-207ENST00000545882 PLECQ15149 4684 aaKnown RBP9.37□□□□□ -0.91
CNN3-207ENST00000545882 Q6ZRN7 208 aaPredicted RBP9.37□□□□□ -0.91
CNN3-207ENST00000545882 CYP4F30PQ9H0H9 118 aa9.37□□□□□ -0.91
CNN3-207ENST00000545882 A8MWP4 228 aa9.35□□□□□ -0.91
CNN3-207ENST00000545882 NBDYA0A0U1RRE5 68 aa9.35□□□□□ -0.91
CNN3-207ENST00000545882 PRR4Q16378 134 aa9.35□□□□□ -0.91
CNN3-207ENST00000545882 CASC2Q6XLA1 102 aa9.35□□□□□ -0.91
CNN3-207ENST00000545882 TRAV22A0A0B4J277 110 aa9.34□□□□□ -0.91
CNN3-207ENST00000545882 TENM2Q9NT68 2774 aa9.34□□□□□ -0.91
CNN3-207ENST00000545882 NUPR2A6NF83 97 aa9.33□□□□□ -0.92
CNN3-207ENST00000545882 MP68P56378 58 aa9.33□□□□□ -0.92
CNN3-207ENST00000545882 LINC00208Q96KT6 92 aa9.33□□□□□ -0.92
CNN3-207ENST00000545882 NDUFB1O75438 58 aa9.31□□□□□ -0.92
CNN3-207ENST00000545882 H0Y9P7 68 aa9.3□□□□□ -0.92
CNN3-207ENST00000545882 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.3□□□□□ -0.92
CNN3-207ENST00000545882 PKIGQ9Y2B9 76 aa9.29□□□□□ -0.92
CNN3-207ENST00000545882 MMP24-AS1A0A0U1RRL7 71 aa9.29□□□□□ -0.92
CNN3-207ENST00000545882 Q1T7F1 81 aa9.29□□□□□ -0.92
CNN3-207ENST00000545882 BRK1Q8WUW1 75 aa9.28□□□□□ -0.92
CNN3-207ENST00000545882 Q96NJ1 140 aa9.28□□□□□ -0.92
CNN3-207ENST00000545882 SPACA4Q8TDM5 124 aa9.27□□□□□ -0.93
CNN3-207ENST00000545882 STARD9Q9P2P6 4700 aa9.27□□□□□ -0.93
CNN3-207ENST00000545882 H3BPC8 53 aa9.26□□□□□ -0.93
CNN3-207ENST00000545882 VPS13DQ5THJ4 4388 aa9.26□□□□□ -0.93
CNN3-207ENST00000545882 PRKDCP78527 4128 aaKnown RBP9.25□□□□□ -0.93
CNN3-207ENST00000545882 IGLV9-49A0A0B4J1Y8 123 aa9.23□□□□□ -0.93
CNN3-207ENST00000545882 LINC00483Q53H64 154 aa9.23□□□□□ -0.93
CNN3-207ENST00000545882 SPANXA2-OT1Q8N9U9 137 aa9.23□□□□□ -0.93
CNN3-207ENST00000545882 ASB16-AS1Q495Z4 193 aa9.21□□□□□ -0.93
CNN3-207ENST00000545882 MOBPQ13875 183 aa9.2□□□□□ -0.94
CNN3-207ENST00000545882 A0A087WTM6 91 aa9.19□□□□□ -0.94
CNN3-207ENST00000545882 WWC2-AS2Q96NR7 200 aa9.17□□□□□ -0.94
CNN3-207ENST00000545882 PSPHP1O15172 72 aa9.16□□□□□ -0.94
CNN3-207ENST00000545882 PSORS1C2Q9UIG4 136 aa9.16□□□□□ -0.94
CNN3-207ENST00000545882 C8orf17Q9NRJ1 99 aa9.15□□□□□ -0.95
CNN3-207ENST00000545882 IGLV5-52A0A0A0MRZ9 124 aa9.14□□□□□ -0.95
CNN3-207ENST00000545882 ANAPC11Q9NYG5 84 aa9.14□□□□□ -0.95
CNN3-207ENST00000545882 DNAH8Q96JB1 4490 aa9.13□□□□□ -0.95
CNN3-207ENST00000545882 RTL8CO15255 209 aa9.13□□□□□ -0.95
CNN3-207ENST00000545882 Q6ZR54 194 aa9.13□□□□□ -0.95
CNN3-207ENST00000545882 HECTD4Q9Y4D8 3996 aa9.13□□□□□ -0.95
CNN3-207ENST00000545882 MEGF8Q7Z7M0 2845 aa9.13□□□□□ -0.95
CNN3-207ENST00000545882 DNAH2Q9P225 4427 aa9.12□□□□□ -0.95
CNN3-207ENST00000545882 ZNF706Q9Y5V0 76 aaPredicted RBP9.11□□□□□ -0.95
CNN3-207ENST00000545882 DNAH17Q9UFH2 4485 aa9.11□□□□□ -0.95
CNN3-207ENST00000545882 A0A1B0GVX0 72 aa9.11□□□□□ -0.95
CNN3-207ENST00000545882 A8MUN3 132 aa9.11□□□□□ -0.95
CNN3-207ENST00000545882 PLAC8Q9NZF1 115 aa9.11□□□□□ -0.95
CNN3-207ENST00000545882 IGLV7-46A0A075B6I9 117 aa9.1□□□□□ -0.95
CNN3-207ENST00000545882 TP53AIP1Q9HCN2 124 aa9.1□□□□□ -0.95
CNN3-207ENST00000545882 KMT2AQ03164 3969 aa9.1□□□□□ -0.95
CNN3-207ENST00000545882 DNHD1Q96M86 4753 aa9.09□□□□□ -0.95
CNN3-207ENST00000545882 IGHV6-1A0A0B4J1U7 121 aa9.09□□□□□ -0.95
CNN3-207ENST00000545882 ZNF861PO60384 105 aa9.09□□□□□ -0.95
CNN3-207ENST00000545882 Q8N9P0 234 aaPredicted RBP9.09□□□□□ -0.95
CNN3-207ENST00000545882 A0A087X002 238 aa9.08□□□□□ -0.96
CNN3-207ENST00000545882 CD164Q04900 197 aa9.08□□□□□ -0.96
CNN3-207ENST00000545882 NOTCH2NLQ7Z3S9 236 aa9.08□□□□□ -0.96
CNN3-207ENST00000545882 V9GYY9 64 aa9.08□□□□□ -0.96
CNN3-207ENST00000545882 PCOTHQ58A44 107 aa9.07□□□□□ -0.96
CNN3-207ENST00000545882 Q5VV11 94 aa9.07□□□□□ -0.96
CNN3-207ENST00000545882 FBN3Q75N90 2809 aa9.06□□□□□ -0.96
CNN3-207ENST00000545882 COA5Q86WW8 74 aa9.05□□□□□ -0.96
CNN3-207ENST00000545882 MRPL34Q9BQ48 92 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms