RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 IGLV5-48A0A075B6I7 105 aa7.18□□□□□ -1.26
RTN3-207ENST00000536011 TRAV13-2A0A0B4J235 113 aa7.18□□□□□ -1.26
RTN3-207ENST00000536011 Q5XG85 94 aa7.18□□□□□ -1.26
RTN3-207ENST00000536011 KRTAP4-2Q9BYR5 136 aa7.18□□□□□ -1.26
RTN3-207ENST00000536011 C9orf92A6NGG3 77 aa7.17□□□□□ -1.26
RTN3-207ENST00000536011 SNRPEP62304 92 aaKnown RBP7.17□□□□□ -1.26
RTN3-207ENST00000536011 MUSTN1Q8IVN3 82 aa7.16□□□□□ -1.26
RTN3-207ENST00000536011 ATOH7Q8N100 152 aa7.16□□□□□ -1.26
RTN3-207ENST00000536011 IGLV8-61A0A075B6I0 122 aa7.14□□□□□ -1.27
RTN3-207ENST00000536011 F8WEM9 126 aa7.14□□□□□ -1.27
RTN3-207ENST00000536011 VAMP3Q15836 100 aa7.14□□□□□ -1.27
RTN3-207ENST00000536011 PCOTHQ58A44 107 aa7.14□□□□□ -1.27
RTN3-207ENST00000536011 SMIM29Q86T20 159 aa7.14□□□□□ -1.27
RTN3-207ENST00000536011 PCP2Q8IVA1 136 aa7.14□□□□□ -1.27
RTN3-207ENST00000536011 TCL1BO95988 128 aa7.13□□□□□ -1.27
RTN3-207ENST00000536011 SMIM11BQ8TCY0 68 aa7.12□□□□□ -1.27
RTN3-207ENST00000536011 HSBP1L1C9JCN9 74 aa7.11□□□□□ -1.27
RTN3-207ENST00000536011 C1orf195Q5TG92 126 aa7.11□□□□□ -1.27
RTN3-207ENST00000536011 KRTAP19-4Q3LI73 84 aa7.1□□□□□ -1.27
RTN3-207ENST00000536011 CFC1BP0CG36 223 aa7.08□□□□□ -1.28
RTN3-207ENST00000536011 S100A2P29034 98 aa7.08□□□□□ -1.28
RTN3-207ENST00000536011 KRTAP9-7A8MTY7 169 aa7.07□□□□□ -1.28
RTN3-207ENST00000536011 Q6JHZ5 121 aa7.07□□□□□ -1.28
RTN3-207ENST00000536011 RPL37P61927 97 aaKnown RBP7.06□□□□□ -1.28
RTN3-207ENST00000536011 LINC00575Q6W349 94 aa7.06□□□□□ -1.28
RTN3-207ENST00000536011 A0A0G2JQZ4 141 aa7.05□□□□□ -1.28
RTN3-207ENST00000536011 hADV29S1A0JD25 119 aa7.05□□□□□ -1.28
RTN3-207ENST00000536011 Q6ZQY7 126 aa7.05□□□□□ -1.28
RTN3-207ENST00000536011 CLEC2BQ92478 149 aa7.05□□□□□ -1.28
RTN3-207ENST00000536011 KRTAP4-11Q9BYQ6 195 aa7.05□□□□□ -1.28
RTN3-207ENST00000536011 KRTAP19-2Q3LHN2 52 aa7.04□□□□□ -1.28
RTN3-207ENST00000536011 HIST1H2BLQ99880 126 aa7.04□□□□□ -1.28
RTN3-207ENST00000536011 MT1HP80294 61 aa7.03□□□□□ -1.28
RTN3-207ENST00000536011 HIST3H2BBQ8N257 126 aa7.03□□□□□ -1.28
RTN3-207ENST00000536011 PPDPFLQ8WWR9 84 aa7.03□□□□□ -1.28
RTN3-207ENST00000536011 BVES-AS1Q5T3Y7 98 aa7.02□□□□□ -1.29
RTN3-207ENST00000536011 S100A6P06703 90 aa7.01□□□□□ -1.29
RTN3-207ENST00000536011 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.01□□□□□ -1.29
RTN3-207ENST00000536011 TRBV7-7A0A0K0K1E9 115 aa7□□□□□ -1.29
RTN3-207ENST00000536011 SCGB1D1O95968 90 aa7□□□□□ -1.29
RTN3-207ENST00000536011 OCIAD2Q56VL3 154 aa7□□□□□ -1.29
RTN3-207ENST00000536011 COX6B2Q6YFQ2 88 aa7□□□□□ -1.29
RTN3-207ENST00000536011 HIST1H4GQ99525 98 aa7□□□□□ -1.29
RTN3-207ENST00000536011 SNCGO76070 127 aa6.99□□□□□ -1.29
RTN3-207ENST00000536011 IGFL1Q6UW32 110 aa6.99□□□□□ -1.29
RTN3-207ENST00000536011 SNHG12Q9BXW3 62 aa6.99□□□□□ -1.29
RTN3-207ENST00000536011 M0R2T5 61 aa6.97□□□□□ -1.29
RTN3-207ENST00000536011 C12orf57Q99622 126 aa6.96□□□□□ -1.3
RTN3-207ENST00000536011 SS18L2Q9UHA2 77 aa6.95□□□□□ -1.3
RTN3-207ENST00000536011 LST1O00453 97 aa6.94□□□□□ -1.3
RTN3-207ENST00000536011 COX8AP10176 69 aa6.94□□□□□ -1.3
RTN3-207ENST00000536011 ATP11AUNQ6ZP68 121 aa6.94□□□□□ -1.3
RTN3-207ENST00000536011 CRCT1Q9UGL9 99 aa6.94□□□□□ -1.3
RTN3-207ENST00000536011 FSIP2Q5CZC0 6907 aa6.94□□□□□ -1.3
RTN3-207ENST00000536011 Q75L30 129 aa6.93□□□□□ -1.3
RTN3-207ENST00000536011 RAB37Q96AX2 223 aa6.93□□□□□ -1.3
RTN3-207ENST00000536011 OBSCN-AS1Q96MR7 158 aa6.93□□□□□ -1.3
RTN3-207ENST00000536011 DLEU1O43261 78 aa6.92□□□□□ -1.3
RTN3-207ENST00000536011 S100A1P23297 94 aa6.92□□□□□ -1.3
RTN3-207ENST00000536011 LCE5AQ5TCM9 118 aa6.92□□□□□ -1.3
RTN3-207ENST00000536011 H0YGX0 51 aa6.91□□□□□ -1.3
RTN3-207ENST00000536011 H3BUT2 72 aa6.91□□□□□ -1.3
RTN3-207ENST00000536011 KRTAP10-6P60371 365 aaPredicted RBP6.91□□□□□ -1.3
RTN3-207ENST00000536011 C9orf118A6NHY6 69 aa6.9□□□□□ -1.3
RTN3-207ENST00000536011 FLGP20930 4061 aaPredicted RBP6.9□□□□□ -1.31
RTN3-207ENST00000536011 Q6Q795 121 aa6.89□□□□□ -1.31
RTN3-207ENST00000536011 A0A0B4J2C4 111 aa6.88□□□□□ -1.31
RTN3-207ENST00000536011 CFC1P0CG37 223 aa6.88□□□□□ -1.31
RTN3-207ENST00000536011 TEN1Q86WV5 123 aa6.88□□□□□ -1.31
RTN3-207ENST00000536011 Q96NJ1 140 aa6.87□□□□□ -1.31
RTN3-207ENST00000536011 HIGD1BQ9P298 99 aa6.87□□□□□ -1.31
RTN3-207ENST00000536011 NDUFV3P56181 108 aaKnown RBP6.86□□□□□ -1.31
RTN3-207ENST00000536011 A0A1B0GX51 115 aa6.85□□□□□ -1.31
RTN3-207ENST00000536011 C14orf144Q96I85 54 aa6.85□□□□□ -1.31
RTN3-207ENST00000536011 SPATA45Q537H7 98 aa6.84□□□□□ -1.31
RTN3-207ENST00000536011 KRTAP9-3Q9BYQ3 159 aa6.84□□□□□ -1.31
RTN3-207ENST00000536011 PAM16Q9Y3D7 125 aa6.84□□□□□ -1.31
RTN3-207ENST00000536011 H3BMG7 143 aa6.83□□□□□ -1.32
RTN3-207ENST00000536011 VAMP8Q9BV40 100 aa6.83□□□□□ -1.32
RTN3-207ENST00000536011 A0A087WSZ3 146 aa6.82□□□□□ -1.32
RTN3-207ENST00000536011 FABP2P12104 132 aa6.82□□□□□ -1.32
RTN3-207ENST00000536011 FAM218AQ96MZ4 157 aa6.82□□□□□ -1.32
RTN3-207ENST00000536011 C20orf166-AS1Q96NR2 134 aa6.82□□□□□ -1.32
RTN3-207ENST00000536011 PRO1854Q9UHT4 67 aa6.82□□□□□ -1.32
RTN3-207ENST00000536011 CEND1Q8N111 149 aa6.81□□□□□ -1.32
RTN3-207ENST00000536011 TRBV20-1A0A075B6N2 111 aa6.8□□□□□ -1.32
RTN3-207ENST00000536011 A8MUU9 505 aa6.79□□□□□ -1.32
RTN3-207ENST00000536011 H3BQ85 93 aa6.79□□□□□ -1.32
RTN3-207ENST00000536011 C2orf91Q6ZV80 131 aa6.79□□□□□ -1.32
RTN3-207ENST00000536011 DNAL4O96015 105 aa6.78□□□□□ -1.32
RTN3-207ENST00000536011 SIGMAR1Q99720 223 aa6.78□□□□□ -1.32
RTN3-207ENST00000536011 TRIAP1O43715 76 aa6.75□□□□□ -1.33
RTN3-207ENST00000536011 TRBV7-4A0A0J9YYF1 115 aa6.74□□□□□ -1.33
RTN3-207ENST00000536011 DSCR10P59022 87 aa6.74□□□□□ -1.33
RTN3-207ENST00000536011 ANKRD29Q8N6D5 301 aa6.74□□□□□ -1.33
RTN3-207ENST00000536011 ORMDL1Q9P0S3 153 aa6.74□□□□□ -1.33
RTN3-207ENST00000536011 A0A1W2PNM2 257 aa6.73□□□□□ -1.33
RTN3-207ENST00000536011 COX6CP09669 75 aa6.73□□□□□ -1.33
RTN3-207ENST00000536011 FXYD2P54710 66 aa6.73□□□□□ -1.33
RTN3-207ENST00000536011 TMEM256-PLSCR3K7ERE1 68 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms