RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 ZCCHC13Q8WW36 166 aaKnown RBP8.11□□□□□ -1.11
CPSF7-223ENST00000544669 ZNF706Q9Y5V0 76 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-223ENST00000544669 A8MWP4 228 aa8.1□□□□□ -1.11
CPSF7-223ENST00000544669 PRR15Q8IV56 129 aa8.1□□□□□ -1.11
CPSF7-223ENST00000544669 MDFIQ99750 246 aa8.1□□□□□ -1.11
CPSF7-223ENST00000544669 HRCT1Q6UXD1 115 aa8.08□□□□□ -1.12
CPSF7-223ENST00000544669 MAST4O15021 2626 aa8.08□□□□□ -1.12
CPSF7-223ENST00000544669 hDV103S1A0JD37 113 aa8.08□□□□□ -1.12
CPSF7-223ENST00000544669 CHTF8P0CG12 524 aa8.07□□□□□ -1.12
CPSF7-223ENST00000544669 CASC2Q6XLA1 102 aa8.07□□□□□ -1.12
CPSF7-223ENST00000544669 LINC00472Q9H8W2 130 aa8.07□□□□□ -1.12
CPSF7-223ENST00000544669 FBN1P35555 2871 aaKnown RBP8.06□□□□□ -1.12
CPSF7-223ENST00000544669 Q6ZRN7 208 aaPredicted RBP8.06□□□□□ -1.12
CPSF7-223ENST00000544669 KRTAP13-1Q8IUC0 172 aa8.06□□□□□ -1.12
CPSF7-223ENST00000544669 CYP4F30PQ9H0H9 118 aa8.06□□□□□ -1.12
CPSF7-223ENST00000544669 STAB1Q9NY15 2570 aa8.06□□□□□ -1.12
CPSF7-223ENST00000544669 KRTAP29-1A8MX34 341 aaPredicted RBP8.06□□□□□ -1.12
CPSF7-223ENST00000544669 DNAH1Q9P2D7 4330 aa8.05□□□□□ -1.12
CPSF7-223ENST00000544669 SPACA4Q8TDM5 124 aa8.05□□□□□ -1.12
CPSF7-223ENST00000544669 FP248Q71RG6 208 aaPredicted RBP8.04□□□□□ -1.12
CPSF7-223ENST00000544669 PKD1L1Q8TDX9 2849 aa8.04□□□□□ -1.12
CPSF7-223ENST00000544669 FLNBO75369 2602 aaKnown RBP8.04□□□□□ -1.12
CPSF7-223ENST00000544669 WFDC13Q8IUB5 93 aa8.03□□□□□ -1.12
CPSF7-223ENST00000544669 CMYA5Q8N3K9 4069 aa8.03□□□□□ -1.12
CPSF7-223ENST00000544669 BAHCC1Q9P281 2608 aa8.02□□□□□ -1.13
CPSF7-223ENST00000544669 LINC00483Q53H64 154 aa8.02□□□□□ -1.13
CPSF7-223ENST00000544669 KRTAP11-1Q8IUC1 163 aa8.02□□□□□ -1.13
CPSF7-223ENST00000544669 SPANXA2-OT1Q8N9U9 137 aa8.02□□□□□ -1.13
CPSF7-223ENST00000544669 TP53AIP1Q9HCN2 124 aa8.01□□□□□ -1.13
CPSF7-223ENST00000544669 HUWE1Q7Z6Z7 4374 aaKnown RBP8.01□□□□□ -1.13
CPSF7-223ENST00000544669 DEFB116Q30KQ4 102 aa8.01□□□□□ -1.13
CPSF7-223ENST00000544669 A0A087WTM6 91 aa8□□□□□ -1.13
CPSF7-223ENST00000544669 TRAV22A0A0B4J277 110 aa8□□□□□ -1.13
CPSF7-223ENST00000544669 A0A0G2JQZ4 141 aa8□□□□□ -1.13
CPSF7-223ENST00000544669 ANK2Q01484 3957 aa8□□□□□ -1.13
CPSF7-223ENST00000544669 PRO0628Q9UI54 55 aa7.99□□□□□ -1.13
CPSF7-223ENST00000544669 MOBPQ13875 183 aa7.99□□□□□ -1.13
CPSF7-223ENST00000544669 V9GYY9 64 aa7.99□□□□□ -1.13
CPSF7-223ENST00000544669 H0Y9P7 68 aa7.98□□□□□ -1.13
CPSF7-223ENST00000544669 LINC00208Q96KT6 92 aa7.97□□□□□ -1.13
CPSF7-223ENST00000544669 CDK2AP2O75956 126 aa7.96□□□□□ -1.14
CPSF7-223ENST00000544669 C1orf64Q8NEQ6 169 aa7.96□□□□□ -1.14
CPSF7-223ENST00000544669 PLAC8Q9NZF1 115 aa7.96□□□□□ -1.14
CPSF7-223ENST00000544669 NOTCH1P46531 2555 aa7.95□□□□□ -1.14
CPSF7-223ENST00000544669 Q1T7F1 81 aa7.95□□□□□ -1.14
CPSF7-223ENST00000544669 RTL8CO15255 209 aa7.94□□□□□ -1.14
CPSF7-223ENST00000544669 IGLV5-52A0A0A0MRZ9 124 aa7.94□□□□□ -1.14
CPSF7-223ENST00000544669 ZNF861PO60384 105 aa7.94□□□□□ -1.14
CPSF7-223ENST00000544669 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-223ENST00000544669 IGLV9-49A0A0B4J1Y8 123 aa7.92□□□□□ -1.14
CPSF7-223ENST00000544669 MMP24-AS1A0A0U1RRL7 71 aa7.92□□□□□ -1.14
CPSF7-223ENST00000544669 PANO1I0J062 215 aa7.92□□□□□ -1.14
CPSF7-223ENST00000544669 COL6A5A8TX70 2615 aa7.92□□□□□ -1.14
CPSF7-223ENST00000544669 Q6ZR54 194 aa7.92□□□□□ -1.14
CPSF7-223ENST00000544669 ASB16-AS1Q495Z4 193 aa7.91□□□□□ -1.14
CPSF7-223ENST00000544669 FAM229BQ4G0N7 80 aa7.91□□□□□ -1.14
CPSF7-223ENST00000544669 LINC00336Q6ZUF6 198 aa7.91□□□□□ -1.14
CPSF7-223ENST00000544669 MPLKIPQ8TAP9 179 aa7.91□□□□□ -1.14
CPSF7-223ENST00000544669 PSORS1C2Q9UIG4 136 aa7.89□□□□□ -1.15
CPSF7-223ENST00000544669 WWC2-AS2Q96NR7 200 aa7.89□□□□□ -1.15
CPSF7-223ENST00000544669 CD164Q04900 197 aa7.88□□□□□ -1.15
CPSF7-223ENST00000544669 C1orf134Q5TEV5 83 aa7.88□□□□□ -1.15
CPSF7-223ENST00000544669 C1orf195Q5TG92 126 aa7.88□□□□□ -1.15
CPSF7-223ENST00000544669 C8orf17Q9NRJ1 99 aa7.88□□□□□ -1.15
CPSF7-223ENST00000544669 NBEAL1Q6ZS30 2694 aa7.88□□□□□ -1.15
CPSF7-223ENST00000544669 A0A1B0GVX0 72 aa7.87□□□□□ -1.15
CPSF7-223ENST00000544669 Q96NJ1 140 aa7.87□□□□□ -1.15
CPSF7-223ENST00000544669 DYNC2H1Q8NCM8 4307 aaKnown RBP7.85□□□□□ -1.15
CPSF7-223ENST00000544669 IGLV7-46A0A075B6I9 117 aa7.85□□□□□ -1.15
CPSF7-223ENST00000544669 SSBP3-AS1Q7Z2R9 100 aa7.84□□□□□ -1.15
CPSF7-223ENST00000544669 BRK1Q8WUW1 75 aa7.83□□□□□ -1.16
CPSF7-223ENST00000544669 MRPL34Q9BQ48 92 aaKnown RBP7.83□□□□□ -1.16
CPSF7-223ENST00000544669 LIMD2Q9BT23 127 aa7.83□□□□□ -1.16
CPSF7-223ENST00000544669 MGAM2Q2M2H8 2515 aa7.83□□□□□ -1.16
CPSF7-223ENST00000544669 IGLV7-43P04211 117 aa7.82□□□□□ -1.16
CPSF7-223ENST00000544669 DNAH9Q9NYC9 4486 aa7.8□□□□□ -1.16
CPSF7-223ENST00000544669 IGHV6-1A0A0B4J1U7 121 aa7.8□□□□□ -1.16
CPSF7-223ENST00000544669 STAB2Q8WWQ8 2551 aa7.8□□□□□ -1.16
CPSF7-223ENST00000544669 PRR4Q16378 134 aa7.8□□□□□ -1.16
CPSF7-223ENST00000544669 C8orf87E5RJ46 101 aa7.79□□□□□ -1.16
CPSF7-223ENST00000544669 NDUFS5O43920 106 aa7.78□□□□□ -1.16
CPSF7-223ENST00000544669 LOC101927531A0A1B0GV80 90 aa7.76□□□□□ -1.17
CPSF7-223ENST00000544669 COA5Q86WW8 74 aa7.71□□□□□ -1.17
CPSF7-223ENST00000544669 DNAH10Q8IVF4 4471 aa7.71□□□□□ -1.17
CPSF7-223ENST00000544669 LY6G6CO95867 125 aa7.71□□□□□ -1.18
CPSF7-223ENST00000544669 Q8N9P0 234 aaPredicted RBP7.71□□□□□ -1.18
CPSF7-223ENST00000544669 CIRBP-AS1Q8TBR5 109 aa7.7□□□□□ -1.18
CPSF7-223ENST00000544669 PSPHP1O15172 72 aa7.68□□□□□ -1.18
CPSF7-223ENST00000544669 PCOTHQ58A44 107 aa7.68□□□□□ -1.18
CPSF7-223ENST00000544669 ANAPC11Q9NYG5 84 aa7.68□□□□□ -1.18
CPSF7-223ENST00000544669 COL7A1Q02388 2944 aa7.67□□□□□ -1.18
CPSF7-223ENST00000544669 SPINK6Q6UWN8 80 aa7.66□□□□□ -1.18
CPSF7-223ENST00000544669 A8MUN3 132 aa7.65□□□□□ -1.18
CPSF7-223ENST00000544669 VPS13DQ5THJ4 4388 aa7.65□□□□□ -1.19
CPSF7-223ENST00000544669 FAM229AH3BQW9 127 aa7.64□□□□□ -1.19
CPSF7-223ENST00000544669 LINC00313P59037 77 aa7.64□□□□□ -1.19
CPSF7-223ENST00000544669 PLECQ15149 4684 aaKnown RBP7.63□□□□□ -1.19
CPSF7-223ENST00000544669 Q5VV11 94 aa7.63□□□□□ -1.19
CPSF7-223ENST00000544669 Q6ZSA8 131 aa7.63□□□□□ -1.19
CPSF7-223ENST00000544669 Q75L30 129 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms