RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 LOC105371267A0A1B0GV96 52 aa7.15□□□□□ -1.26
RTN3-212ENST00000543123 VAMP8Q9BV40 100 aa7.15□□□□□ -1.26
RTN3-212ENST00000543123 IGLV8-61A0A075B6I0 122 aa7.14□□□□□ -1.27
RTN3-212ENST00000543123 F8WEM9 126 aa7.14□□□□□ -1.27
RTN3-212ENST00000543123 VAMP3Q15836 100 aa7.14□□□□□ -1.27
RTN3-212ENST00000543123 PCOTHQ58A44 107 aa7.14□□□□□ -1.27
RTN3-212ENST00000543123 PYY3Q5JQD4 70 aa7.14□□□□□ -1.27
RTN3-212ENST00000543123 SMIM29Q86T20 159 aa7.14□□□□□ -1.27
RTN3-212ENST00000543123 PCP2Q8IVA1 136 aa7.14□□□□□ -1.27
RTN3-212ENST00000543123 TCL1BO95988 128 aa7.13□□□□□ -1.27
RTN3-212ENST00000543123 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
RTN3-212ENST00000543123 SMIM11BQ8TCY0 68 aa7.12□□□□□ -1.27
RTN3-212ENST00000543123 KRTAP4-6Q9BYQ5 205 aa7.12□□□□□ -1.27
RTN3-212ENST00000543123 C1orf195Q5TG92 126 aa7.11□□□□□ -1.27
RTN3-212ENST00000543123 SPATA45Q537H7 98 aa7.09□□□□□ -1.27
RTN3-212ENST00000543123 CFC1BP0CG36 223 aa7.08□□□□□ -1.28
RTN3-212ENST00000543123 PAM16Q9Y3D7 125 aa7.08□□□□□ -1.28
RTN3-212ENST00000543123 Q6JHZ5 121 aa7.07□□□□□ -1.28
RTN3-212ENST00000543123 DLEU1O43261 78 aa7.06□□□□□ -1.28
RTN3-212ENST00000543123 RPL37P61927 97 aaKnown RBP7.06□□□□□ -1.28
RTN3-212ENST00000543123 LINC00575Q6W349 94 aa7.06□□□□□ -1.28
RTN3-212ENST00000543123 A0A0G2JQZ4 141 aa7.05□□□□□ -1.28
RTN3-212ENST00000543123 hADV29S1A0JD25 119 aa7.05□□□□□ -1.28
RTN3-212ENST00000543123 COX8AP10176 69 aa7.05□□□□□ -1.28
RTN3-212ENST00000543123 Q6ZQY7 126 aa7.05□□□□□ -1.28
RTN3-212ENST00000543123 CLEC2BQ92478 149 aa7.05□□□□□ -1.28
RTN3-212ENST00000543123 C12orf57Q99622 126 aa7.05□□□□□ -1.28
RTN3-212ENST00000543123 TSTD3H0UI37 97 aa7.04□□□□□ -1.28
RTN3-212ENST00000543123 KRTAP19-2Q3LHN2 52 aa7.04□□□□□ -1.28
RTN3-212ENST00000543123 MT1HP80294 61 aa7.03□□□□□ -1.28
RTN3-212ENST00000543123 PPDPFLQ8WWR9 84 aa7.03□□□□□ -1.28
RTN3-212ENST00000543123 UQCR10Q9UDW1 63 aa7.03□□□□□ -1.28
RTN3-212ENST00000543123 BVES-AS1Q5T3Y7 98 aa7.02□□□□□ -1.29
RTN3-212ENST00000543123 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.01□□□□□ -1.29
RTN3-212ENST00000543123 TRBV7-7A0A0K0K1E9 115 aa7□□□□□ -1.29
RTN3-212ENST00000543123 OCIAD2Q56VL3 154 aa7□□□□□ -1.29
RTN3-212ENST00000543123 COX6B2Q6YFQ2 88 aa7□□□□□ -1.29
RTN3-212ENST00000543123 HIST1H4GQ99525 98 aa7□□□□□ -1.29
RTN3-212ENST00000543123 HIGD1BQ9P298 99 aa7□□□□□ -1.29
RTN3-212ENST00000543123 SNCGO76070 127 aa6.99□□□□□ -1.29
RTN3-212ENST00000543123 IGFL1Q6UW32 110 aa6.99□□□□□ -1.29
RTN3-212ENST00000543123 C14orf144Q96I85 54 aa6.99□□□□□ -1.29
RTN3-212ENST00000543123 SNHG12Q9BXW3 62 aa6.99□□□□□ -1.29
RTN3-212ENST00000543123 M0R2T5 61 aa6.97□□□□□ -1.29
RTN3-212ENST00000543123 SS18L2Q9UHA2 77 aa6.95□□□□□ -1.3
RTN3-212ENST00000543123 LST1O00453 97 aa6.94□□□□□ -1.3
RTN3-212ENST00000543123 ATP11AUNQ6ZP68 121 aa6.94□□□□□ -1.3
RTN3-212ENST00000543123 CRCT1Q9UGL9 99 aa6.94□□□□□ -1.3
RTN3-212ENST00000543123 FSIP2Q5CZC0 6907 aa6.94□□□□□ -1.3
RTN3-212ENST00000543123 HSD52Q0P140 79 aa6.93□□□□□ -1.3
RTN3-212ENST00000543123 Q75L30 129 aa6.93□□□□□ -1.3
RTN3-212ENST00000543123 RAB37Q96AX2 223 aa6.93□□□□□ -1.3
RTN3-212ENST00000543123 OBSCN-AS1Q96MR7 158 aa6.93□□□□□ -1.3
RTN3-212ENST00000543123 H0YGX0 51 aa6.91□□□□□ -1.3
RTN3-212ENST00000543123 H3BUT2 72 aa6.91□□□□□ -1.3
RTN3-212ENST00000543123 M0R143 59 aa6.91□□□□□ -1.3
RTN3-212ENST00000543123 KRTAP10-6P60371 365 aaPredicted RBP6.91□□□□□ -1.3
RTN3-212ENST00000543123 C2orf91Q6ZV80 131 aa6.91□□□□□ -1.3
RTN3-212ENST00000543123 FLGP20930 4061 aaPredicted RBP6.9□□□□□ -1.31
RTN3-212ENST00000543123 Q6Q795 121 aa6.89□□□□□ -1.31
RTN3-212ENST00000543123 A0A0B4J2C4 111 aa6.88□□□□□ -1.31
RTN3-212ENST00000543123 CFC1P0CG37 223 aa6.88□□□□□ -1.31
RTN3-212ENST00000543123 TEN1Q86WV5 123 aa6.88□□□□□ -1.31
RTN3-212ENST00000543123 CEND1Q8N111 149 aa6.87□□□□□ -1.31
RTN3-212ENST00000543123 Q96NJ1 140 aa6.87□□□□□ -1.31
RTN3-212ENST00000543123 NDUFV3P56181 108 aaKnown RBP6.86□□□□□ -1.31
RTN3-212ENST00000543123 A0A1B0GX51 115 aa6.85□□□□□ -1.31
RTN3-212ENST00000543123 H3BMG7 143 aa6.83□□□□□ -1.32
RTN3-212ENST00000543123 A0A087WSZ3 146 aa6.82□□□□□ -1.32
RTN3-212ENST00000543123 FABP2P12104 132 aa6.82□□□□□ -1.32
RTN3-212ENST00000543123 FAM218AQ96MZ4 157 aa6.82□□□□□ -1.32
RTN3-212ENST00000543123 C20orf166-AS1Q96NR2 134 aa6.82□□□□□ -1.32
RTN3-212ENST00000543123 PRO1854Q9UHT4 67 aa6.82□□□□□ -1.32
RTN3-212ENST00000543123 TRBV20-1A0A075B6N2 111 aa6.8□□□□□ -1.32
RTN3-212ENST00000543123 FXYD2P54710 66 aa6.8□□□□□ -1.32
RTN3-212ENST00000543123 SVIPQ8NHG7 77 aa6.8□□□□□ -1.32
RTN3-212ENST00000543123 PCP4L1A6NKN8 68 aa6.79□□□□□ -1.32
RTN3-212ENST00000543123 A8MUU9 505 aa6.79□□□□□ -1.32
RTN3-212ENST00000543123 H3BQ85 93 aa6.79□□□□□ -1.32
RTN3-212ENST00000543123 DNAL4O96015 105 aa6.78□□□□□ -1.32
RTN3-212ENST00000543123 SIGMAR1Q99720 223 aa6.78□□□□□ -1.32
RTN3-212ENST00000543123 BATFQ16520 125 aa6.76□□□□□ -1.33
RTN3-212ENST00000543123 TRIAP1O43715 76 aa6.75□□□□□ -1.33
RTN3-212ENST00000543123 TRBV7-4A0A0J9YYF1 115 aa6.74□□□□□ -1.33
RTN3-212ENST00000543123 DSCR10P59022 87 aa6.74□□□□□ -1.33
RTN3-212ENST00000543123 LYRM7Q5U5X0 104 aa6.74□□□□□ -1.33
RTN3-212ENST00000543123 ANKRD29Q8N6D5 301 aa6.74□□□□□ -1.33
RTN3-212ENST00000543123 ORMDL1Q9P0S3 153 aa6.74□□□□□ -1.33
RTN3-212ENST00000543123 A0A1W2PNM2 257 aa6.73□□□□□ -1.33
RTN3-212ENST00000543123 COX6CP09669 75 aa6.73□□□□□ -1.33
RTN3-212ENST00000543123 COL5A1-AS1Q5SY13 56 aa6.73□□□□□ -1.33
RTN3-212ENST00000543123 TMEM256-PLSCR3K7ERE1 68 aa6.72□□□□□ -1.33
RTN3-212ENST00000543123 IGKV4-1P06312 121 aa6.72□□□□□ -1.33
RTN3-212ENST00000543123 PSMB2P49721 201 aa6.72□□□□□ -1.33
RTN3-212ENST00000543123 LINC00313P59037 77 aa6.72□□□□□ -1.33
RTN3-212ENST00000543123 K7ERJ3 54 aa6.7□□□□□ -1.34
RTN3-212ENST00000543123 TRACP01848 142 aa6.69□□□□□ -1.34
RTN3-212ENST00000543123 A0A1B0GV72 72 aa6.68□□□□□ -1.34
RTN3-212ENST00000543123 CCKP06307 115 aa6.68□□□□□ -1.34
RTN3-212ENST00000543123 FAM236DA0A1B0GTK5 79 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms