RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 H7C2G1 150 aa4.52□□□□□ -1.69
CPSF7-217ENST00000537162 SPRR2DP22532 72 aa4.52□□□□□ -1.69
CPSF7-217ENST00000537162 PFN2P35080 140 aa4.52□□□□□ -1.69
CPSF7-217ENST00000537162 BATFQ16520 125 aa4.52□□□□□ -1.69
CPSF7-217ENST00000537162 SLC25A34Q6PIV7 304 aa4.52□□□□□ -1.69
CPSF7-217ENST00000537162 SFTA2Q6UW10 78 aa4.52□□□□□ -1.69
CPSF7-217ENST00000537162 ATOH7Q8N100 152 aa4.52□□□□□ -1.69
CPSF7-217ENST00000537162 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
CPSF7-217ENST00000537162 H3BRM9 83 aa4.51□□□□□ -1.69
CPSF7-217ENST00000537162 RPL24P83731 157 aaKnown RBP4.51□□□□□ -1.69
CPSF7-217ENST00000537162 BOD1L2Q8IYS8 172 aa4.51□□□□□ -1.69
CPSF7-217ENST00000537162 SMIM1B2RUZ4 78 aa4.5□□□□□ -1.69
CPSF7-217ENST00000537162 H0Y8G0 127 aa4.5□□□□□ -1.69
CPSF7-217ENST00000537162 COX8AP10176 69 aa4.5□□□□□ -1.69
CPSF7-217ENST00000537162 ZNF22P17026 224 aaPredicted RBP4.5□□□□□ -1.69
CPSF7-217ENST00000537162 NMUP48645 174 aa4.5□□□□□ -1.69
CPSF7-217ENST00000537162 COX7B2Q8TF08 81 aa4.5□□□□□ -1.69
CPSF7-217ENST00000537162 Q9BRP9 147 aa4.5□□□□□ -1.69
CPSF7-217ENST00000537162 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
CPSF7-217ENST00000537162 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
CPSF7-217ENST00000537162 Q75L30 129 aa4.49□□□□□ -1.69
CPSF7-217ENST00000537162 HIGD1BQ9P298 99 aa4.49□□□□□ -1.69
CPSF7-217ENST00000537162 IGLV5-39A0A0G2JS06 123 aa4.48□□□□□ -1.69
CPSF7-217ENST00000537162 ETDCA0A1B0GVM5 59 aa4.48□□□□□ -1.69
CPSF7-217ENST00000537162 TMEM223A0PJW6 202 aa4.48□□□□□ -1.69
CPSF7-217ENST00000537162 A6NDN8 102 aa4.48□□□□□ -1.69
CPSF7-217ENST00000537162 C6orf99Q4VX62 202 aa4.48□□□□□ -1.69
CPSF7-217ENST00000537162 A0A0G2JQZ4 141 aa4.47□□□□□ -1.69
CPSF7-217ENST00000537162 LEPROTO15243 131 aa4.47□□□□□ -1.69
CPSF7-217ENST00000537162 HINT1P49773 126 aaPredicted RBP4.47□□□□□ -1.69
CPSF7-217ENST00000537162 TMEM170BQ5T4T1 132 aa4.47□□□□□ -1.69
CPSF7-217ENST00000537162 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.69
CPSF7-217ENST00000537162 J3QQQ9 107 aa4.46□□□□□ -1.7
CPSF7-217ENST00000537162 KRTAP10-5P60370 271 aa4.46□□□□□ -1.7
CPSF7-217ENST00000537162 HSD52Q0P140 79 aa4.46□□□□□ -1.7
CPSF7-217ENST00000537162 Q1RN00 199 aa4.46□□□□□ -1.7
CPSF7-217ENST00000537162 Q6ZVH6 145 aa4.46□□□□□ -1.7
CPSF7-217ENST00000537162 SMIM29Q86T20 159 aa4.46□□□□□ -1.7
CPSF7-217ENST00000537162 ST20-AS1Q8NBB2 130 aa4.46□□□□□ -1.7
CPSF7-217ENST00000537162 KCNQ1DNQ9H478 68 aa4.46□□□□□ -1.7
CPSF7-217ENST00000537162 MYMXA0A1B0GTQ4 84 aa4.45□□□□□ -1.7
CPSF7-217ENST00000537162 TIMM17BO60830 172 aa4.45□□□□□ -1.7
CPSF7-217ENST00000537162 HERV-K104P63124 156 aa4.45□□□□□ -1.7
CPSF7-217ENST00000537162 TAL2Q16559 108 aa4.45□□□□□ -1.7
CPSF7-217ENST00000537162 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
CPSF7-217ENST00000537162 MPLKIPQ8TAP9 179 aa4.45□□□□□ -1.7
CPSF7-217ENST00000537162 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
CPSF7-217ENST00000537162 SPANXB1Q9NS25 103 aaPredicted RBP4.45□□□□□ -1.7
CPSF7-217ENST00000537162 MT1BP07438 61 aa4.44□□□□□ -1.7
CPSF7-217ENST00000537162 BVES-AS1Q5T3Y7 98 aa4.44□□□□□ -1.7
CPSF7-217ENST00000537162 OBSCN-AS1Q96MR7 158 aa4.44□□□□□ -1.7
CPSF7-217ENST00000537162 A0A0J9YXY3 114 aa4.43□□□□□ -1.7
CPSF7-217ENST00000537162 ZNF815PA8K554 130 aa4.43□□□□□ -1.7
CPSF7-217ENST00000537162 VAMP3Q15836 100 aa4.43□□□□□ -1.7
CPSF7-217ENST00000537162 C2orf91Q6ZV80 131 aa4.43□□□□□ -1.7
CPSF7-217ENST00000537162 PCP2Q8IVA1 136 aa4.43□□□□□ -1.7
CPSF7-217ENST00000537162 COPS9Q8WXC6 57 aa4.43□□□□□ -1.7
CPSF7-217ENST00000537162 SPINK8P0C7L1 97 aa4.42□□□□□ -1.7
CPSF7-217ENST00000537162 UBE2V1Q13404 147 aa4.42□□□□□ -1.7
CPSF7-217ENST00000537162 Q5XG85 94 aa4.42□□□□□ -1.7
CPSF7-217ENST00000537162 GTF2H5Q6ZYL4 71 aa4.42□□□□□ -1.7
CPSF7-217ENST00000537162 ZNF625Q96I27 306 aaPredicted RBP4.42□□□□□ -1.7
CPSF7-217ENST00000537162 ERG28Q9UKR5 140 aa4.42□□□□□ -1.7
CPSF7-217ENST00000537162 LOC107984156A0A0G2JMH3 177 aa4.41□□□□□ -1.7
CPSF7-217ENST00000537162 NCR3O14931 201 aa4.41□□□□□ -1.7
CPSF7-217ENST00000537162 HRES1P13985 223 aa4.41□□□□□ -1.7
CPSF7-217ENST00000537162 TSPEAR-AS2P59090 65 aa4.41□□□□□ -1.7
CPSF7-217ENST00000537162 COX17Q14061 63 aa4.41□□□□□ -1.7
CPSF7-217ENST00000537162 SCGB1D4Q6XE38 83 aa4.41□□□□□ -1.7
CPSF7-217ENST00000537162 ARL17AQ8IVW1 177 aa4.41□□□□□ -1.7
CPSF7-217ENST00000537162 SPANXDQ9BXN6 97 aa4.41□□□□□ -1.7
CPSF7-217ENST00000537162 SPANXCQ9NY87 97 aa4.41□□□□□ -1.7
CPSF7-217ENST00000537162 KRTAP16-1A8MUX0 517 aa4.4□□□□□ -1.71
CPSF7-217ENST00000537162 IFITM1P13164 125 aa4.4□□□□□ -1.71
CPSF7-217ENST00000537162 TRBV10-3A0A0K0K1G6 114 aa4.39□□□□□ -1.71
CPSF7-217ENST00000537162 A8MWP4 228 aa4.39□□□□□ -1.71
CPSF7-217ENST00000537162 TAX1BP3O14907 124 aa4.39□□□□□ -1.71
CPSF7-217ENST00000537162 CD164Q04900 197 aa4.39□□□□□ -1.71
CPSF7-217ENST00000537162 CBY1Q9Y3M2 126 aa4.39□□□□□ -1.71
CPSF7-217ENST00000537162 SMIM13P0DJ93 91 aa4.38□□□□□ -1.71
CPSF7-217ENST00000537162 Q6ZRX8 168 aa4.38□□□□□ -1.71
CPSF7-217ENST00000537162 CEND1Q8N111 149 aa4.38□□□□□ -1.71
CPSF7-217ENST00000537162 LITAFQ99732 161 aa4.38□□□□□ -1.71
CPSF7-217ENST00000537162 A0A1B0GWB2 263 aa4.37□□□□□ -1.71
CPSF7-217ENST00000537162 FABP2P12104 132 aa4.37□□□□□ -1.71
CPSF7-217ENST00000537162 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
CPSF7-217ENST00000537162 LYRM7Q5U5X0 104 aa4.37□□□□□ -1.71
CPSF7-217ENST00000537162 HIST1H4GQ99525 98 aa4.37□□□□□ -1.71
CPSF7-217ENST00000537162 TTTY13Q9BZ97 58 aa4.37□□□□□ -1.71
CPSF7-217ENST00000537162 RBM12B-AS1Q9P1G2 102 aa4.37□□□□□ -1.71
CPSF7-217ENST00000537162 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
CPSF7-217ENST00000537162 K7ERU9 68 aa4.36□□□□□ -1.71
CPSF7-217ENST00000537162 MEIG1Q5JSS6 88 aa4.36□□□□□ -1.71
CPSF7-217ENST00000537162 A0A0B4J2C4 111 aa4.35□□□□□ -1.71
CPSF7-217ENST00000537162 A0A1W2PPM0 123 aa4.35□□□□□ -1.71
CPSF7-217ENST00000537162 H3BUT2 72 aa4.35□□□□□ -1.71
CPSF7-217ENST00000537162 K7EP34 96 aa4.35□□□□□ -1.71
CPSF7-217ENST00000537162 AHNAK2Q8IVF2 5795 aa4.35□□□□□ -1.71
CPSF7-217ENST00000537162 NDUFC2O95298 119 aa4.34□□□□□ -1.71
CPSF7-217ENST00000537162 Q96NJ1 140 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms