RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 TENM2Q9NT68 2774 aa9.69□□□□□ -0.86
MKS1-204ENST00000537529 C1orf134Q5TEV5 83 aa9.69□□□□□ -0.86
MKS1-204ENST00000537529 MEGF8Q7Z7M0 2845 aa9.69□□□□□ -0.86
MKS1-204ENST00000537529 DNAH7Q8WXX0 4024 aa9.69□□□□□ -0.86
MKS1-204ENST00000537529 VPS13DQ5THJ4 4388 aa9.69□□□□□ -0.86
MKS1-204ENST00000537529 KRTAP13-1Q8IUC0 172 aa9.68□□□□□ -0.86
MKS1-204ENST00000537529 PRKDCP78527 4128 aaKnown RBP9.67□□□□□ -0.86
MKS1-204ENST00000537529 STARD9Q9P2P6 4700 aa9.66□□□□□ -0.86
MKS1-204ENST00000537529 CYSTM1Q9H1C7 97 aa9.66□□□□□ -0.86
MKS1-204ENST00000537529 A0A0G2JQZ4 141 aa9.65□□□□□ -0.86
MKS1-204ENST00000537529 IGLV5-52A0A0A0MRZ9 124 aa9.65□□□□□ -0.87
MKS1-204ENST00000537529 LY6G6CO95867 125 aa9.65□□□□□ -0.87
MKS1-204ENST00000537529 C20orf197Q8N268 126 aa9.64□□□□□ -0.87
MKS1-204ENST00000537529 TMEM258P61165 79 aa9.63□□□□□ -0.87
MKS1-204ENST00000537529 PLAC8Q9NZF1 115 aa9.63□□□□□ -0.87
MKS1-204ENST00000537529 A0A087WSZ3 146 aa9.61□□□□□ -0.87
MKS1-204ENST00000537529 DSCR10P59022 87 aa9.6□□□□□ -0.87
MKS1-204ENST00000537529 KRTAP21-3Q3LHN1 58 aa9.6□□□□□ -0.87
MKS1-204ENST00000537529 ZNF706Q9Y5V0 76 aaPredicted RBP9.58□□□□□ -0.88
MKS1-204ENST00000537529 WWC2-AS2Q96NR7 200 aa9.57□□□□□ -0.88
MKS1-204ENST00000537529 PSORS1C2Q9UIG4 136 aa9.57□□□□□ -0.88
MKS1-204ENST00000537529 K7EQZ3 153 aa9.57□□□□□ -0.88
MKS1-204ENST00000537529 KLKP1Q107X0 134 aa9.57□□□□□ -0.88
MKS1-204ENST00000537529 OCR1Q9BZK8 76 aa9.55□□□□□ -0.88
MKS1-204ENST00000537529 LINC00483Q53H64 154 aa9.55□□□□□ -0.88
MKS1-204ENST00000537529 DNHD1Q96M86 4753 aa9.54□□□□□ -0.88
MKS1-204ENST00000537529 SNURFQ9Y675 71 aa9.52□□□□□ -0.89
MKS1-204ENST00000537529 IGLV9-49A0A0B4J1Y8 123 aa9.51□□□□□ -0.89
MKS1-204ENST00000537529 ZNF861PO60384 105 aa9.51□□□□□ -0.89
MKS1-204ENST00000537529 DEFB116Q30KQ4 102 aa9.51□□□□□ -0.89
MKS1-204ENST00000537529 HCG22E2RYF7 251 aa9.51□□□□□ -0.89
MKS1-204ENST00000537529 RPL37AP61513 92 aaKnown RBP9.51□□□□□ -0.89
MKS1-204ENST00000537529 TMEM254Q8TBM7 123 aa9.5□□□□□ -0.89
MKS1-204ENST00000537529 H7BZZ5 65 aa9.49□□□□□ -0.89
MKS1-204ENST00000537529 J3KT08 172 aa9.49□□□□□ -0.89
MKS1-204ENST00000537529 NDUFC1O43677 76 aa9.49□□□□□ -0.89
MKS1-204ENST00000537529 FBN3Q75N90 2809 aa9.48□□□□□ -0.89
MKS1-204ENST00000537529 FAM30AQ9NZY2 134 aa9.47□□□□□ -0.89
MKS1-204ENST00000537529 DNAH17Q9UFH2 4485 aa9.47□□□□□ -0.89
MKS1-204ENST00000537529 LINC00472Q9H8W2 130 aa9.47□□□□□ -0.89
MKS1-204ENST00000537529 RPS28P62857 69 aaKnown RBP9.46□□□□□ -0.89
MKS1-204ENST00000537529 FAM236DA0A1B0GTK5 79 aa9.46□□□□□ -0.9
MKS1-204ENST00000537529 FAM236CP0DP71 79 aa9.46□□□□□ -0.9
MKS1-204ENST00000537529 IGLV7-43P04211 117 aa9.44□□□□□ -0.9
MKS1-204ENST00000537529 KRTAP10-2P60368 255 aa9.44□□□□□ -0.9
MKS1-204ENST00000537529 A0A0U1RQV1 116 aa9.44□□□□□ -0.9
MKS1-204ENST00000537529 A8MWP4 228 aa9.44□□□□□ -0.9
MKS1-204ENST00000537529 DNAH2Q9P225 4427 aa9.43□□□□□ -0.9
MKS1-204ENST00000537529 MOBPQ13875 183 aa9.43□□□□□ -0.9
MKS1-204ENST00000537529 PRR15Q8IV56 129 aa9.43□□□□□ -0.9
MKS1-204ENST00000537529 LCE6AA0A183 80 aa9.41□□□□□ -0.9
MKS1-204ENST00000537529 WFDC13Q8IUB5 93 aa9.41□□□□□ -0.9
MKS1-204ENST00000537529 KMT2AQ03164 3969 aa9.41□□□□□ -0.9
MKS1-204ENST00000537529 HECTD4Q9Y4D8 3996 aa9.41□□□□□ -0.9
MKS1-204ENST00000537529 DNAH6Q9C0G6 4158 aa9.41□□□□□ -0.9
MKS1-204ENST00000537529 CIRBP-AS1Q8TBR5 109 aa9.41□□□□□ -0.9
MKS1-204ENST00000537529 SRRM2Q9UQ35 2752 aaKnown RBP9.4□□□□□ -0.91
MKS1-204ENST00000537529 ANAPC11Q9NYG5 84 aa9.39□□□□□ -0.91
MKS1-204ENST00000537529 HRCT1Q6UXD1 115 aa9.38□□□□□ -0.91
MKS1-204ENST00000537529 ALMS1Q8TCU4 4167 aa9.38□□□□□ -0.91
MKS1-204ENST00000537529 KRTAP29-1A8MX34 341 aaPredicted RBP9.38□□□□□ -0.91
MKS1-204ENST00000537529 ATP5EP56381 51 aaPredicted RBP9.38□□□□□ -0.91
MKS1-204ENST00000537529 CASC2Q6XLA1 102 aa9.38□□□□□ -0.91
MKS1-204ENST00000537529 NDUFB1O75438 58 aa9.36□□□□□ -0.91
MKS1-204ENST00000537529 C5orf47Q569G3 176 aa9.36□□□□□ -0.91
MKS1-204ENST00000537529 Q6ZSA8 131 aa9.36□□□□□ -0.91
MKS1-204ENST00000537529 Q96NJ1 140 aa9.35□□□□□ -0.91
MKS1-204ENST00000537529 TGP01266 2768 aa9.34□□□□□ -0.91
MKS1-204ENST00000537529 KRTAP10-1P60331 282 aa9.34□□□□□ -0.91
MKS1-204ENST00000537529 SERP1Q9Y6X1 66 aa9.33□□□□□ -0.92
MKS1-204ENST00000537529 MMP24-AS1A0A0U1RRL7 71 aa9.31□□□□□ -0.92
MKS1-204ENST00000537529 OXTP01178 125 aa9.31□□□□□ -0.92
MKS1-204ENST00000537529 ZCCHC13Q8WW36 166 aaKnown RBP9.3□□□□□ -0.92
MKS1-204ENST00000537529 DNAH8Q96JB1 4490 aa9.29□□□□□ -0.92
MKS1-204ENST00000537529 MP68P56378 58 aa9.28□□□□□ -0.92
MKS1-204ENST00000537529 CDK2AP2O75956 126 aa9.28□□□□□ -0.92
MKS1-204ENST00000537529 CD164Q04900 197 aa9.27□□□□□ -0.93
MKS1-204ENST00000537529 SSBP3-AS1Q7Z2R9 100 aa9.27□□□□□ -0.93
MKS1-204ENST00000537529 hDV103S1A0JD37 113 aa9.27□□□□□ -0.93
MKS1-204ENST00000537529 A0A1B0GVX0 72 aa9.25□□□□□ -0.93
MKS1-204ENST00000537529 C8orf17Q9NRJ1 99 aa9.25□□□□□ -0.93
MKS1-204ENST00000537529 H0Y9P7 68 aa9.23□□□□□ -0.93
MKS1-204ENST00000537529 H3BPC8 53 aa9.23□□□□□ -0.93
MKS1-204ENST00000537529 ASB16-AS1Q495Z4 193 aa9.22□□□□□ -0.93
MKS1-204ENST00000537529 DNAH11Q96DT5 4516 aa9.22□□□□□ -0.93
MKS1-204ENST00000537529 IGHV6-1A0A0B4J1U7 121 aa9.22□□□□□ -0.93
MKS1-204ENST00000537529 FRAS1Q86XX4 4008 aa9.22□□□□□ -0.93
MKS1-204ENST00000537529 FAM229BQ4G0N7 80 aa9.21□□□□□ -0.93
MKS1-204ENST00000537529 LINC00208Q96KT6 92 aa9.2□□□□□ -0.94
MKS1-204ENST00000537529 DNAH5Q8TE73 4624 aa9.19□□□□□ -0.94
MKS1-204ENST00000537529 TP53AIP1Q9HCN2 124 aa9.18□□□□□ -0.94
MKS1-204ENST00000537529 TRAV22A0A0B4J277 110 aa9.17□□□□□ -0.94
MKS1-204ENST00000537529 A0A087X002 238 aa9.16□□□□□ -0.94
MKS1-204ENST00000537529 SPINK6Q6UWN8 80 aa9.16□□□□□ -0.94
MKS1-204ENST00000537529 KRTAP13-2Q52LG2 175 aa9.16□□□□□ -0.94
MKS1-204ENST00000537529 LINC00336Q6ZUF6 198 aa9.15□□□□□ -0.94
MKS1-204ENST00000537529 SMIM26A0A096LP01 95 aa9.14□□□□□ -0.95
MKS1-204ENST00000537529 C1orf64Q8NEQ6 169 aa9.14□□□□□ -0.95
MKS1-204ENST00000537529 MRPL34Q9BQ48 92 aaKnown RBP9.14□□□□□ -0.95
MKS1-204ENST00000537529 PKD1P98161 4303 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms