RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 OCIAD2Q56VL3 154 aa10.13□□□□□ -0.79
LPCAT3-210ENST00000540090 LINC00575Q6W349 94 aa10.13□□□□□ -0.79
LPCAT3-210ENST00000540090 TRBV20-1A0A075B6N2 111 aa10.12□□□□□ -0.79
LPCAT3-210ENST00000540090 KRTAP19-1Q8IUB9 90 aa10.12□□□□□ -0.79
LPCAT3-210ENST00000540090 SLC7A5P1Q8MH63 180 aa10.12□□□□□ -0.79
LPCAT3-210ENST00000540090 C20orf166-AS1Q96NR2 134 aa10.12□□□□□ -0.79
LPCAT3-210ENST00000540090 MT2AP02795 61 aa10.11□□□□□ -0.79
LPCAT3-210ENST00000540090 VAMP3Q15836 100 aa10.11□□□□□ -0.79
LPCAT3-210ENST00000540090 Q6ZQY7 126 aa10.11□□□□□ -0.79
LPCAT3-210ENST00000540090 C3orf79P0CE67 100 aa10.1□□□□□ -0.79
LPCAT3-210ENST00000540090 LST1O00453 97 aa10.09□□□□□ -0.79
LPCAT3-210ENST00000540090 LCE2BO14633 110 aa10.09□□□□□ -0.79
LPCAT3-210ENST00000540090 HIST1H2BKO60814 126 aa10.09□□□□□ -0.79
LPCAT3-210ENST00000540090 HIST1H2BJP06899 126 aa10.09□□□□□ -0.79
LPCAT3-210ENST00000540090 HIST1H2BOP23527 126 aa10.09□□□□□ -0.79
LPCAT3-210ENST00000540090 HIST1H2BBP33778 126 aa10.09□□□□□ -0.79
LPCAT3-210ENST00000540090 HIST1H2BDP58876 126 aa10.09□□□□□ -0.79
LPCAT3-210ENST00000540090 HIST1H2BCP62807 126 aa10.09□□□□□ -0.79
LPCAT3-210ENST00000540090 HIST2H2BEQ16778 126 aa10.09□□□□□ -0.79
LPCAT3-210ENST00000540090 ANKRD39Q53RE8 183 aa10.09□□□□□ -0.79
LPCAT3-210ENST00000540090 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.09□□□□□ -0.79
LPCAT3-210ENST00000540090 HIST1H2BHQ93079 126 aa10.09□□□□□ -0.79
LPCAT3-210ENST00000540090 HIST1H2BNQ99877 126 aa10.09□□□□□ -0.79
LPCAT3-210ENST00000540090 HIST1H2BMQ99879 126 aa10.09□□□□□ -0.79
LPCAT3-210ENST00000540090 hADV29S1A0JD25 119 aa10.08□□□□□ -0.8
LPCAT3-210ENST00000540090 A8MUU9 505 aa10.08□□□□□ -0.8
LPCAT3-210ENST00000540090 KRTAP9-3Q9BYQ3 159 aa10.04□□□□□ -0.8
LPCAT3-210ENST00000540090 MT1FP04733 61 aa10.03□□□□□ -0.8
LPCAT3-210ENST00000540090 KRTDAPP60985 99 aa10.02□□□□□ -0.81
LPCAT3-210ENST00000540090 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.01□□□□□ -0.81
LPCAT3-210ENST00000540090 PPDPFLQ8WWR9 84 aa10□□□□□ -0.81
LPCAT3-210ENST00000540090 SNHG12Q9BXW3 62 aa9.99□□□□□ -0.81
LPCAT3-210ENST00000540090 H3BUT2 72 aa9.98□□□□□ -0.81
LPCAT3-210ENST00000540090 SS18L2Q9UHA2 77 aa9.98□□□□□ -0.81
LPCAT3-210ENST00000540090 MACF1Q9UPN3 7388 aaKnown RBP9.98□□□□□ -0.81
LPCAT3-210ENST00000540090 SCGB1D1O95968 90 aa9.97□□□□□ -0.81
LPCAT3-210ENST00000540090 ATOH7Q8N100 152 aa9.97□□□□□ -0.81
LPCAT3-210ENST00000540090 KRTAP10-10P60014 251 aa9.96□□□□□ -0.82
LPCAT3-210ENST00000540090 FAM236DA0A1B0GTK5 79 aa9.94□□□□□ -0.82
LPCAT3-210ENST00000540090 KRTAP16-1A8MUX0 517 aa9.94□□□□□ -0.82
LPCAT3-210ENST00000540090 FAM236CP0DP71 79 aa9.94□□□□□ -0.82
LPCAT3-210ENST00000540090 COA6Q5JTJ3 125 aaKnown RBP9.93□□□□□ -0.82
LPCAT3-210ENST00000540090 SYNE2Q8WXH0 6885 aaKnown RBP9.92□□□□□ -0.82
LPCAT3-210ENST00000540090 TEN1Q86WV5 123 aa9.91□□□□□ -0.82
LPCAT3-210ENST00000540090 MPLKIPQ8TAP9 179 aa9.91□□□□□ -0.82
LPCAT3-210ENST00000540090 DSCR10P59022 87 aa9.9□□□□□ -0.82
LPCAT3-210ENST00000540090 BVES-AS1Q5T3Y7 98 aa9.89□□□□□ -0.83
LPCAT3-210ENST00000540090 SNRPEP62304 92 aaKnown RBP9.88□□□□□ -0.83
LPCAT3-210ENST00000540090 HRES1P13985 223 aa9.87□□□□□ -0.83
LPCAT3-210ENST00000540090 RBM12B-AS1Q9P1G2 102 aa9.87□□□□□ -0.83
LPCAT3-210ENST00000540090 A0A087WSZ3 146 aa9.86□□□□□ -0.83
LPCAT3-210ENST00000540090 LINC00846Q9NV44 126 aa9.85□□□□□ -0.83
LPCAT3-210ENST00000540090 KRTAP19-6Q3LI70 58 aa9.82□□□□□ -0.84
LPCAT3-210ENST00000540090 C12orf57Q99622 126 aa9.82□□□□□ -0.84
LPCAT3-210ENST00000540090 NDUFV3P56181 108 aaKnown RBP9.81□□□□□ -0.84
LPCAT3-210ENST00000540090 LINC00313P59037 77 aa9.81□□□□□ -0.84
LPCAT3-210ENST00000540090 NOTCH2NLQ7Z3S9 236 aa9.8□□□□□ -0.84
LPCAT3-210ENST00000540090 SIGMAR1Q99720 223 aa9.77□□□□□ -0.85
LPCAT3-210ENST00000540090 SNCGO76070 127 aa9.75□□□□□ -0.85
LPCAT3-210ENST00000540090 H3BMG7 143 aa9.74□□□□□ -0.85
LPCAT3-210ENST00000540090 A0A1W2PNM2 257 aa9.72□□□□□ -0.85
LPCAT3-210ENST00000540090 HSBP1L1C9JCN9 74 aa9.72□□□□□ -0.85
LPCAT3-210ENST00000540090 H0YGX0 51 aa9.71□□□□□ -0.86
LPCAT3-210ENST00000540090 IGKV4-1P06312 121 aa9.71□□□□□ -0.86
LPCAT3-210ENST00000540090 FAM218AQ96MZ4 157 aa9.71□□□□□ -0.86
LPCAT3-210ENST00000540090 HIST1H4GQ99525 98 aa9.71□□□□□ -0.86
LPCAT3-210ENST00000540090 MTURNQ8N3F0 131 aa9.69□□□□□ -0.86
LPCAT3-210ENST00000540090 KRTAP6-3Q3LI67 103 aa9.67□□□□□ -0.86
LPCAT3-210ENST00000540090 GHRHP01286 108 aa9.66□□□□□ -0.86
LPCAT3-210ENST00000540090 FABP2P12104 132 aa9.65□□□□□ -0.86
LPCAT3-210ENST00000540090 TRBV7-4A0A0J9YYF1 115 aa9.63□□□□□ -0.87
LPCAT3-210ENST00000540090 LINC00472Q9H8W2 130 aa9.63□□□□□ -0.87
LPCAT3-210ENST00000540090 A0A1B0GX51 115 aa9.62□□□□□ -0.87
LPCAT3-210ENST00000540090 RAB37Q96AX2 223 aa9.62□□□□□ -0.87
LPCAT3-210ENST00000540090 DEFB116Q30KQ4 102 aa9.61□□□□□ -0.87
LPCAT3-210ENST00000540090 IGHV6-1A0A0B4J1U7 121 aa9.6□□□□□ -0.87
LPCAT3-210ENST00000540090 HIST1H2BLQ99880 126 aa9.6□□□□□ -0.87
LPCAT3-210ENST00000540090 HIST3H2BBQ8N257 126 aa9.59□□□□□ -0.87
LPCAT3-210ENST00000540090 ANKRD29Q8N6D5 301 aa9.59□□□□□ -0.87
LPCAT3-210ENST00000540090 A0A0B4J2C4 111 aa9.58□□□□□ -0.88
LPCAT3-210ENST00000540090 A8MWP4 228 aa9.58□□□□□ -0.88
LPCAT3-210ENST00000540090 COX8AP10176 69 aa9.57□□□□□ -0.88
LPCAT3-210ENST00000540090 SPINK7P58062 85 aa9.56□□□□□ -0.88
LPCAT3-210ENST00000540090 S100A2P29034 98 aa9.55□□□□□ -0.88
LPCAT3-210ENST00000540090 DLEU1O43261 78 aa9.54□□□□□ -0.88
LPCAT3-210ENST00000540090 ZCCHC13Q8WW36 166 aaKnown RBP9.54□□□□□ -0.88
LPCAT3-210ENST00000540090 C8orf87E5RJ46 101 aa9.52□□□□□ -0.89
LPCAT3-210ENST00000540090 Q8N9P0 234 aaPredicted RBP9.51□□□□□ -0.89
LPCAT3-210ENST00000540090 A0A1B0GVX0 72 aa9.49□□□□□ -0.89
LPCAT3-210ENST00000540090 A0A1B0GV72 72 aa9.48□□□□□ -0.89
LPCAT3-210ENST00000540090 TRACP01848 142 aa9.48□□□□□ -0.89
LPCAT3-210ENST00000540090 CCKP06307 115 aa9.48□□□□□ -0.89
LPCAT3-210ENST00000540090 HIGD1BQ9P298 99 aa9.48□□□□□ -0.89
LPCAT3-210ENST00000540090 PRO1854Q9UHT4 67 aa9.47□□□□□ -0.89
LPCAT3-210ENST00000540090 H3BQ85 93 aa9.46□□□□□ -0.9
LPCAT3-210ENST00000540090 ORMDL1Q9P0S3 153 aa9.46□□□□□ -0.9
LPCAT3-210ENST00000540090 TRIAP1O43715 76 aa9.44□□□□□ -0.9
LPCAT3-210ENST00000540090 C14orf144Q96I85 54 aa9.44□□□□□ -0.9
LPCAT3-210ENST00000540090 TMEM256-PLSCR3K7ERE1 68 aa9.43□□□□□ -0.9
LPCAT3-210ENST00000540090 WFDC13Q8IUB5 93 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms