RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CHTF8P0CG12 524 aa8.51□□□□□ -1.05
SMG6-203ENST00000536871 SPRR1BP22528 89 aa8.51□□□□□ -1.05
SMG6-203ENST00000536871 SEC61GP60059 68 aa8.51□□□□□ -1.05
SMG6-203ENST00000536871 PRLHP81277 87 aa8.5□□□□□ -1.05
SMG6-203ENST00000536871 SPACA4Q8TDM5 124 aa8.5□□□□□ -1.05
SMG6-203ENST00000536871 HIGD2AQ9BW72 106 aa8.5□□□□□ -1.05
SMG6-203ENST00000536871 UBE2AP49459 152 aa8.49□□□□□ -1.05
SMG6-203ENST00000536871 SMIM29Q86T20 159 aa8.49□□□□□ -1.05
SMG6-203ENST00000536871 DNHD1Q96M86 4753 aa8.49□□□□□ -1.05
SMG6-203ENST00000536871 COL7A1Q02388 2944 aa8.48□□□□□ -1.05
SMG6-203ENST00000536871 A0A1W2PNM2 257 aa8.48□□□□□ -1.05
SMG6-203ENST00000536871 BPY2O14599 106 aa8.48□□□□□ -1.05
SMG6-203ENST00000536871 C1orf134Q5TEV5 83 aa8.48□□□□□ -1.05
SMG6-203ENST00000536871 BRK1Q8WUW1 75 aa8.47□□□□□ -1.05
SMG6-203ENST00000536871 C3orf84H3BNL1 204 aa8.46□□□□□ -1.06
SMG6-203ENST00000536871 RTL8CO15255 209 aa8.46□□□□□ -1.06
SMG6-203ENST00000536871 LINC00476Q8WZB0 136 aa8.46□□□□□ -1.06
SMG6-203ENST00000536871 SNURFQ9Y675 71 aa8.45□□□□□ -1.06
SMG6-203ENST00000536871 TMEM254Q8TBM7 123 aa8.45□□□□□ -1.06
SMG6-203ENST00000536871 PRR15Q8IV56 129 aa8.43□□□□□ -1.06
SMG6-203ENST00000536871 WWC2-AS2Q96NR7 200 aa8.43□□□□□ -1.06
SMG6-203ENST00000536871 KRTAP13-1Q8IUC0 172 aa8.42□□□□□ -1.06
SMG6-203ENST00000536871 IGFL1Q6UW32 110 aa8.41□□□□□ -1.06
SMG6-203ENST00000536871 PLAC8Q9NZF1 115 aa8.41□□□□□ -1.06
SMG6-203ENST00000536871 ZNF706Q9Y5V0 76 aaPredicted RBP8.41□□□□□ -1.06
SMG6-203ENST00000536871 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.41□□□□□ -1.06
SMG6-203ENST00000536871 IGLV5-52A0A0A0MRZ9 124 aa8.4□□□□□ -1.06
SMG6-203ENST00000536871 SCXQ7RTU7 201 aa8.4□□□□□ -1.06
SMG6-203ENST00000536871 KRTAP11-1Q8IUC1 163 aa8.4□□□□□ -1.06
SMG6-203ENST00000536871 A0A0U1RQV1 116 aa8.4□□□□□ -1.07
SMG6-203ENST00000536871 RPL37AP61513 92 aaKnown RBP8.4□□□□□ -1.07
SMG6-203ENST00000536871 PANO1I0J062 215 aa8.39□□□□□ -1.07
SMG6-203ENST00000536871 LY6G6CO95867 125 aa8.39□□□□□ -1.07
SMG6-203ENST00000536871 IGKV4-1P06312 121 aa8.39□□□□□ -1.07
SMG6-203ENST00000536871 PLECQ15149 4684 aaKnown RBP8.38□□□□□ -1.07
SMG6-203ENST00000536871 OCR1Q9BZK8 76 aa8.36□□□□□ -1.07
SMG6-203ENST00000536871 VPS13DQ5THJ4 4388 aa8.35□□□□□ -1.07
SMG6-203ENST00000536871 Q1T7F1 81 aa8.35□□□□□ -1.07
SMG6-203ENST00000536871 PMAIP1Q13794 54 aa8.34□□□□□ -1.07
SMG6-203ENST00000536871 LINC00483Q53H64 154 aa8.34□□□□□ -1.07
SMG6-203ENST00000536871 DNAH10Q8IVF4 4471 aa8.33□□□□□ -1.08
SMG6-203ENST00000536871 CSMD3Q7Z407 3707 aa8.33□□□□□ -1.08
SMG6-203ENST00000536871 A0A087WSZ3 146 aa8.32□□□□□ -1.08
SMG6-203ENST00000536871 LCE6AA0A183 80 aa8.32□□□□□ -1.08
SMG6-203ENST00000536871 FAM229BQ4G0N7 80 aa8.32□□□□□ -1.08
SMG6-203ENST00000536871 ZNF861PO60384 105 aa8.31□□□□□ -1.08
SMG6-203ENST00000536871 PSORS1C2Q9UIG4 136 aa8.31□□□□□ -1.08
SMG6-203ENST00000536871 DNAH7Q8WXX0 4024 aa8.31□□□□□ -1.08
SMG6-203ENST00000536871 hDV103S1A0JD37 113 aa8.3□□□□□ -1.08
SMG6-203ENST00000536871 DSCR10P59022 87 aa8.3□□□□□ -1.08
SMG6-203ENST00000536871 Q8N9L7 120 aa8.3□□□□□ -1.08
SMG6-203ENST00000536871 MPLKIPQ8TAP9 179 aa8.3□□□□□ -1.08
SMG6-203ENST00000536871 PRKDCP78527 4128 aaKnown RBP8.29□□□□□ -1.08
SMG6-203ENST00000536871 LYSTQ99698 3801 aa8.29□□□□□ -1.08
SMG6-203ENST00000536871 STARD9Q9P2P6 4700 aa8.29□□□□□ -1.08
SMG6-203ENST00000536871 MEGF8Q7Z7M0 2845 aa8.29□□□□□ -1.08
SMG6-203ENST00000536871 CD164Q04900 197 aa8.26□□□□□ -1.09
SMG6-203ENST00000536871 HCG22E2RYF7 251 aa8.25□□□□□ -1.09
SMG6-203ENST00000536871 K7EQZ3 153 aa8.25□□□□□ -1.09
SMG6-203ENST00000536871 CYP4F30PQ9H0H9 118 aa8.25□□□□□ -1.09
SMG6-203ENST00000536871 TENM2Q9NT68 2774 aa8.24□□□□□ -1.09
SMG6-203ENST00000536871 IGLV7-43P04211 117 aa8.23□□□□□ -1.09
SMG6-203ENST00000536871 LINC00472Q9H8W2 130 aa8.23□□□□□ -1.09
SMG6-203ENST00000536871 A0A0G2JQZ4 141 aa8.22□□□□□ -1.09
SMG6-203ENST00000536871 A8MWP4 228 aa8.21□□□□□ -1.09
SMG6-203ENST00000536871 IGLV9-49A0A0B4J1Y8 123 aa8.21□□□□□ -1.1
SMG6-203ENST00000536871 ZCCHC13Q8WW36 166 aaKnown RBP8.21□□□□□ -1.1
SMG6-203ENST00000536871 NDUFB1O75438 58 aa8.19□□□□□ -1.1
SMG6-203ENST00000536871 Q6ZSA8 131 aa8.19□□□□□ -1.1
SMG6-203ENST00000536871 KRTAP10-2P60368 255 aa8.17□□□□□ -1.1
SMG6-203ENST00000536871 C1orf64Q8NEQ6 169 aa8.17□□□□□ -1.1
SMG6-203ENST00000536871 CIRBP-AS1Q8TBR5 109 aa8.17□□□□□ -1.1
SMG6-203ENST00000536871 DNAH17Q9UFH2 4485 aa8.16□□□□□ -1.1
SMG6-203ENST00000536871 MOBPQ13875 183 aa8.15□□□□□ -1.1
SMG6-203ENST00000536871 FBN3Q75N90 2809 aa8.15□□□□□ -1.1
SMG6-203ENST00000536871 DNAH6Q9C0G6 4158 aa8.15□□□□□ -1.1
SMG6-203ENST00000536871 SSBP3-AS1Q7Z2R9 100 aa8.15□□□□□ -1.11
SMG6-203ENST00000536871 DEFB116Q30KQ4 102 aa8.14□□□□□ -1.11
SMG6-203ENST00000536871 FAM30AQ9NZY2 134 aa8.14□□□□□ -1.11
SMG6-203ENST00000536871 TRAV22A0A0B4J277 110 aa8.13□□□□□ -1.11
SMG6-203ENST00000536871 KRTAP29-1A8MX34 341 aaPredicted RBP8.13□□□□□ -1.11
SMG6-203ENST00000536871 CASC2Q6XLA1 102 aa8.13□□□□□ -1.11
SMG6-203ENST00000536871 DNAH2Q9P225 4427 aa8.1□□□□□ -1.11
SMG6-203ENST00000536871 ALMS1Q8TCU4 4167 aa8.1□□□□□ -1.11
SMG6-203ENST00000536871 H3BPC8 53 aa8.1□□□□□ -1.11
SMG6-203ENST00000536871 CDK2AP2O75956 126 aa8.1□□□□□ -1.11
SMG6-203ENST00000536871 KRTAP10-1P60331 282 aa8.1□□□□□ -1.11
SMG6-203ENST00000536871 WFDC13Q8IUB5 93 aa8.1□□□□□ -1.11
SMG6-203ENST00000536871 MP68P56378 58 aa8.09□□□□□ -1.11
SMG6-203ENST00000536871 Q96NJ1 140 aa8.09□□□□□ -1.12
SMG6-203ENST00000536871 LIMD2Q9BT23 127 aa8.09□□□□□ -1.12
SMG6-203ENST00000536871 KTN1-AS1Q86SY8 53 aa8.08□□□□□ -1.12
SMG6-203ENST00000536871 SPANXA2-OT1Q8N9U9 137 aa8.08□□□□□ -1.12
SMG6-203ENST00000536871 KMT2AQ03164 3969 aa8.07□□□□□ -1.12
SMG6-203ENST00000536871 ASB16-AS1Q495Z4 193 aa8.06□□□□□ -1.12
SMG6-203ENST00000536871 NDUFS5O43920 106 aa8.05□□□□□ -1.12
SMG6-203ENST00000536871 TP53AIP1Q9HCN2 124 aa8.05□□□□□ -1.12
SMG6-203ENST00000536871 MMP24-AS1A0A0U1RRL7 71 aa8.04□□□□□ -1.12
SMG6-203ENST00000536871 ANAPC11Q9NYG5 84 aa8.04□□□□□ -1.12
SMG6-203ENST00000536871 HECTD4Q9Y4D8 3996 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms