RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 PKIGQ9Y2B9 76 aa8.48□□□□□ -1.05
PPME1-208ENST00000543525 IGFL1Q6UW32 110 aa8.48□□□□□ -1.05
PPME1-208ENST00000543525 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.47□□□□□ -1.05
PPME1-208ENST00000543525 HIGD2AQ9BW72 106 aa8.47□□□□□ -1.05
PPME1-208ENST00000543525 HUWE1Q7Z6Z7 4374 aaKnown RBP8.46□□□□□ -1.05
PPME1-208ENST00000543525 UBE2AP49459 152 aa8.46□□□□□ -1.06
PPME1-208ENST00000543525 FAM30AQ9NZY2 134 aa8.46□□□□□ -1.06
PPME1-208ENST00000543525 C5orf47Q569G3 176 aa8.45□□□□□ -1.06
PPME1-208ENST00000543525 Q5XG85 94 aa8.45□□□□□ -1.06
PPME1-208ENST00000543525 H0Y9J4 135 aa8.44□□□□□ -1.06
PPME1-208ENST00000543525 EPPK1P58107 5090 aaKnown RBP8.44□□□□□ -1.06
PPME1-208ENST00000543525 K7EQZ3 153 aa8.44□□□□□ -1.06
PPME1-208ENST00000543525 PHF5AQ7RTV0 110 aaKnown RBP8.44□□□□□ -1.06
PPME1-208ENST00000543525 CHTF8P0CG12 524 aa8.42□□□□□ -1.06
PPME1-208ENST00000543525 C9orf163Q8N9P6 203 aa8.42□□□□□ -1.06
PPME1-208ENST00000543525 KRTAP17-1Q9BYP8 105 aa8.42□□□□□ -1.06
PPME1-208ENST00000543525 A0A0G2JQZ4 141 aa8.42□□□□□ -1.06
PPME1-208ENST00000543525 LCE6AA0A183 80 aa8.42□□□□□ -1.06
PPME1-208ENST00000543525 C4orf26Q17RF5 130 aa8.42□□□□□ -1.06
PPME1-208ENST00000543525 WWC2-AS2Q96NR7 200 aa8.42□□□□□ -1.06
PPME1-208ENST00000543525 SMIM26A0A096LP01 95 aa8.41□□□□□ -1.06
PPME1-208ENST00000543525 HCG22E2RYF7 251 aa8.41□□□□□ -1.06
PPME1-208ENST00000543525 SPRR1BP22528 89 aa8.41□□□□□ -1.06
PPME1-208ENST00000543525 B9D2Q9BPU9 175 aa8.41□□□□□ -1.06
PPME1-208ENST00000543525 LINC00474Q9P2X8 69 aa8.41□□□□□ -1.06
PPME1-208ENST00000543525 RYR2Q92736 4967 aa8.4□□□□□ -1.06
PPME1-208ENST00000543525 A0A087WSZ3 146 aa8.4□□□□□ -1.06
PPME1-208ENST00000543525 NBDYA0A0U1RRE5 68 aa8.39□□□□□ -1.07
PPME1-208ENST00000543525 LRCOL1A6NCL2 159 aa8.39□□□□□ -1.07
PPME1-208ENST00000543525 KRTAP11-1Q8IUC1 163 aa8.39□□□□□ -1.07
PPME1-208ENST00000543525 NUPR2A6NF83 97 aa8.37□□□□□ -1.07
PPME1-208ENST00000543525 HRCT1Q6UXD1 115 aa8.37□□□□□ -1.07
PPME1-208ENST00000543525 DNAH9Q9NYC9 4486 aa8.36□□□□□ -1.07
PPME1-208ENST00000543525 DEFB116Q30KQ4 102 aa8.36□□□□□ -1.07
PPME1-208ENST00000543525 DYNC2H1Q8NCM8 4307 aaKnown RBP8.36□□□□□ -1.07
PPME1-208ENST00000543525 COL7A1Q02388 2944 aa8.35□□□□□ -1.07
PPME1-208ENST00000543525 Q6ZRN7 208 aaPredicted RBP8.33□□□□□ -1.08
PPME1-208ENST00000543525 ZCCHC13Q8WW36 166 aaKnown RBP8.33□□□□□ -1.08
PPME1-208ENST00000543525 WFDC13Q8IUB5 93 aa8.32□□□□□ -1.08
PPME1-208ENST00000543525 FP248Q71RG6 208 aaPredicted RBP8.31□□□□□ -1.08
PPME1-208ENST00000543525 RPL37AP61513 92 aaKnown RBP8.31□□□□□ -1.08
PPME1-208ENST00000543525 SACSQ9NZJ4 4579 aa8.3□□□□□ -1.08
PPME1-208ENST00000543525 KRTAP13-1Q8IUC0 172 aa8.3□□□□□ -1.08
PPME1-208ENST00000543525 J3QL48 77 aa8.29□□□□□ -1.08
PPME1-208ENST00000543525 PANO1I0J062 215 aa8.29□□□□□ -1.08
PPME1-208ENST00000543525 PRR15Q8IV56 129 aa8.29□□□□□ -1.08
PPME1-208ENST00000543525 LINC00472Q9H8W2 130 aa8.29□□□□□ -1.08
PPME1-208ENST00000543525 A8MWP4 228 aa8.28□□□□□ -1.08
PPME1-208ENST00000543525 KRTAP29-1A8MX34 341 aaPredicted RBP8.28□□□□□ -1.08
PPME1-208ENST00000543525 MP68P56378 58 aa8.28□□□□□ -1.08
PPME1-208ENST00000543525 SPACA4Q8TDM5 124 aa8.28□□□□□ -1.08
PPME1-208ENST00000543525 CASC2Q6XLA1 102 aa8.27□□□□□ -1.09
PPME1-208ENST00000543525 STAB2Q8WWQ8 2551 aa8.26□□□□□ -1.09
PPME1-208ENST00000543525 NDUFB1O75438 58 aa8.25□□□□□ -1.09
PPME1-208ENST00000543525 DNAH10Q8IVF4 4471 aa8.25□□□□□ -1.09
PPME1-208ENST00000543525 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.25□□□□□ -1.09
PPME1-208ENST00000543525 TENM2Q9NT68 2774 aa8.24□□□□□ -1.09
PPME1-208ENST00000543525 A0A087WTM6 91 aa8.24□□□□□ -1.09
PPME1-208ENST00000543525 FAM229BQ4G0N7 80 aa8.24□□□□□ -1.09
PPME1-208ENST00000543525 hDV103S1A0JD37 113 aa8.23□□□□□ -1.09
PPME1-208ENST00000543525 H3BPC8 53 aa8.23□□□□□ -1.09
PPME1-208ENST00000543525 ZNF706Q9Y5V0 76 aaPredicted RBP8.22□□□□□ -1.09
PPME1-208ENST00000543525 LINC00483Q53H64 154 aa8.21□□□□□ -1.1
PPME1-208ENST00000543525 CYP4F30PQ9H0H9 118 aa8.21□□□□□ -1.1
PPME1-208ENST00000543525 IGLV9-49A0A0B4J1Y8 123 aa8.2□□□□□ -1.1
PPME1-208ENST00000543525 TRAV22A0A0B4J277 110 aa8.2□□□□□ -1.1
PPME1-208ENST00000543525 H0Y9P7 68 aa8.2□□□□□ -1.1
PPME1-208ENST00000543525 LINC00208Q96KT6 92 aa8.2□□□□□ -1.1
PPME1-208ENST00000543525 RTL8CO15255 209 aa8.19□□□□□ -1.1
PPME1-208ENST00000543525 C1orf64Q8NEQ6 169 aa8.19□□□□□ -1.1
PPME1-208ENST00000543525 MPLKIPQ8TAP9 179 aa8.19□□□□□ -1.1
PPME1-208ENST00000543525 MMP24-AS1A0A0U1RRL7 71 aa8.17□□□□□ -1.1
PPME1-208ENST00000543525 LINC00336Q6ZUF6 198 aa8.16□□□□□ -1.1
PPME1-208ENST00000543525 HYDINQ4G0P3 5121 aa8.16□□□□□ -1.1
PPME1-208ENST00000543525 LYSTQ99698 3801 aa8.16□□□□□ -1.1
PPME1-208ENST00000543525 IGLV5-52A0A0A0MRZ9 124 aa8.15□□□□□ -1.1
PPME1-208ENST00000543525 PLAC8Q9NZF1 115 aa8.15□□□□□ -1.1
PPME1-208ENST00000543525 PSORS1C2Q9UIG4 136 aa8.15□□□□□ -1.1
PPME1-208ENST00000543525 Q96NJ1 140 aa8.15□□□□□ -1.11
PPME1-208ENST00000543525 DNAH7Q8WXX0 4024 aa8.14□□□□□ -1.11
PPME1-208ENST00000543525 Q6ZR54 194 aa8.14□□□□□ -1.11
PPME1-208ENST00000543525 PRR4Q16378 134 aa8.13□□□□□ -1.11
PPME1-208ENST00000543525 SPANXA2-OT1Q8N9U9 137 aa8.13□□□□□ -1.11
PPME1-208ENST00000543525 PRO0628Q9UI54 55 aa8.13□□□□□ -1.11
PPME1-208ENST00000543525 HERC2O95714 4834 aa8.13□□□□□ -1.11
PPME1-208ENST00000543525 ZNF861PO60384 105 aa8.13□□□□□ -1.11
PPME1-208ENST00000543525 MOBPQ13875 183 aa8.13□□□□□ -1.11
PPME1-208ENST00000543525 TP53AIP1Q9HCN2 124 aa8.11□□□□□ -1.11
PPME1-208ENST00000543525 PLECQ15149 4684 aaKnown RBP8.1□□□□□ -1.11
PPME1-208ENST00000543525 Q1T7F1 81 aa8.1□□□□□ -1.11
PPME1-208ENST00000543525 CDK2AP2O75956 126 aa8.09□□□□□ -1.11
PPME1-208ENST00000543525 ASB16-AS1Q495Z4 193 aa8.09□□□□□ -1.11
PPME1-208ENST00000543525 C8orf17Q9NRJ1 99 aa8.09□□□□□ -1.11
PPME1-208ENST00000543525 C1orf134Q5TEV5 83 aa8.08□□□□□ -1.12
PPME1-208ENST00000543525 CSMD3Q7Z407 3707 aa8.08□□□□□ -1.12
PPME1-208ENST00000543525 A0A1B0GVX0 72 aa8.07□□□□□ -1.12
PPME1-208ENST00000543525 SRRM2Q9UQ35 2752 aaKnown RBP8.06□□□□□ -1.12
PPME1-208ENST00000543525 VPS13DQ5THJ4 4388 aa8.06□□□□□ -1.12
PPME1-208ENST00000543525 IGHV6-1A0A0B4J1U7 121 aa8.05□□□□□ -1.12
PPME1-208ENST00000543525 BRK1Q8WUW1 75 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms