RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 SPANXDQ9BXN6 97 aa4.53□□□□□ -1.68
C2CD3-219ENST00000542930 TRBV7-6A0A0J9YX20 115 aa4.52□□□□□ -1.69
C2CD3-219ENST00000542930 IGKCP01834 107 aa4.52□□□□□ -1.69
C2CD3-219ENST00000542930 KRTAP2-3P0C7H8 128 aa4.52□□□□□ -1.69
C2CD3-219ENST00000542930 Q6ZVH6 145 aa4.52□□□□□ -1.69
C2CD3-219ENST00000542930 Q8N9P0 234 aaPredicted RBP4.52□□□□□ -1.69
C2CD3-219ENST00000542930 KRTAP2-4Q9BYR9 128 aa4.52□□□□□ -1.69
C2CD3-219ENST00000542930 A0A0J9YXY3 114 aa4.51□□□□□ -1.69
C2CD3-219ENST00000542930 A8MWP4 228 aa4.51□□□□□ -1.69
C2CD3-219ENST00000542930 HSPB8Q9UJY1 196 aa4.51□□□□□ -1.69
C2CD3-219ENST00000542930 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
C2CD3-219ENST00000542930 HERVK_113P61574 105 aa4.5□□□□□ -1.69
C2CD3-219ENST00000542930 LITAFQ99732 161 aa4.5□□□□□ -1.69
C2CD3-219ENST00000542930 A0A1B0GWB2 263 aa4.49□□□□□ -1.69
C2CD3-219ENST00000542930 E9PLD3 99 aa4.49□□□□□ -1.69
C2CD3-219ENST00000542930 F8WEM9 126 aa4.49□□□□□ -1.69
C2CD3-219ENST00000542930 LST1O00453 97 aa4.49□□□□□ -1.69
C2CD3-219ENST00000542930 Q6JHZ5 121 aa4.49□□□□□ -1.69
C2CD3-219ENST00000542930 LINC00308Q8TCZ7 52 aa4.49□□□□□ -1.69
C2CD3-219ENST00000542930 CLEC2BQ92478 149 aa4.49□□□□□ -1.69
C2CD3-219ENST00000542930 TTTY13Q9BZ97 58 aa4.49□□□□□ -1.69
C2CD3-219ENST00000542930 SYS1-DBNDD2H3BUS1 97 aa4.48□□□□□ -1.69
C2CD3-219ENST00000542930 HIST1H2BKO60814 126 aa4.48□□□□□ -1.69
C2CD3-219ENST00000542930 HIST1H2BJP06899 126 aa4.48□□□□□ -1.69
C2CD3-219ENST00000542930 HIST1H2BOP23527 126 aa4.48□□□□□ -1.69
C2CD3-219ENST00000542930 HIST1H2BBP33778 126 aa4.48□□□□□ -1.69
C2CD3-219ENST00000542930 HIST1H2BDP58876 126 aa4.48□□□□□ -1.69
C2CD3-219ENST00000542930 HIST1H2BCP62807 126 aa4.48□□□□□ -1.69
C2CD3-219ENST00000542930 HIST2H2BEQ16778 126 aa4.48□□□□□ -1.69
C2CD3-219ENST00000542930 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.48□□□□□ -1.69
C2CD3-219ENST00000542930 NOTCH2NLQ7Z3S9 236 aa4.48□□□□□ -1.69
C2CD3-219ENST00000542930 LINC00518Q8N0U6 118 aa4.48□□□□□ -1.69
C2CD3-219ENST00000542930 MTURNQ8N3F0 131 aa4.48□□□□□ -1.69
C2CD3-219ENST00000542930 HIST1H2BHQ93079 126 aa4.48□□□□□ -1.69
C2CD3-219ENST00000542930 HIST1H2BNQ99877 126 aa4.48□□□□□ -1.69
C2CD3-219ENST00000542930 HIST1H2BMQ99879 126 aa4.48□□□□□ -1.69
C2CD3-219ENST00000542930 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.7
C2CD3-219ENST00000542930 LINC01545Q5VT33 79 aa4.46□□□□□ -1.7
C2CD3-219ENST00000542930 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
C2CD3-219ENST00000542930 A4D1N5 150 aa4.45□□□□□ -1.7
C2CD3-219ENST00000542930 A6NN06 94 aa4.45□□□□□ -1.7
C2CD3-219ENST00000542930 ZNF815PA8K554 130 aa4.45□□□□□ -1.7
C2CD3-219ENST00000542930 NHP2Q9NX24 153 aaKnown RBP4.45□□□□□ -1.7
C2CD3-219ENST00000542930 TRAV13-2A0A0B4J235 113 aa4.44□□□□□ -1.7
C2CD3-219ENST00000542930 TIMM17BO60830 172 aa4.44□□□□□ -1.7
C2CD3-219ENST00000542930 GHRHP01286 108 aa4.43□□□□□ -1.7
C2CD3-219ENST00000542930 C3orf79P0CE67 100 aa4.43□□□□□ -1.7
C2CD3-219ENST00000542930 DSCR10P59022 87 aa4.42□□□□□ -1.7
C2CD3-219ENST00000542930 OCIAD2Q56VL3 154 aa4.42□□□□□ -1.7
C2CD3-219ENST00000542930 PET117Q6UWS5 81 aa4.42□□□□□ -1.7
C2CD3-219ENST00000542930 ANKRD39Q53RE8 183 aa4.41□□□□□ -1.7
C2CD3-219ENST00000542930 SS18L2Q9UHA2 77 aa4.41□□□□□ -1.7
C2CD3-219ENST00000542930 KRTDAPP60985 99 aa4.4□□□□□ -1.71
C2CD3-219ENST00000542930 COA6Q5JTJ3 125 aaKnown RBP4.4□□□□□ -1.71
C2CD3-219ENST00000542930 ATOH7Q8N100 152 aa4.4□□□□□ -1.71
C2CD3-219ENST00000542930 A6NDN8 102 aa4.38□□□□□ -1.71
C2CD3-219ENST00000542930 LINC00313P59037 77 aa4.37□□□□□ -1.71
C2CD3-219ENST00000542930 SCGB1D4Q6XE38 83 aa4.37□□□□□ -1.71
C2CD3-219ENST00000542930 Q6ZQY7 126 aa4.37□□□□□ -1.71
C2CD3-219ENST00000542930 MUSTN1Q8IVN3 82 aa4.36□□□□□ -1.71
C2CD3-219ENST00000542930 LINC00575Q6W349 94 aa4.35□□□□□ -1.71
C2CD3-219ENST00000542930 SMIM11BQ8TCY0 68 aa4.35□□□□□ -1.71
C2CD3-219ENST00000542930 KRTAP2-2Q9BYT5 123 aa4.35□□□□□ -1.71
C2CD3-219ENST00000542930 KRTAP2-1Q9BYU5 128 aa4.35□□□□□ -1.71
C2CD3-219ENST00000542930 SCGB1D1O95968 90 aa4.34□□□□□ -1.71
C2CD3-219ENST00000542930 hADV29S1A0JD25 119 aa4.33□□□□□ -1.72
C2CD3-219ENST00000542930 H3BUT2 72 aa4.33□□□□□ -1.72
C2CD3-219ENST00000542930 IFITM1P13164 125 aa4.33□□□□□ -1.72
C2CD3-219ENST00000542930 VAMP3Q15836 100 aa4.33□□□□□ -1.72
C2CD3-219ENST00000542930 COPS9Q8WXC6 57 aa4.33□□□□□ -1.72
C2CD3-219ENST00000542930 A0A087WSZ3 146 aa4.32□□□□□ -1.72
C2CD3-219ENST00000542930 SPINK7P58062 85 aa4.32□□□□□ -1.72
C2CD3-219ENST00000542930 TEN1Q86WV5 123 aa4.32□□□□□ -1.72
C2CD3-219ENST00000542930 PPDPFLQ8WWR9 84 aa4.32□□□□□ -1.72
C2CD3-219ENST00000542930 SIGMAR1Q99720 223 aa4.32□□□□□ -1.72
C2CD3-219ENST00000542930 MT1BP07438 61 aa4.31□□□□□ -1.72
C2CD3-219ENST00000542930 KRTAP10-5P60370 271 aa4.31□□□□□ -1.72
C2CD3-219ENST00000542930 HIST3H2BBQ8N257 126 aa4.31□□□□□ -1.72
C2CD3-219ENST00000542930 SNHG12Q9BXW3 62 aa4.31□□□□□ -1.72
C2CD3-219ENST00000542930 HIST1H2BLQ99880 126 aa4.3□□□□□ -1.72
C2CD3-219ENST00000542930 GPR98Q8WXG9 6306 aa4.3□□□□□ -1.72
C2CD3-219ENST00000542930 SPRR2EP22531 72 aa4.29□□□□□ -1.72
C2CD3-219ENST00000542930 SPRR2BP35325 72 aa4.29□□□□□ -1.72
C2CD3-219ENST00000542930 SPRR2AP35326 72 aa4.29□□□□□ -1.72
C2CD3-219ENST00000542930 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.29□□□□□ -1.72
C2CD3-219ENST00000542930 FAM218AQ96MZ4 157 aa4.29□□□□□ -1.72
C2CD3-219ENST00000542930 A0A1W2PNM2 257 aa4.28□□□□□ -1.72
C2CD3-219ENST00000542930 Q5VV11 94 aa4.28□□□□□ -1.72
C2CD3-219ENST00000542930 SNRPEP62304 92 aaKnown RBP4.27□□□□□ -1.73
C2CD3-219ENST00000542930 WFDC13Q8IUB5 93 aa4.27□□□□□ -1.73
C2CD3-219ENST00000542930 TMEM238LA0A1B0GVL6 79 aa4.26□□□□□ -1.73
C2CD3-219ENST00000542930 IGKV4-1P06312 121 aa4.26□□□□□ -1.73
C2CD3-219ENST00000542930 ZCCHC13Q8WW36 166 aaKnown RBP4.26□□□□□ -1.73
C2CD3-219ENST00000542930 C12orf57Q99622 126 aa4.26□□□□□ -1.73
C2CD3-219ENST00000542930 SPRR2FQ96RM1 72 aa4.24□□□□□ -1.73
C2CD3-219ENST00000542930 S100A2P29034 98 aa4.23□□□□□ -1.73
C2CD3-219ENST00000542930 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
C2CD3-219ENST00000542930 IGHV6-1A0A0B4J1U7 121 aa4.22□□□□□ -1.73
C2CD3-219ENST00000542930 HSBP1L1C9JCN9 74 aa4.22□□□□□ -1.73
C2CD3-219ENST00000542930 COX8AP10176 69 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms