RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 SPRR1BP22528 89 aa10.74□□□□□ -0.69
RAB6A-208ENST00000541795 Q6ZQT0 140 aa10.74□□□□□ -0.69
RAB6A-208ENST00000541795 TRBV7-4A0A0J9YYF1 115 aa10.73□□□□□ -0.69
RAB6A-208ENST00000541795 CCKP06307 115 aa10.73□□□□□ -0.69
RAB6A-208ENST00000541795 XGP55808 180 aa10.73□□□□□ -0.69
RAB6A-208ENST00000541795 SPRR4Q96PI1 79 aa10.72□□□□□ -0.69
RAB6A-208ENST00000541795 ZNF706Q9Y5V0 76 aaPredicted RBP10.72□□□□□ -0.69
RAB6A-208ENST00000541795 F8WEM9 126 aa10.72□□□□□ -0.69
RAB6A-208ENST00000541795 PDE6GP18545 87 aa10.72□□□□□ -0.69
RAB6A-208ENST00000541795 ACYP1P07311 99 aa10.7□□□□□ -0.7
RAB6A-208ENST00000541795 SCGB1A1P11684 91 aa10.68□□□□□ -0.7
RAB6A-208ENST00000541795 CDIP1Q9H305 208 aa10.68□□□□□ -0.7
RAB6A-208ENST00000541795 VPS13BQ7Z7G8 4022 aa10.68□□□□□ -0.7
RAB6A-208ENST00000541795 LINC00483Q53H64 154 aa10.68□□□□□ -0.7
RAB6A-208ENST00000541795 APOBP04114 4563 aaKnown RBP10.67□□□□□ -0.7
RAB6A-208ENST00000541795 RPL37AP61513 92 aaKnown RBP10.65□□□□□ -0.71
RAB6A-208ENST00000541795 IGLV8-61A0A075B6I0 122 aa10.64□□□□□ -0.71
RAB6A-208ENST00000541795 SMR3BP02814 79 aaPredicted RBP10.64□□□□□ -0.71
RAB6A-208ENST00000541795 LINC00846Q9NV44 126 aa10.62□□□□□ -0.71
RAB6A-208ENST00000541795 SIGMAR1Q99720 223 aa10.61□□□□□ -0.71
RAB6A-208ENST00000541795 IGFL1Q6UW32 110 aa10.61□□□□□ -0.71
RAB6A-208ENST00000541795 ANAPC11Q9NYG5 84 aa10.61□□□□□ -0.71
RAB6A-208ENST00000541795 IGLV9-49A0A0B4J1Y8 123 aa10.59□□□□□ -0.71
RAB6A-208ENST00000541795 A0A1W2PNM2 257 aa10.58□□□□□ -0.72
RAB6A-208ENST00000541795 Q6JHZ5 121 aa10.58□□□□□ -0.72
RAB6A-208ENST00000541795 C9orf153Q5TBE3 101 aa10.58□□□□□ -0.72
RAB6A-208ENST00000541795 Q8NBF4 154 aa10.58□□□□□ -0.72
RAB6A-208ENST00000541795 A0A0G2JQZ4 141 aa10.57□□□□□ -0.72
RAB6A-208ENST00000541795 MOBPQ13875 183 aa10.54□□□□□ -0.72
RAB6A-208ENST00000541795 UBL5Q9BZL1 73 aa10.54□□□□□ -0.72
RAB6A-208ENST00000541795 A0A1B0GW54 56 aa10.52□□□□□ -0.73
RAB6A-208ENST00000541795 CDK2AP2O75956 126 aa10.52□□□□□ -0.73
RAB6A-208ENST00000541795 SPINK6Q6UWN8 80 aa10.52□□□□□ -0.73
RAB6A-208ENST00000541795 LINC00643Q86TS7 51 aa10.52□□□□□ -0.73
RAB6A-208ENST00000541795 MT-ATP8P03928 68 aa10.51□□□□□ -0.73
RAB6A-208ENST00000541795 CRYGAP11844 174 aa10.51□□□□□ -0.73
RAB6A-208ENST00000541795 KRTAP10-4P60372 401 aaPredicted RBP10.5□□□□□ -0.73
RAB6A-208ENST00000541795 FAT1Q14517 4588 aa10.49□□□□□ -0.73
RAB6A-208ENST00000541795 KRTAP1-4P0C5Y4 121 aa10.49□□□□□ -0.73
RAB6A-208ENST00000541795 Q6ZVQ6 151 aa10.49□□□□□ -0.73
RAB6A-208ENST00000541795 FAM229BQ4G0N7 80 aa10.48□□□□□ -0.73
RAB6A-208ENST00000541795 Q6Q795 121 aa10.47□□□□□ -0.73
RAB6A-208ENST00000541795 A0A087X002 238 aa10.46□□□□□ -0.74
RAB6A-208ENST00000541795 FAM229AH3BQW9 127 aa10.45□□□□□ -0.74
RAB6A-208ENST00000541795 HSPG2P98160 4391 aa10.45□□□□□ -0.74
RAB6A-208ENST00000541795 PLA2G1BP04054 148 aaKnown RBP10.44□□□□□ -0.74
RAB6A-208ENST00000541795 NREPQ16612 68 aa10.44□□□□□ -0.74
RAB6A-208ENST00000541795 A0A087WSZ3 146 aa10.44□□□□□ -0.74
RAB6A-208ENST00000541795 IGKV3D-7A0A0C4DH55 119 aa10.42□□□□□ -0.74
RAB6A-208ENST00000541795 TRBV7-7A0A0K0K1E9 115 aa10.42□□□□□ -0.74
RAB6A-208ENST00000541795 KRTAP13-2Q52LG2 175 aa10.42□□□□□ -0.74
RAB6A-208ENST00000541795 ATP5EP2Q5VTU8 51 aa10.42□□□□□ -0.74
RAB6A-208ENST00000541795 SSBP3-AS1Q7Z2R9 100 aa10.42□□□□□ -0.74
RAB6A-208ENST00000541795 HRCT1Q6UXD1 115 aa10.4□□□□□ -0.74
RAB6A-208ENST00000541795 Q5VSD8 79 aa10.4□□□□□ -0.75
RAB6A-208ENST00000541795 EPPK1P58107 5090 aaKnown RBP10.39□□□□□ -0.75
RAB6A-208ENST00000541795 RYR1P21817 5038 aa10.39□□□□□ -0.75
RAB6A-208ENST00000541795 PKHD1L1Q86WI1 4243 aa10.35□□□□□ -0.75
RAB6A-208ENST00000541795 CXCL6P80162 114 aa10.35□□□□□ -0.75
RAB6A-208ENST00000541795 IMUPQ9GZP8 106 aa10.35□□□□□ -0.75
RAB6A-208ENST00000541795 BPY2O14599 106 aa10.34□□□□□ -0.75
RAB6A-208ENST00000541795 CD164Q04900 197 aa10.34□□□□□ -0.75
RAB6A-208ENST00000541795 TYMSOSQ8TAI1 123 aa10.33□□□□□ -0.76
RAB6A-208ENST00000541795 PRR26Q8N8Z3 221 aa10.32□□□□□ -0.76
RAB6A-208ENST00000541795 SS18L2Q9UHA2 77 aa10.31□□□□□ -0.76
RAB6A-208ENST00000541795 HIST1H4AP62805 103 aaKnown RBP10.3□□□□□ -0.76
RAB6A-208ENST00000541795 KIAA1109Q2LD37 5005 aa10.29□□□□□ -0.76
RAB6A-208ENST00000541795 KRTAP17-1Q9BYP8 105 aa10.28□□□□□ -0.76
RAB6A-208ENST00000541795 DEFB116Q30KQ4 102 aa10.28□□□□□ -0.76
RAB6A-208ENST00000541795 Q8N1X5 172 aa10.28□□□□□ -0.76
RAB6A-208ENST00000541795 LINC00472Q9H8W2 130 aa10.27□□□□□ -0.77
RAB6A-208ENST00000541795 A0A087WVE0 104 aa10.26□□□□□ -0.77
RAB6A-208ENST00000541795 Q8N9L7 120 aa10.24□□□□□ -0.77
RAB6A-208ENST00000541795 DSCR10P59022 87 aa10.23□□□□□ -0.77
RAB6A-208ENST00000541795 C4orf48Q5BLP8 95 aa10.23□□□□□ -0.77
RAB6A-208ENST00000541795 Q96NJ1 140 aa10.23□□□□□ -0.77
RAB6A-208ENST00000541795 IGKV4-1P06312 121 aa10.22□□□□□ -0.77
RAB6A-208ENST00000541795 FAM236AA0A1B0GUQ0 79 aa10.21□□□□□ -0.78
RAB6A-208ENST00000541795 FAM236BA0A1B0GV22 79 aa10.21□□□□□ -0.78
RAB6A-208ENST00000541795 LINC00304Q8N9R0 145 aa10.21□□□□□ -0.78
RAB6A-208ENST00000541795 ANAPC13Q9BS18 74 aa10.2□□□□□ -0.78
RAB6A-208ENST00000541795 J3KT08 172 aa10.19□□□□□ -0.78
RAB6A-208ENST00000541795 K7EQZ3 153 aa10.19□□□□□ -0.78
RAB6A-208ENST00000541795 SPINK1P00995 79 aa10.19□□□□□ -0.78
RAB6A-208ENST00000541795 LIMD2Q9BT23 127 aa10.19□□□□□ -0.78
RAB6A-208ENST00000541795 ASB16-AS1Q495Z4 193 aa10.18□□□□□ -0.78
RAB6A-208ENST00000541795 Q5XG85 94 aa10.18□□□□□ -0.78
RAB6A-208ENST00000541795 SPAG11AQ6PDA7 123 aa10.17□□□□□ -0.78
RAB6A-208ENST00000541795 A8MWP4 228 aa10.16□□□□□ -0.78
RAB6A-208ENST00000541795 SVIPQ8NHG7 77 aa10.14□□□□□ -0.79
RAB6A-208ENST00000541795 RPS29P62273 56 aaKnown RBP10.12□□□□□ -0.79
RAB6A-208ENST00000541795 PRR15Q8IV56 129 aa10.12□□□□□ -0.79
RAB6A-208ENST00000541795 NDUFB1O75438 58 aa10.11□□□□□ -0.79
RAB6A-208ENST00000541795 C1orf195Q5TG92 126 aa10.1□□□□□ -0.79
RAB6A-208ENST00000541795 LRP1Q07954 4544 aaKnown RBP10.09□□□□□ -0.79
RAB6A-208ENST00000541795 KRTAP10-8P60410 259 aa10.08□□□□□ -0.8
RAB6A-208ENST00000541795 FAT3Q8TDW7 4589 aa10.07□□□□□ -0.8
RAB6A-208ENST00000541795 TNXBP22105 4242 aa10.06□□□□□ -0.8
RAB6A-208ENST00000541795 HCG22E2RYF7 251 aa10.06□□□□□ -0.8
RAB6A-208ENST00000541795 ATOX1O00244 68 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms