RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 RYR1P21817 5038 aa4.4□□□□□ -1.71
MSH6-209ENST00000538136 UBL5Q9BZL1 73 aa4.39□□□□□ -1.71
MSH6-209ENST00000538136 DNAH11Q96DT5 4516 aa4.39□□□□□ -1.71
MSH6-209ENST00000538136 ELOF1P60002 83 aaKnown RBP4.39□□□□□ -1.71
MSH6-209ENST00000538136 DNAH10Q8IVF4 4471 aa4.38□□□□□ -1.71
MSH6-209ENST00000538136 SPRR4Q96PI1 79 aa4.38□□□□□ -1.71
MSH6-209ENST00000538136 A0A1B0GVY2 172 aa4.37□□□□□ -1.71
MSH6-209ENST00000538136 K7EP34 96 aa4.36□□□□□ -1.71
MSH6-209ENST00000538136 Q8N377 158 aa4.36□□□□□ -1.71
MSH6-209ENST00000538136 OBSCN-AS1Q96MR7 158 aa4.36□□□□□ -1.71
MSH6-209ENST00000538136 PLA2G2DQ9UNK4 145 aa4.36□□□□□ -1.71
MSH6-209ENST00000538136 BPY2O14599 106 aa4.36□□□□□ -1.71
MSH6-209ENST00000538136 DNAH5Q8TE73 4624 aa4.36□□□□□ -1.71
MSH6-209ENST00000538136 IGLV7-46A0A075B6I9 117 aa4.36□□□□□ -1.71
MSH6-209ENST00000538136 Q96NJ1 140 aa4.34□□□□□ -1.71
MSH6-209ENST00000538136 CMYA5Q8N3K9 4069 aa4.34□□□□□ -1.72
MSH6-209ENST00000538136 JMJD7-PLA2G4BH0Y9G9 81 aa4.33□□□□□ -1.72
MSH6-209ENST00000538136 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
MSH6-209ENST00000538136 FAM236DA0A1B0GTK5 79 aa4.33□□□□□ -1.72
MSH6-209ENST00000538136 FAM236CP0DP71 79 aa4.33□□□□□ -1.72
MSH6-209ENST00000538136 IGFL1Q6UW32 110 aa4.32□□□□□ -1.72
MSH6-209ENST00000538136 EPPK1P58107 5090 aaKnown RBP4.32□□□□□ -1.72
MSH6-209ENST00000538136 DSCR10P59022 87 aa4.31□□□□□ -1.72
MSH6-209ENST00000538136 SS18L2Q9UHA2 77 aa4.31□□□□□ -1.72
MSH6-209ENST00000538136 SACSQ9NZJ4 4579 aa4.3□□□□□ -1.72
MSH6-209ENST00000538136 LIMD2Q9BT23 127 aa4.3□□□□□ -1.72
MSH6-209ENST00000538136 IGKV2D-30A0A075B6S6 120 aa4.3□□□□□ -1.72
MSH6-209ENST00000538136 IGKV2-30P06310 120 aa4.3□□□□□ -1.72
MSH6-209ENST00000538136 DNAH7Q8WXX0 4024 aa4.29□□□□□ -1.72
MSH6-209ENST00000538136 PPDPFLQ8WWR9 84 aa4.29□□□□□ -1.72
MSH6-209ENST00000538136 FAT3Q8TDW7 4589 aa4.29□□□□□ -1.72
MSH6-209ENST00000538136 LINC01547P58512 204 aaPredicted RBP4.29□□□□□ -1.72
MSH6-209ENST00000538136 TEN1Q86WV5 123 aa4.29□□□□□ -1.72
MSH6-209ENST00000538136 Q6ZSA8 131 aa4.28□□□□□ -1.72
MSH6-209ENST00000538136 Q6JHZ5 121 aa4.28□□□□□ -1.72
MSH6-209ENST00000538136 F8W1H4 67 aa4.28□□□□□ -1.72
MSH6-209ENST00000538136 H3BT86 120 aa4.27□□□□□ -1.73
MSH6-209ENST00000538136 DYNC1H1Q14204 4646 aaKnown RBP4.27□□□□□ -1.73
MSH6-209ENST00000538136 A0A087WVE0 104 aa4.26□□□□□ -1.73
MSH6-209ENST00000538136 SSBP3-AS1Q7Z2R9 100 aa4.26□□□□□ -1.73
MSH6-209ENST00000538136 PKHD1P08F94 4074 aa4.26□□□□□ -1.73
MSH6-209ENST00000538136 FRAS1Q86XX4 4008 aa4.25□□□□□ -1.73
MSH6-209ENST00000538136 VPS13DQ5THJ4 4388 aa4.25□□□□□ -1.73
MSH6-209ENST00000538136 LRP1BQ9NZR2 4599 aa4.25□□□□□ -1.73
MSH6-209ENST00000538136 IGLV5-37A0A075B6J1 123 aa4.25□□□□□ -1.73
MSH6-209ENST00000538136 KRTAP13-2Q52LG2 175 aa4.25□□□□□ -1.73
MSH6-209ENST00000538136 MYCBP2O75592 4640 aa4.25□□□□□ -1.73
MSH6-209ENST00000538136 M0R2T5 61 aa4.25□□□□□ -1.73
MSH6-209ENST00000538136 ANAPC13Q9BS18 74 aa4.25□□□□□ -1.73
MSH6-209ENST00000538136 MT-ATP8P03928 68 aa4.24□□□□□ -1.73
MSH6-209ENST00000538136 ATP11AUNQ6ZP68 121 aa4.24□□□□□ -1.73
MSH6-209ENST00000538136 LINC00846Q9NV44 126 aa4.24□□□□□ -1.73
MSH6-209ENST00000538136 RYR2Q92736 4967 aa4.24□□□□□ -1.73
MSH6-209ENST00000538136 HERC2O95714 4834 aa4.24□□□□□ -1.73
MSH6-209ENST00000538136 IGLV8-61A0A075B6I0 122 aa4.24□□□□□ -1.73
MSH6-209ENST00000538136 SPINK1P00995 79 aa4.24□□□□□ -1.73
MSH6-209ENST00000538136 PCLOQ9Y6V0 5065 aa4.23□□□□□ -1.73
MSH6-209ENST00000538136 A0A1B0GX51 115 aa4.23□□□□□ -1.73
MSH6-209ENST00000538136 A0A1W2PNM2 257 aa4.23□□□□□ -1.73
MSH6-209ENST00000538136 LINC00313P59037 77 aa4.23□□□□□ -1.73
MSH6-209ENST00000538136 SPRR1AP35321 89 aa4.22□□□□□ -1.73
MSH6-209ENST00000538136 SPAG11AQ6PDA7 123 aa4.22□□□□□ -1.73
MSH6-209ENST00000538136 SMCPP49901 116 aaPredicted RBP4.21□□□□□ -1.74
MSH6-209ENST00000538136 Q6ZVQ6 151 aa4.21□□□□□ -1.74
MSH6-209ENST00000538136 PCOTHQ58A44 107 aa4.21□□□□□ -1.74
MSH6-209ENST00000538136 HCG22E2RYF7 251 aa4.2□□□□□ -1.74
MSH6-209ENST00000538136 PDE6GP18545 87 aa4.2□□□□□ -1.74
MSH6-209ENST00000538136 VPS13BQ7Z7G8 4022 aa4.2□□□□□ -1.74
MSH6-209ENST00000538136 SMIM20Q8N5G0 67 aa4.2□□□□□ -1.74
MSH6-209ENST00000538136 LINC01600Q96MT4 127 aa4.2□□□□□ -1.74
MSH6-209ENST00000538136 TRBV7-6A0A0J9YX20 115 aa4.19□□□□□ -1.74
MSH6-209ENST00000538136 TRBV7-7A0A0K0K1E9 115 aa4.19□□□□□ -1.74
MSH6-209ENST00000538136 CASC2Q6XLA1 102 aa4.19□□□□□ -1.74
MSH6-209ENST00000538136 SMIM29Q86T20 159 aa4.19□□□□□ -1.74
MSH6-209ENST00000538136 LRP1Q07954 4544 aaKnown RBP4.19□□□□□ -1.74
MSH6-209ENST00000538136 K7EQZ3 153 aa4.19□□□□□ -1.74
MSH6-209ENST00000538136 PRO0461Q9UI25 63 aa4.19□□□□□ -1.74
MSH6-209ENST00000538136 KRTAP4-16G5E9R7 235 aaPredicted RBP4.18□□□□□ -1.74
MSH6-209ENST00000538136 Q6ZQT0 140 aa4.18□□□□□ -1.74
MSH6-209ENST00000538136 APOBP04114 4563 aaKnown RBP4.17□□□□□ -1.74
MSH6-209ENST00000538136 KRTAP1-4P0C5Y4 121 aa4.17□□□□□ -1.74
MSH6-209ENST00000538136 H3BQ85 93 aa4.17□□□□□ -1.74
MSH6-209ENST00000538136 KRTAP17-1Q9BYP8 105 aa4.17□□□□□ -1.74
MSH6-209ENST00000538136 DNAH6Q9C0G6 4158 aa4.17□□□□□ -1.74
MSH6-209ENST00000538136 OXTP01178 125 aa4.16□□□□□ -1.74
MSH6-209ENST00000538136 FAM236AA0A1B0GUQ0 79 aa4.16□□□□□ -1.74
MSH6-209ENST00000538136 FAM236BA0A1B0GV22 79 aa4.16□□□□□ -1.74
MSH6-209ENST00000538136 FAM229BQ4G0N7 80 aa4.16□□□□□ -1.74
MSH6-209ENST00000538136 C1orf195Q5TG92 126 aa4.15□□□□□ -1.74
MSH6-209ENST00000538136 CCDC179H3BU77 68 aa4.15□□□□□ -1.75
MSH6-209ENST00000538136 hDV103S1A0JD37 113 aa4.15□□□□□ -1.75
MSH6-209ENST00000538136 DNAH3Q8TD57 4116 aa4.14□□□□□ -1.75
MSH6-209ENST00000538136 LINC00208Q96KT6 92 aa4.14□□□□□ -1.75
MSH6-209ENST00000538136 DNAH2Q9P225 4427 aa4.14□□□□□ -1.75
MSH6-209ENST00000538136 DNAH8Q96JB1 4490 aa4.14□□□□□ -1.75
MSH6-209ENST00000538136 IGLV5-48A0A075B6I7 105 aa4.14□□□□□ -1.75
MSH6-209ENST00000538136 TRBV7-4A0A0J9YYF1 115 aa4.13□□□□□ -1.75
MSH6-209ENST00000538136 NOTCH2NLQ7Z3S9 236 aa4.12□□□□□ -1.75
MSH6-209ENST00000538136 SNURFQ9Y675 71 aa4.12□□□□□ -1.75
MSH6-209ENST00000538136 BIRC6Q9NR09 4857 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms