RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 RPL37AP61513 92 aaKnown RBP18.4■□□□□ 0.54
CCM2-219ENST00000544363 DSCR8Q96T75 97 aa18.38■□□□□ 0.53
CCM2-219ENST00000544363 LINC00483Q53H64 154 aa18.37■□□□□ 0.53
CCM2-219ENST00000544363 LOC110117498A0A087WWA1 95 aa18.35■□□□□ 0.53
CCM2-219ENST00000544363 TRBV7-4A0A0J9YYF1 115 aa18.34■□□□□ 0.53
CCM2-219ENST00000544363 F8WEM9 126 aa18.34■□□□□ 0.53
CCM2-219ENST00000544363 Q6ZQT0 140 aa18.32■□□□□ 0.52
CCM2-219ENST00000544363 PDE6GP18545 87 aa18.31■□□□□ 0.52
CCM2-219ENST00000544363 CDK2AP2O75956 126 aa18.31■□□□□ 0.52
CCM2-219ENST00000544363 CCKP06307 115 aa18.31■□□□□ 0.52
CCM2-219ENST00000544363 IGLV8-61A0A075B6I0 122 aa18.27■□□□□ 0.51
CCM2-219ENST00000544363 ANAPC11Q9NYG5 84 aa18.24■□□□□ 0.51
CCM2-219ENST00000544363 FAM240AA0A1B0GVK7 77 aa18.23■□□□□ 0.51
CCM2-219ENST00000544363 KRTAP10-4P60372 401 aaPredicted RBP18.21■□□□□ 0.51
CCM2-219ENST00000544363 ACYP1P07311 99 aa18.2■□□□□ 0.5
CCM2-219ENST00000544363 C21orf62-AS1Q17RA5 79 aa18.2■□□□□ 0.5
CCM2-219ENST00000544363 SPINK6Q6UWN8 80 aa18.2■□□□□ 0.5
CCM2-219ENST00000544363 IGLV9-49A0A0B4J1Y8 123 aa18.17■□□□□ 0.5
CCM2-219ENST00000544363 VPS25Q9BRG1 176 aa18.17■□□□□ 0.5
CCM2-219ENST00000544363 FAT1Q14517 4588 aa18.17■□□□□ 0.5
CCM2-219ENST00000544363 IGFL1Q6UW32 110 aa18.16■□□□□ 0.5
CCM2-219ENST00000544363 Q6JHZ5 121 aa18.16■□□□□ 0.5
CCM2-219ENST00000544363 HSPG2P98160 4391 aa18.14■□□□□ 0.49
CCM2-219ENST00000544363 FAM229AH3BQW9 127 aa18.13■□□□□ 0.49
CCM2-219ENST00000544363 C9orf153Q5TBE3 101 aa18.12■□□□□ 0.49
CCM2-219ENST00000544363 A0A0G2JQZ4 141 aa18.11■□□□□ 0.49
CCM2-219ENST00000544363 A0A1W2PNM2 257 aa18.11■□□□□ 0.49
CCM2-219ENST00000544363 PLA2G1BP04054 148 aaKnown RBP18.11■□□□□ 0.49
CCM2-219ENST00000544363 EPPK1P58107 5090 aaKnown RBP18.1■□□□□ 0.49
CCM2-219ENST00000544363 KRTAP1-4P0C5Y4 121 aa18.1■□□□□ 0.49
CCM2-219ENST00000544363 Q8NBF4 154 aa18.09■□□□□ 0.49
CCM2-219ENST00000544363 FAM229BQ4G0N7 80 aa18.09■□□□□ 0.49
CCM2-219ENST00000544363 CDIP1Q9H305 208 aa18.09■□□□□ 0.49
CCM2-219ENST00000544363 MOBPQ13875 183 aa18.08■□□□□ 0.48
CCM2-219ENST00000544363 LINC00846Q9NV44 126 aa18.07■□□□□ 0.48
CCM2-219ENST00000544363 RYR1P21817 5038 aa18.07■□□□□ 0.48
CCM2-219ENST00000544363 Q5VSD8 79 aa18.02■□□□□ 0.48
CCM2-219ENST00000544363 A0A087X002 238 aa18.01■□□□□ 0.47
CCM2-219ENST00000544363 A0A1B0GW54 56 aa18.01■□□□□ 0.47
CCM2-219ENST00000544363 CRYGAP11844 174 aa18■□□□□ 0.47
CCM2-219ENST00000544363 Q6Q795 121 aa17.98■□□□□ 0.47
CCM2-219ENST00000544363 KRTAP13-2Q52LG2 175 aa17.97■□□□□ 0.47
CCM2-219ENST00000544363 SSBP3-AS1Q7Z2R9 100 aa17.96■□□□□ 0.47
CCM2-219ENST00000544363 PKHD1L1Q86WI1 4243 aa17.94■□□□□ 0.46
CCM2-219ENST00000544363 UBL5Q9BZL1 73 aa17.93■□□□□ 0.46
CCM2-219ENST00000544363 KRTAP17-1Q9BYP8 105 aa17.9■□□□□ 0.46
CCM2-219ENST00000544363 KIAA1109Q2LD37 5005 aa17.89■□□□□ 0.45
CCM2-219ENST00000544363 Q8N1X5 172 aa17.89■□□□□ 0.45
CCM2-219ENST00000544363 Q6ZVQ6 151 aa17.87■□□□□ 0.45
CCM2-219ENST00000544363 LINC00643Q86TS7 51 aa17.87■□□□□ 0.45
CCM2-219ENST00000544363 A0A087WSZ3 146 aa17.86■□□□□ 0.45
CCM2-219ENST00000544363 TRBV7-7A0A0K0K1E9 115 aa17.84■□□□□ 0.45
CCM2-219ENST00000544363 HRCT1Q6UXD1 115 aa17.84■□□□□ 0.45
CCM2-219ENST00000544363 NREPQ16612 68 aa17.83■□□□□ 0.44
CCM2-219ENST00000544363 PRR26Q8N8Z3 221 aa17.81■□□□□ 0.44
CCM2-219ENST00000544363 TYMSOSQ8TAI1 123 aa17.81■□□□□ 0.44
CCM2-219ENST00000544363 CD164Q04900 197 aa17.8■□□□□ 0.44
CCM2-219ENST00000544363 MT-ATP8P03928 68 aa17.79■□□□□ 0.44
CCM2-219ENST00000544363 SIGMAR1Q99720 223 aa17.77■□□□□ 0.44
CCM2-219ENST00000544363 IGKV3D-7A0A0C4DH55 119 aa17.7■□□□□ 0.42
CCM2-219ENST00000544363 ATP5EP2Q5VTU8 51 aa17.7■□□□□ 0.42
CCM2-219ENST00000544363 SS18L2Q9UHA2 77 aa17.68■□□□□ 0.42
CCM2-219ENST00000544363 CXCL6P80162 114 aa17.64■□□□□ 0.41
CCM2-219ENST00000544363 BPY2O14599 106 aa17.63■□□□□ 0.41
CCM2-219ENST00000544363 C4orf48Q5BLP8 95 aa17.63■□□□□ 0.41
CCM2-219ENST00000544363 LINC00472Q9H8W2 130 aa17.61■□□□□ 0.41
CCM2-219ENST00000544363 LINC00304Q8N9R0 145 aa17.6■□□□□ 0.41
CCM2-219ENST00000544363 BIRC6Q9NR09 4857 aa17.57■□□□□ 0.4
CCM2-219ENST00000544363 SPINK1P00995 79 aa17.57■□□□□ 0.4
CCM2-219ENST00000544363 IMUPQ9GZP8 106 aa17.57■□□□□ 0.4
CCM2-219ENST00000544363 DEFB116Q30KQ4 102 aa17.56■□□□□ 0.4
CCM2-219ENST00000544363 Q5XG85 94 aa17.55■□□□□ 0.4
CCM2-219ENST00000544363 SPAG11AQ6PDA7 123 aa17.55■□□□□ 0.4
CCM2-219ENST00000544363 Q96NJ1 140 aa17.54■□□□□ 0.4
CCM2-219ENST00000544363 ASB16-AS1Q495Z4 193 aa17.52■□□□□ 0.4
CCM2-219ENST00000544363 LIMD2Q9BT23 127 aa17.51■□□□□ 0.39
CCM2-219ENST00000544363 DSCR10P59022 87 aa17.5■□□□□ 0.39
CCM2-219ENST00000544363 KRTAP10-8P60410 259 aa17.5■□□□□ 0.39
CCM2-219ENST00000544363 KRTAP4-5Q9BYR2 181 aa17.49■□□□□ 0.39
CCM2-219ENST00000544363 HIST1H4AP62805 103 aaKnown RBP17.48■□□□□ 0.39
CCM2-219ENST00000544363 RPS29P62273 56 aaKnown RBP17.47■□□□□ 0.39
CCM2-219ENST00000544363 J3KT08 172 aa17.47■□□□□ 0.39
CCM2-219ENST00000544363 LRP1Q07954 4544 aaKnown RBP17.46■□□□□ 0.39
CCM2-219ENST00000544363 Q8N9L7 120 aa17.45■□□□□ 0.38
CCM2-219ENST00000544363 FAT3Q8TDW7 4589 aa17.44■□□□□ 0.38
CCM2-219ENST00000544363 IGKV4-1P06312 121 aa17.43■□□□□ 0.38
CCM2-219ENST00000544363 TNXBP22105 4242 aa17.42■□□□□ 0.38
CCM2-219ENST00000544363 FLG2Q5D862 2391 aaPredicted RBP17.41■□□□□ 0.38
CCM2-219ENST00000544363 A0A087WVE0 104 aa17.39■□□□□ 0.38
CCM2-219ENST00000544363 K7EQZ3 153 aa17.39■□□□□ 0.37
CCM2-219ENST00000544363 A8MWP4 228 aa17.37■□□□□ 0.37
CCM2-219ENST00000544363 C1orf195Q5TG92 126 aa17.37■□□□□ 0.37
CCM2-219ENST00000544363 HERC2O95714 4834 aa17.31■□□□□ 0.36
CCM2-219ENST00000544363 OXTP01178 125 aa17.31■□□□□ 0.36
CCM2-219ENST00000544363 PRR15Q8IV56 129 aa17.31■□□□□ 0.36
CCM2-219ENST00000544363 NDUFB1O75438 58 aa17.3■□□□□ 0.36
CCM2-219ENST00000544363 MT1HL1P0DM35 61 aa17.3■□□□□ 0.36
CCM2-219ENST00000544363 SCGB1A1P11684 91 aa17.3■□□□□ 0.36
CCM2-219ENST00000544363 MYCBP2O75592 4640 aa17.27■□□□□ 0.35
CCM2-219ENST00000544363 FAM236AA0A1B0GUQ0 79 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms