RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 COL7A1Q02388 2944 aa4.13□□□□□ -1.75
PTPRO-208ENST00000542557 Q5XG85 94 aa4.13□□□□□ -1.75
PTPRO-208ENST00000542557 SMIM29Q86T20 159 aa4.13□□□□□ -1.75
PTPRO-208ENST00000542557 IGKV2-24A0A0C4DH68 120 aa4.13□□□□□ -1.75
PTPRO-208ENST00000542557 LYSTQ99698 3801 aa4.13□□□□□ -1.75
PTPRO-208ENST00000542557 VPS13DQ5THJ4 4388 aa4.12□□□□□ -1.75
PTPRO-208ENST00000542557 IGLV8-61A0A075B6I0 122 aa4.12□□□□□ -1.75
PTPRO-208ENST00000542557 NUPR2A6NF83 97 aa4.12□□□□□ -1.75
PTPRO-208ENST00000542557 F8WEM9 126 aa4.12□□□□□ -1.75
PTPRO-208ENST00000542557 DPH3Q96FX2 82 aa4.12□□□□□ -1.75
PTPRO-208ENST00000542557 C8orf87E5RJ46 101 aa4.11□□□□□ -1.75
PTPRO-208ENST00000542557 H0Y9J4 135 aa4.11□□□□□ -1.75
PTPRO-208ENST00000542557 Q8N9L7 120 aa4.11□□□□□ -1.75
PTPRO-208ENST00000542557 LINC00476Q8WZB0 136 aa4.11□□□□□ -1.75
PTPRO-208ENST00000542557 NBDYA0A0U1RRE5 68 aa4.11□□□□□ -1.75
PTPRO-208ENST00000542557 H7BZZ5 65 aa4.11□□□□□ -1.75
PTPRO-208ENST00000542557 C9orf163Q8N9P6 203 aa4.11□□□□□ -1.75
PTPRO-208ENST00000542557 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.11□□□□□ -1.75
PTPRO-208ENST00000542557 LRCOL1A6NCL2 159 aa4.11□□□□□ -1.75
PTPRO-208ENST00000542557 CDK2AP2O75956 126 aa4.11□□□□□ -1.75
PTPRO-208ENST00000542557 NDUFC1O43677 76 aa4.1□□□□□ -1.75
PTPRO-208ENST00000542557 PRLHP81277 87 aa4.1□□□□□ -1.75
PTPRO-208ENST00000542557 HRCT1Q6UXD1 115 aa4.1□□□□□ -1.75
PTPRO-208ENST00000542557 OCR1Q9BZK8 76 aa4.1□□□□□ -1.75
PTPRO-208ENST00000542557 LINC00474Q9P2X8 69 aa4.1□□□□□ -1.75
PTPRO-208ENST00000542557 SPRR1BP22528 89 aa4.1□□□□□ -1.75
PTPRO-208ENST00000542557 Q6ZRN7 208 aaPredicted RBP4.1□□□□□ -1.75
PTPRO-208ENST00000542557 IGFL1Q6UW32 110 aa4.09□□□□□ -1.75
PTPRO-208ENST00000542557 NOTCH2NLQ7Z3S9 236 aa4.09□□□□□ -1.75
PTPRO-208ENST00000542557 CHTF8P0CG12 524 aa4.09□□□□□ -1.75
PTPRO-208ENST00000542557 PHF5AQ7RTV0 110 aaKnown RBP4.09□□□□□ -1.75
PTPRO-208ENST00000542557 HIGD2AQ9BW72 106 aa4.09□□□□□ -1.75
PTPRO-208ENST00000542557 CSMD3Q7Z407 3707 aa4.08□□□□□ -1.76
PTPRO-208ENST00000542557 DSCR10P59022 87 aa4.08□□□□□ -1.76
PTPRO-208ENST00000542557 TMEM254Q8TBM7 123 aa4.08□□□□□ -1.76
PTPRO-208ENST00000542557 EPM2AB3EWF7 344 aa4.08□□□□□ -1.76
PTPRO-208ENST00000542557 KRTAP11-1Q8IUC1 163 aa4.08□□□□□ -1.76
PTPRO-208ENST00000542557 SNURFQ9Y675 71 aa4.08□□□□□ -1.76
PTPRO-208ENST00000542557 DNAH7Q8WXX0 4024 aa4.07□□□□□ -1.76
PTPRO-208ENST00000542557 UBE2AP49459 152 aa4.07□□□□□ -1.76
PTPRO-208ENST00000542557 STARD9Q9P2P6 4700 aa4.07□□□□□ -1.76
PTPRO-208ENST00000542557 ATP5EP56381 51 aaPredicted RBP4.07□□□□□ -1.76
PTPRO-208ENST00000542557 DNAH17Q9UFH2 4485 aa4.06□□□□□ -1.76
PTPRO-208ENST00000542557 RBM12B-AS1Q9P1G2 102 aa4.06□□□□□ -1.76
PTPRO-208ENST00000542557 LCE6AA0A183 80 aa4.06□□□□□ -1.76
PTPRO-208ENST00000542557 FAM229AH3BQW9 127 aa4.06□□□□□ -1.76
PTPRO-208ENST00000542557 KRTAP13-1Q8IUC0 172 aa4.06□□□□□ -1.76
PTPRO-208ENST00000542557 PRKDCP78527 4128 aaKnown RBP4.05□□□□□ -1.76
PTPRO-208ENST00000542557 K7EQZ3 153 aa4.05□□□□□ -1.76
PTPRO-208ENST00000542557 SERP1Q9Y6X1 66 aa4.05□□□□□ -1.76
PTPRO-208ENST00000542557 PRR15Q8IV56 129 aa4.05□□□□□ -1.76
PTPRO-208ENST00000542557 SPACA4Q8TDM5 124 aa4.05□□□□□ -1.76
PTPRO-208ENST00000542557 A0A087WSZ3 146 aa4.05□□□□□ -1.76
PTPRO-208ENST00000542557 PANO1I0J062 215 aa4.04□□□□□ -1.76
PTPRO-208ENST00000542557 DNAH2Q9P225 4427 aa4.04□□□□□ -1.76
PTPRO-208ENST00000542557 HCG22E2RYF7 251 aa4.04□□□□□ -1.76
PTPRO-208ENST00000542557 A0A0G2JQZ4 141 aa4.03□□□□□ -1.76
PTPRO-208ENST00000542557 TENM2Q9NT68 2774 aa4.03□□□□□ -1.76
PTPRO-208ENST00000542557 A0A087WTM6 91 aa4.03□□□□□ -1.76
PTPRO-208ENST00000542557 NDUFS5O43920 106 aa4.03□□□□□ -1.76
PTPRO-208ENST00000542557 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.02□□□□□ -1.77
PTPRO-208ENST00000542557 Q6ZR54 194 aa4.01□□□□□ -1.77
PTPRO-208ENST00000542557 DNAH8Q96JB1 4490 aa4.01□□□□□ -1.77
PTPRO-208ENST00000542557 IGLV9-49A0A0B4J1Y8 123 aa4.01□□□□□ -1.77
PTPRO-208ENST00000542557 RPL37AP61513 92 aaKnown RBP4.01□□□□□ -1.77
PTPRO-208ENST00000542557 LINC00483Q53H64 154 aa4.01□□□□□ -1.77
PTPRO-208ENST00000542557 LINC00472Q9H8W2 130 aa4.01□□□□□ -1.77
PTPRO-208ENST00000542557 ZCCHC13Q8WW36 166 aaKnown RBP4□□□□□ -1.77
PTPRO-208ENST00000542557 RTL8CO15255 209 aa4□□□□□ -1.77
PTPRO-208ENST00000542557 LCE2AQ5TA79 106 aaPredicted RBP4□□□□□ -1.77
PTPRO-208ENST00000542557 A8MWP4 228 aa3.99□□□□□ -1.77
PTPRO-208ENST00000542557 KRTAP29-1A8MX34 341 aaPredicted RBP3.99□□□□□ -1.77
PTPRO-208ENST00000542557 PSPHP1O15172 72 aa3.99□□□□□ -1.77
PTPRO-208ENST00000542557 ZNF706Q9Y5V0 76 aaPredicted RBP3.99□□□□□ -1.77
PTPRO-208ENST00000542557 DEFB116Q30KQ4 102 aa3.99□□□□□ -1.77
PTPRO-208ENST00000542557 PLAC8Q9NZF1 115 aa3.99□□□□□ -1.77
PTPRO-208ENST00000542557 HECTD4Q9Y4D8 3996 aa3.98□□□□□ -1.77
PTPRO-208ENST00000542557 DNHD1Q96M86 4753 aa3.98□□□□□ -1.77
PTPRO-208ENST00000542557 SMIM26A0A096LP01 95 aa3.98□□□□□ -1.77
PTPRO-208ENST00000542557 IGLV5-52A0A0A0MRZ9 124 aa3.98□□□□□ -1.77
PTPRO-208ENST00000542557 WFDC13Q8IUB5 93 aa3.98□□□□□ -1.77
PTPRO-208ENST00000542557 DNAH6Q9C0G6 4158 aa3.97□□□□□ -1.77
PTPRO-208ENST00000542557 SRRM2Q9UQ35 2752 aaKnown RBP3.97□□□□□ -1.77
PTPRO-208ENST00000542557 MEGF8Q7Z7M0 2845 aa3.97□□□□□ -1.77
PTPRO-208ENST00000542557 KTN1-AS1Q86SY8 53 aa3.97□□□□□ -1.77
PTPRO-208ENST00000542557 PSORS1C2Q9UIG4 136 aa3.97□□□□□ -1.77
PTPRO-208ENST00000542557 CASC2Q6XLA1 102 aa3.96□□□□□ -1.78
PTPRO-208ENST00000542557 H3BPC8 53 aa3.95□□□□□ -1.78
PTPRO-208ENST00000542557 ZNF861PO60384 105 aa3.95□□□□□ -1.78
PTPRO-208ENST00000542557 MP68P56378 58 aa3.95□□□□□ -1.78
PTPRO-208ENST00000542557 C1orf134Q5TEV5 83 aa3.95□□□□□ -1.78
PTPRO-208ENST00000542557 WWC2-AS2Q96NR7 200 aa3.95□□□□□ -1.78
PTPRO-208ENST00000542557 NDUFB1O75438 58 aa3.95□□□□□ -1.78
PTPRO-208ENST00000542557 KMT2AQ03164 3969 aa3.95□□□□□ -1.78
PTPRO-208ENST00000542557 FP248Q71RG6 208 aaPredicted RBP3.94□□□□□ -1.78
PTPRO-208ENST00000542557 Q96NJ1 140 aa3.94□□□□□ -1.78
PTPRO-208ENST00000542557 DNAH5Q8TE73 4624 aa3.94□□□□□ -1.78
PTPRO-208ENST00000542557 MMP24-AS1A0A0U1RRL7 71 aa3.94□□□□□ -1.78
PTPRO-208ENST00000542557 DNAH11Q96DT5 4516 aa3.94□□□□□ -1.78
PTPRO-208ENST00000542557 CYP4F30PQ9H0H9 118 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms