RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 H7BZZ5 65 aa4.51□□□□□ -1.69
LMO3-220ENST00000539232 SPAG11BQ08648 103 aa4.51□□□□□ -1.69
LMO3-220ENST00000539232 KIAA0087Q14695 138 aa4.51□□□□□ -1.69
LMO3-220ENST00000539232 KRTAP7-1Q8IUC3 87 aa4.51□□□□□ -1.69
LMO3-220ENST00000539232 LINC00167Q96N53 147 aa4.51□□□□□ -1.69
LMO3-220ENST00000539232 UBL5Q9BZL1 73 aa4.51□□□□□ -1.69
LMO3-220ENST00000539232 ORMDL1Q9P0S3 153 aa4.51□□□□□ -1.69
LMO3-220ENST00000539232 IGKV3D-7A0A0C4DH55 119 aa4.5□□□□□ -1.69
LMO3-220ENST00000539232 A0A0U1RQV1 116 aa4.5□□□□□ -1.69
LMO3-220ENST00000539232 FAM168BA1KXE4 195 aa4.5□□□□□ -1.69
LMO3-220ENST00000539232 ZNF561-AS1K7EIQ3 104 aa4.5□□□□□ -1.69
LMO3-220ENST00000539232 TMEM256-PLSCR3K7ERE1 68 aa4.5□□□□□ -1.69
LMO3-220ENST00000539232 MT1HL1P0DM35 61 aa4.5□□□□□ -1.69
LMO3-220ENST00000539232 PDE6GP18545 87 aa4.5□□□□□ -1.69
LMO3-220ENST00000539232 C9orf116Q5BN46 136 aaPredicted RBP4.5□□□□□ -1.69
LMO3-220ENST00000539232 ZNF625Q96I27 306 aaPredicted RBP4.5□□□□□ -1.69
LMO3-220ENST00000539232 CAMK2N2Q96S95 79 aa4.5□□□□□ -1.69
LMO3-220ENST00000539232 A0A087WZ39 114 aa4.49□□□□□ -1.69
LMO3-220ENST00000539232 C6orf48Q9UBA6 75 aa4.49□□□□□ -1.69
LMO3-220ENST00000539232 PRR3P79522 188 aaKnown RBP4.48□□□□□ -1.69
LMO3-220ENST00000539232 CXCL6P80162 114 aa4.48□□□□□ -1.69
LMO3-220ENST00000539232 C20orf197Q8N268 126 aa4.48□□□□□ -1.69
LMO3-220ENST00000539232 FAM218AQ96MZ4 157 aa4.48□□□□□ -1.69
LMO3-220ENST00000539232 C14orf132Q9NPU4 83 aa4.48□□□□□ -1.69
LMO3-220ENST00000539232 CDKN2A-AS1Q9UH64 79 aa4.48□□□□□ -1.69
LMO3-220ENST00000539232 SMIM1B2RUZ4 78 aa4.47□□□□□ -1.69
LMO3-220ENST00000539232 C6orf226Q5I0X4 101 aa4.47□□□□□ -1.69
LMO3-220ENST00000539232 LCE2AQ5TA79 106 aaPredicted RBP4.47□□□□□ -1.69
LMO3-220ENST00000539232 SOSTDC1Q6X4U4 206 aa4.47□□□□□ -1.69
LMO3-220ENST00000539232 Q6ZRP5 223 aa4.47□□□□□ -1.69
LMO3-220ENST00000539232 PHF5AQ7RTV0 110 aaKnown RBP4.47□□□□□ -1.69
LMO3-220ENST00000539232 TNXBP22105 4242 aa4.47□□□□□ -1.69
LMO3-220ENST00000539232 A0A087WVE0 104 aa4.46□□□□□ -1.7
LMO3-220ENST00000539232 LOC110117498A0A087WWA1 95 aa4.46□□□□□ -1.7
LMO3-220ENST00000539232 TRBV7-6A0A0J9YX20 115 aa4.46□□□□□ -1.7
LMO3-220ENST00000539232 FP248Q71RG6 208 aaPredicted RBP4.46□□□□□ -1.7
LMO3-220ENST00000539232 PRR15Q8IV56 129 aa4.46□□□□□ -1.7
LMO3-220ENST00000539232 SND1-IT1Q9HBX3 110 aa4.46□□□□□ -1.7
LMO3-220ENST00000539232 FSIP2Q5CZC0 6907 aa4.46□□□□□ -1.7
LMO3-220ENST00000539232 C9orf129Q5T035 196 aaKnown RBP4.45□□□□□ -1.7
LMO3-220ENST00000539232 SMIM11BQ8TCY0 68 aa4.45□□□□□ -1.7
LMO3-220ENST00000539232 RBM3P98179 157 aaKnown RBP4.44□□□□□ -1.7
LMO3-220ENST00000539232 C7orf33Q8WU49 177 aa4.44□□□□□ -1.7
LMO3-220ENST00000539232 TOMM7Q9P0U1 55 aa4.44□□□□□ -1.7
LMO3-220ENST00000539232 PKIGQ9Y2B9 76 aa4.44□□□□□ -1.7
LMO3-220ENST00000539232 IGKV2-28A0A075B6P5 120 aa4.43□□□□□ -1.7
LMO3-220ENST00000539232 TRAV23DV6A0A075B6W5 121 aa4.43□□□□□ -1.7
LMO3-220ENST00000539232 IGKV2D-28P01615 120 aa4.43□□□□□ -1.7
LMO3-220ENST00000539232 MIR7-3HGQ8N6C7 128 aa4.43□□□□□ -1.7
LMO3-220ENST00000539232 LINC00337Q8N6G1 96 aa4.43□□□□□ -1.7
LMO3-220ENST00000539232 XAGE1AQ9HD64 81 aa4.43□□□□□ -1.7
LMO3-220ENST00000539232 LINC00474Q9P2X8 69 aa4.43□□□□□ -1.7
LMO3-220ENST00000539232 PSORS1C2Q9UIG4 136 aa4.43□□□□□ -1.7
LMO3-220ENST00000539232 F8WEM9 126 aa4.42□□□□□ -1.7
LMO3-220ENST00000539232 TLX1NBP0CAT3 122 aa4.42□□□□□ -1.7
LMO3-220ENST00000539232 BRK1Q8WUW1 75 aa4.42□□□□□ -1.7
LMO3-220ENST00000539232 TRBV7-4A0A0J9YYF1 115 aa4.41□□□□□ -1.7
LMO3-220ENST00000539232 NCR3O14931 201 aa4.41□□□□□ -1.7
LMO3-220ENST00000539232 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
LMO3-220ENST00000539232 LCE2DQ5TA82 110 aaPredicted RBP4.41□□□□□ -1.7
LMO3-220ENST00000539232 Q8IZM0 81 aa4.41□□□□□ -1.7
LMO3-220ENST00000539232 COX7B2Q8TF08 81 aa4.41□□□□□ -1.7
LMO3-220ENST00000539232 CD164Q04900 197 aa4.4□□□□□ -1.71
LMO3-220ENST00000539232 Q6ZQT0 140 aa4.4□□□□□ -1.71
LMO3-220ENST00000539232 FAM19A1Q7Z5A9 133 aa4.4□□□□□ -1.71
LMO3-220ENST00000539232 Q8NDZ9 215 aa4.4□□□□□ -1.71
LMO3-220ENST00000539232 LINC01547P58512 204 aaPredicted RBP4.39□□□□□ -1.71
LMO3-220ENST00000539232 KRTAP10-8P60410 259 aa4.39□□□□□ -1.71
LMO3-220ENST00000539232 Q1T7F1 81 aa4.39□□□□□ -1.71
LMO3-220ENST00000539232 C1orf137Q5JT78 98 aa4.39□□□□□ -1.71
LMO3-220ENST00000539232 IGLV7-43P04211 117 aa4.38□□□□□ -1.71
LMO3-220ENST00000539232 LINC00158P58513 81 aa4.38□□□□□ -1.71
LMO3-220ENST00000539232 COX17Q14061 63 aa4.38□□□□□ -1.71
LMO3-220ENST00000539232 SPINK6Q6UWN8 80 aa4.38□□□□□ -1.71
LMO3-220ENST00000539232 TMEM254Q8TBM7 123 aa4.38□□□□□ -1.71
LMO3-220ENST00000539232 A0A1B0GW54 56 aa4.37□□□□□ -1.71
LMO3-220ENST00000539232 Q6ZVQ6 151 aa4.37□□□□□ -1.71
LMO3-220ENST00000539232 A0A0U1RRA0 63 aa4.36□□□□□ -1.71
LMO3-220ENST00000539232 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
LMO3-220ENST00000539232 PRYO14603 147 aa4.36□□□□□ -1.71
LMO3-220ENST00000539232 KRTAP1-4P0C5Y4 121 aa4.36□□□□□ -1.71
LMO3-220ENST00000539232 NREPQ16612 68 aa4.36□□□□□ -1.71
LMO3-220ENST00000539232 PRR26Q8N8Z3 221 aa4.36□□□□□ -1.71
LMO3-220ENST00000539232 RPL37AP8A6NKH3 93 aa4.35□□□□□ -1.71
LMO3-220ENST00000539232 UBE2BP63146 152 aa4.34□□□□□ -1.71
LMO3-220ENST00000539232 LINC00575Q6W349 94 aa4.34□□□□□ -1.71
LMO3-220ENST00000539232 SNURFQ9Y675 71 aa4.34□□□□□ -1.71
LMO3-220ENST00000539232 BPY2O14599 106 aa4.33□□□□□ -1.72
LMO3-220ENST00000539232 ANAPC11Q9NYG5 84 aa4.33□□□□□ -1.72
LMO3-220ENST00000539232 H0Y9J4 135 aa4.32□□□□□ -1.72
LMO3-220ENST00000539232 VPREB1P12018 145 aa4.32□□□□□ -1.72
LMO3-220ENST00000539232 REG3GQ6UW15 175 aa4.32□□□□□ -1.72
LMO3-220ENST00000539232 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.32□□□□□ -1.72
LMO3-220ENST00000539232 MRPL55Q7Z7F7 128 aaKnown RBP4.32□□□□□ -1.72
LMO3-220ENST00000539232 IGLV5-37A0A075B6J1 123 aa4.31□□□□□ -1.72
LMO3-220ENST00000539232 hDV103S1A0JD37 113 aa4.31□□□□□ -1.72
LMO3-220ENST00000539232 OCR1Q9BZK8 76 aa4.31□□□□□ -1.72
LMO3-220ENST00000539232 CYP4F30PQ9H0H9 118 aa4.31□□□□□ -1.72
LMO3-220ENST00000539232 LPAP08519 4548 aa4.3□□□□□ -1.72
LMO3-220ENST00000539232 ZNF861PO60384 105 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms