RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 RETNQ9HD89 108 aa4.38□□□□□ -1.71
EPHA4-214ENST00000541600 DEFB131BA0A096LNP1 70 aa4.37□□□□□ -1.71
EPHA4-214ENST00000541600 A0A1B0GW54 56 aa4.37□□□□□ -1.71
EPHA4-214ENST00000541600 SERP2Q8N6R1 65 aa4.37□□□□□ -1.71
EPHA4-214ENST00000541600 C11orf45Q8TAV5 145 aa4.37□□□□□ -1.71
EPHA4-214ENST00000541600 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
EPHA4-214ENST00000541600 KCNQ1DNQ9H478 68 aa4.37□□□□□ -1.71
EPHA4-214ENST00000541600 MYCBP2O75592 4640 aa4.37□□□□□ -1.71
EPHA4-214ENST00000541600 HMCN2Q8NDA2 5059 aa4.37□□□□□ -1.71
EPHA4-214ENST00000541600 TRAV10A0A0B4J240 114 aa4.36□□□□□ -1.71
EPHA4-214ENST00000541600 IGKV3D-7A0A0C4DH55 119 aa4.36□□□□□ -1.71
EPHA4-214ENST00000541600 CXCL6P80162 114 aa4.36□□□□□ -1.71
EPHA4-214ENST00000541600 SYCNQ0VAF6 134 aa4.36□□□□□ -1.71
EPHA4-214ENST00000541600 C4orf26Q17RF5 130 aa4.36□□□□□ -1.71
EPHA4-214ENST00000541600 Q6ZQY7 126 aa4.36□□□□□ -1.71
EPHA4-214ENST00000541600 DSCR8Q96T75 97 aa4.36□□□□□ -1.71
EPHA4-214ENST00000541600 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
EPHA4-214ENST00000541600 HRCT1Q6UXD1 115 aa4.35□□□□□ -1.71
EPHA4-214ENST00000541600 RMI2Q96E14 147 aa4.35□□□□□ -1.71
EPHA4-214ENST00000541600 TM2D3Q9BRN9 247 aa4.35□□□□□ -1.71
EPHA4-214ENST00000541600 XAGE1AQ9HD64 81 aa4.35□□□□□ -1.71
EPHA4-214ENST00000541600 SPRR1AP35321 89 aa4.34□□□□□ -1.71
EPHA4-214ENST00000541600 HIGD2BQ4VC39 106 aa4.34□□□□□ -1.71
EPHA4-214ENST00000541600 Q6ZRP5 223 aa4.34□□□□□ -1.71
EPHA4-214ENST00000541600 LAMTOR3Q9UHA4 124 aa4.34□□□□□ -1.71
EPHA4-214ENST00000541600 LRP1BQ9NZR2 4599 aa4.33□□□□□ -1.72
EPHA4-214ENST00000541600 KRTAP4-16G5E9R7 235 aaPredicted RBP4.33□□□□□ -1.72
EPHA4-214ENST00000541600 CYSTM1Q9H1C7 97 aa4.33□□□□□ -1.72
EPHA4-214ENST00000541600 DNAH6Q9C0G6 4158 aa4.32□□□□□ -1.72
EPHA4-214ENST00000541600 IGLV5-48A0A075B6I7 105 aa4.32□□□□□ -1.72
EPHA4-214ENST00000541600 IGKV2D-24A0A075B6R9 120 aa4.32□□□□□ -1.72
EPHA4-214ENST00000541600 LINC01547P58512 204 aaPredicted RBP4.32□□□□□ -1.72
EPHA4-214ENST00000541600 DHRS4-AS1Q9P1J3 65 aa4.32□□□□□ -1.72
EPHA4-214ENST00000541600 SERP1Q9Y6X1 66 aa4.32□□□□□ -1.72
EPHA4-214ENST00000541600 RNF213Q63HN8 5207 aa4.31□□□□□ -1.72
EPHA4-214ENST00000541600 TRAV7A0A075B6U4 112 aa4.31□□□□□ -1.72
EPHA4-214ENST00000541600 CD164Q04900 197 aa4.31□□□□□ -1.72
EPHA4-214ENST00000541600 SMIM29Q86T20 159 aa4.31□□□□□ -1.72
EPHA4-214ENST00000541600 C7orf33Q8WU49 177 aa4.31□□□□□ -1.72
EPHA4-214ENST00000541600 LINC00588Q9Y4M8 146 aa4.31□□□□□ -1.72
EPHA4-214ENST00000541600 IGLV1-50A0A075B6I6 118 aa4.3□□□□□ -1.72
EPHA4-214ENST00000541600 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
EPHA4-214ENST00000541600 FAM19A1Q7Z5A9 133 aa4.3□□□□□ -1.72
EPHA4-214ENST00000541600 NKAPP1Q8N9T2 125 aa4.3□□□□□ -1.72
EPHA4-214ENST00000541600 DNAH5Q8TE73 4624 aa4.3□□□□□ -1.72
EPHA4-214ENST00000541600 A0A087WVE0 104 aa4.29□□□□□ -1.72
EPHA4-214ENST00000541600 M0R2N4 97 aa4.29□□□□□ -1.72
EPHA4-214ENST00000541600 Q6ZRX8 168 aa4.29□□□□□ -1.72
EPHA4-214ENST00000541600 Q8N377 158 aa4.29□□□□□ -1.72
EPHA4-214ENST00000541600 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
EPHA4-214ENST00000541600 ERC2-IT1O76042 136 aa4.28□□□□□ -1.72
EPHA4-214ENST00000541600 SMIM26A0A096LP01 95 aa4.27□□□□□ -1.73
EPHA4-214ENST00000541600 FAM236DA0A1B0GTK5 79 aa4.27□□□□□ -1.73
EPHA4-214ENST00000541600 FAM236CP0DP71 79 aa4.27□□□□□ -1.73
EPHA4-214ENST00000541600 CNBPP62633 177 aaKnown RBP4.27□□□□□ -1.73
EPHA4-214ENST00000541600 KRTAP7-1Q8IUC3 87 aa4.27□□□□□ -1.73
EPHA4-214ENST00000541600 FAT1Q14517 4588 aa4.27□□□□□ -1.73
EPHA4-214ENST00000541600 IGKV2-30P06310 120 aa4.26□□□□□ -1.73
EPHA4-214ENST00000541600 ATP5EP56381 51 aaPredicted RBP4.26□□□□□ -1.73
EPHA4-214ENST00000541600 HAMPP81172 84 aa4.26□□□□□ -1.73
EPHA4-214ENST00000541600 KLKP1Q107X0 134 aa4.26□□□□□ -1.73
EPHA4-214ENST00000541600 SPRR4Q96PI1 79 aa4.26□□□□□ -1.73
EPHA4-214ENST00000541600 C1orf195Q5TG92 126 aa4.25□□□□□ -1.73
EPHA4-214ENST00000541600 Q9BRP9 147 aa4.25□□□□□ -1.73
EPHA4-214ENST00000541600 PKIGQ9Y2B9 76 aa4.25□□□□□ -1.73
EPHA4-214ENST00000541600 IGLV8-61A0A075B6I0 122 aa4.24□□□□□ -1.73
EPHA4-214ENST00000541600 ETDCA0A1B0GVM5 59 aa4.24□□□□□ -1.73
EPHA4-214ENST00000541600 RPL37AP8A6NKH3 93 aa4.24□□□□□ -1.73
EPHA4-214ENST00000541600 H0Y9J4 135 aa4.24□□□□□ -1.73
EPHA4-214ENST00000541600 NDUFC1O43677 76 aa4.24□□□□□ -1.73
EPHA4-214ENST00000541600 C14orf177Q52M58 125 aa4.24□□□□□ -1.73
EPHA4-214ENST00000541600 MRPL55Q7Z7F7 128 aaKnown RBP4.24□□□□□ -1.73
EPHA4-214ENST00000541600 C16orf90A8MZG2 172 aa4.23□□□□□ -1.73
EPHA4-214ENST00000541600 FUSP35637 526 aaKnown RBP eCLIP4.23□□□□□ -1.73
EPHA4-214ENST00000541600 NREPQ16612 68 aa4.23□□□□□ -1.73
EPHA4-214ENST00000541600 FP248Q71RG6 208 aaPredicted RBP4.23□□□□□ -1.73
EPHA4-214ENST00000541600 Q8NBF4 154 aa4.23□□□□□ -1.73
EPHA4-214ENST00000541600 A0A1W2PNM2 257 aa4.22□□□□□ -1.73
EPHA4-214ENST00000541600 H7BZZ5 65 aa4.22□□□□□ -1.73
EPHA4-214ENST00000541600 IGKV4-1P06312 121 aa4.22□□□□□ -1.73
EPHA4-214ENST00000541600 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
EPHA4-214ENST00000541600 REG3GQ6UW15 175 aa4.22□□□□□ -1.73
EPHA4-214ENST00000541600 APLNQ9ULZ1 77 aa4.22□□□□□ -1.73
EPHA4-214ENST00000541600 FAM168BA1KXE4 195 aa4.21□□□□□ -1.74
EPHA4-214ENST00000541600 BPY2O14599 106 aa4.21□□□□□ -1.74
EPHA4-214ENST00000541600 SPRR1BP22528 89 aa4.21□□□□□ -1.74
EPHA4-214ENST00000541600 C1orf137Q5JT78 98 aa4.2□□□□□ -1.74
EPHA4-214ENST00000541600 C20orf197Q8N268 126 aa4.2□□□□□ -1.74
EPHA4-214ENST00000541600 OCR1Q9BZK8 76 aa4.2□□□□□ -1.74
EPHA4-214ENST00000541600 SRRM2Q9UQ35 2752 aaKnown RBP4.19□□□□□ -1.74
EPHA4-214ENST00000541600 A0A087X002 238 aa4.19□□□□□ -1.74
EPHA4-214ENST00000541600 A0A0U1RQV1 116 aa4.19□□□□□ -1.74
EPHA4-214ENST00000541600 PRR15Q8IV56 129 aa4.18□□□□□ -1.74
EPHA4-214ENST00000541600 C9orf163Q8N9P6 203 aa4.18□□□□□ -1.74
EPHA4-214ENST00000541600 ST20-AS1Q8NBB2 130 aa4.18□□□□□ -1.74
EPHA4-214ENST00000541600 DEFB105AQ8NG35 78 aa4.18□□□□□ -1.74
EPHA4-214ENST00000541600 KRTAP1-5Q9BYS1 174 aa4.18□□□□□ -1.74
EPHA4-214ENST00000541600 VPS13BQ7Z7G8 4022 aa4.18□□□□□ -1.74
EPHA4-214ENST00000541600 DMBT1Q9UGM3 2413 aaPredicted RBP4.17□□□□□ -1.74
EPHA4-214ENST00000541600 A0A096LNI7 61 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms