RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 ST20-AS1Q8NBB2 130 aa12□□□□□ -0.49
MSLN-202ENST00000545450 ETDCA0A1B0GVM5 59 aa11.99□□□□□ -0.49
MSLN-202ENST00000545450 DSCR10P59022 87 aa11.99□□□□□ -0.49
MSLN-202ENST00000545450 FBN3Q75N90 2809 aa11.99□□□□□ -0.49
MSLN-202ENST00000545450 FAM168BA1KXE4 195 aa11.98□□□□□ -0.49
MSLN-202ENST00000545450 ZCCHC13Q8WW36 166 aaKnown RBP11.97□□□□□ -0.49
MSLN-202ENST00000545450 BRK1Q8WUW1 75 aa11.96□□□□□ -0.49
MSLN-202ENST00000545450 KRTAP7-1Q8IUC3 87 aa11.96□□□□□ -0.5
MSLN-202ENST00000545450 hDV103S1A0JD37 113 aa11.95□□□□□ -0.5
MSLN-202ENST00000545450 VPS13DQ5THJ4 4388 aa11.94□□□□□ -0.5
MSLN-202ENST00000545450 K7EQZ3 153 aa11.94□□□□□ -0.5
MSLN-202ENST00000545450 MRPL55Q7Z7F7 128 aaKnown RBP11.89□□□□□ -0.51
MSLN-202ENST00000545450 PKIGQ9Y2B9 76 aa11.89□□□□□ -0.51
MSLN-202ENST00000545450 TGP01266 2768 aa11.88□□□□□ -0.51
MSLN-202ENST00000545450 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.88□□□□□ -0.51
MSLN-202ENST00000545450 C1orf64Q8NEQ6 169 aa11.88□□□□□ -0.51
MSLN-202ENST00000545450 UBE2BP63146 152 aa11.88□□□□□ -0.51
MSLN-202ENST00000545450 HCG22E2RYF7 251 aa11.86□□□□□ -0.51
MSLN-202ENST00000545450 NBDYA0A0U1RRE5 68 aa11.86□□□□□ -0.51
MSLN-202ENST00000545450 LINC00476Q8WZB0 136 aa11.86□□□□□ -0.51
MSLN-202ENST00000545450 PSCAO43653 123 aa11.84□□□□□ -0.51
MSLN-202ENST00000545450 Q1T7F1 81 aa11.84□□□□□ -0.51
MSLN-202ENST00000545450 REG3GQ6UW15 175 aa11.84□□□□□ -0.51
MSLN-202ENST00000545450 CYP4F30PQ9H0H9 118 aa11.83□□□□□ -0.52
MSLN-202ENST00000545450 KMT2AQ03164 3969 aa11.83□□□□□ -0.52
MSLN-202ENST00000545450 IGFL1Q6UW32 110 aa11.81□□□□□ -0.52
MSLN-202ENST00000545450 LRCOL1A6NCL2 159 aa11.8□□□□□ -0.52
MSLN-202ENST00000545450 A0A0G2JQZ4 141 aa11.78□□□□□ -0.52
MSLN-202ENST00000545450 A0A1W2PNN7 141 aa11.78□□□□□ -0.52
MSLN-202ENST00000545450 Q6ZRN7 208 aaPredicted RBP11.78□□□□□ -0.52
MSLN-202ENST00000545450 IGLV8-61A0A075B6I0 122 aa11.77□□□□□ -0.53
MSLN-202ENST00000545450 NDUFB1O75438 58 aa11.76□□□□□ -0.53
MSLN-202ENST00000545450 C1orf195Q5TG92 126 aa11.75□□□□□ -0.53
MSLN-202ENST00000545450 CNBPP62633 177 aaKnown RBP11.75□□□□□ -0.53
MSLN-202ENST00000545450 DEFB116Q30KQ4 102 aa11.75□□□□□ -0.53
MSLN-202ENST00000545450 A0A087WSZ3 146 aa11.72□□□□□ -0.53
MSLN-202ENST00000545450 WFDC13Q8IUB5 93 aa11.72□□□□□ -0.53
MSLN-202ENST00000545450 DNAH2Q9P225 4427 aa11.72□□□□□ -0.53
MSLN-202ENST00000545450 C14orf177Q52M58 125 aa11.72□□□□□ -0.53
MSLN-202ENST00000545450 PRR4Q16378 134 aa11.71□□□□□ -0.53
MSLN-202ENST00000545450 KRTAP29-1A8MX34 341 aaPredicted RBP11.71□□□□□ -0.54
MSLN-202ENST00000545450 MP68P56378 58 aa11.71□□□□□ -0.54
MSLN-202ENST00000545450 TRAV22A0A0B4J277 110 aa11.7□□□□□ -0.54
MSLN-202ENST00000545450 PRR15Q8IV56 129 aa11.69□□□□□ -0.54
MSLN-202ENST00000545450 PRLHP81277 87 aa11.69□□□□□ -0.54
MSLN-202ENST00000545450 Q6ZR54 194 aa11.69□□□□□ -0.54
MSLN-202ENST00000545450 WWC2-AS2Q96NR7 200 aa11.69□□□□□ -0.54
MSLN-202ENST00000545450 A0A096LNI7 61 aa11.67□□□□□ -0.54
MSLN-202ENST00000545450 RPL37AP61513 92 aaKnown RBP11.66□□□□□ -0.54
MSLN-202ENST00000545450 DNAH6Q9C0G6 4158 aa11.66□□□□□ -0.54
MSLN-202ENST00000545450 PSPHP1O15172 72 aa11.65□□□□□ -0.54
MSLN-202ENST00000545450 LINC00208Q96KT6 92 aa11.65□□□□□ -0.54
MSLN-202ENST00000545450 C16orf90A8MZG2 172 aa11.65□□□□□ -0.54
MSLN-202ENST00000545450 HECTD4Q9Y4D8 3996 aa11.65□□□□□ -0.55
MSLN-202ENST00000545450 IGKV2-24A0A0C4DH68 120 aa11.64□□□□□ -0.55
MSLN-202ENST00000545450 LY6G6CO95867 125 aa11.64□□□□□ -0.55
MSLN-202ENST00000545450 H3BPC8 53 aa11.63□□□□□ -0.55
MSLN-202ENST00000545450 UBE2AP49459 152 aa11.62□□□□□ -0.55
MSLN-202ENST00000545450 SPANXA2-OT1Q8N9U9 137 aa11.62□□□□□ -0.55
MSLN-202ENST00000545450 V9GYY9 64 aa11.62□□□□□ -0.55
MSLN-202ENST00000545450 ALMS1Q8TCU4 4167 aa11.61□□□□□ -0.55
MSLN-202ENST00000545450 CASC2Q6XLA1 102 aa11.61□□□□□ -0.55
MSLN-202ENST00000545450 C9orf163Q8N9P6 203 aa11.61□□□□□ -0.55
MSLN-202ENST00000545450 A0A087WTM6 91 aa11.6□□□□□ -0.55
MSLN-202ENST00000545450 H0Y9P7 68 aa11.6□□□□□ -0.55
MSLN-202ENST00000545450 CHTF8P0CG12 524 aa11.59□□□□□ -0.55
MSLN-202ENST00000545450 SPRR1BP22528 89 aa11.59□□□□□ -0.55
MSLN-202ENST00000545450 A8MWP4 228 aa11.58□□□□□ -0.56
MSLN-202ENST00000545450 LINC00472Q9H8W2 130 aa11.58□□□□□ -0.56
MSLN-202ENST00000545450 DNAH17Q9UFH2 4485 aa11.57□□□□□ -0.56
MSLN-202ENST00000545450 A8MUN3 132 aa11.57□□□□□ -0.56
MSLN-202ENST00000545450 C1orf134Q5TEV5 83 aa11.55□□□□□ -0.56
MSLN-202ENST00000545450 FRAS1Q86XX4 4008 aa11.55□□□□□ -0.56
MSLN-202ENST00000545450 H0Y9J4 135 aa11.55□□□□□ -0.56
MSLN-202ENST00000545450 KRTAP11-1Q8IUC1 163 aa11.54□□□□□ -0.56
MSLN-202ENST00000545450 HYDINQ4G0P3 5121 aa11.53□□□□□ -0.56
MSLN-202ENST00000545450 PANO1I0J062 215 aa11.52□□□□□ -0.57
MSLN-202ENST00000545450 Q5VV11 94 aa11.52□□□□□ -0.57
MSLN-202ENST00000545450 PHF5AQ7RTV0 110 aaKnown RBP11.5□□□□□ -0.57
MSLN-202ENST00000545450 Q8N9P0 234 aaPredicted RBP11.5□□□□□ -0.57
MSLN-202ENST00000545450 PMAIP1Q13794 54 aa11.48□□□□□ -0.57
MSLN-202ENST00000545450 RTL8CO15255 209 aa11.47□□□□□ -0.57
MSLN-202ENST00000545450 LIMD2Q9BT23 127 aa11.47□□□□□ -0.57
MSLN-202ENST00000545450 MMP24-AS1A0A0U1RRL7 71 aa11.46□□□□□ -0.57
MSLN-202ENST00000545450 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.46□□□□□ -0.57
MSLN-202ENST00000545450 SPACA4Q8TDM5 124 aa11.44□□□□□ -0.58
MSLN-202ENST00000545450 DNAH11Q96DT5 4516 aa11.43□□□□□ -0.58
MSLN-202ENST00000545450 SEC61GP60059 68 aa11.42□□□□□ -0.58
MSLN-202ENST00000545450 IGLV7-46A0A075B6I9 117 aa11.41□□□□□ -0.58
MSLN-202ENST00000545450 SRRM2Q9UQ35 2752 aaKnown RBP11.41□□□□□ -0.58
MSLN-202ENST00000545450 A8MU10 97 aa11.4□□□□□ -0.58
MSLN-202ENST00000545450 DNAH5Q8TE73 4624 aa11.4□□□□□ -0.59
MSLN-202ENST00000545450 IGLV5-52A0A0A0MRZ9 124 aa11.4□□□□□ -0.59
MSLN-202ENST00000545450 FAT2Q9NYQ8 4349 aa11.39□□□□□ -0.59
MSLN-202ENST00000545450 CHKB-CPT1BH3BT56 60 aa11.38□□□□□ -0.59
MSLN-202ENST00000545450 ASB16-AS1Q495Z4 193 aa11.38□□□□□ -0.59
MSLN-202ENST00000545450 COA5Q86WW8 74 aa11.38□□□□□ -0.59
MSLN-202ENST00000545450 PRR15LQ9BU68 103 aa11.38□□□□□ -0.59
MSLN-202ENST00000545450 SACSQ9NZJ4 4579 aa11.38□□□□□ -0.59
MSLN-202ENST00000545450 KRTAP13-1Q8IUC0 172 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 301 ms