RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 PLA2G1BP04054 148 aaKnown RBP13.82□□□□□ -0.2
RBFOX1-206ENST00000535565 RBM3P98179 157 aaKnown RBP13.82□□□□□ -0.2
RBFOX1-206ENST00000535565 SMIM29Q86T20 159 aa13.82□□□□□ -0.2
RBFOX1-206ENST00000535565 SPINK6Q6UWN8 80 aa13.8□□□□□ -0.2
RBFOX1-206ENST00000535565 KRTAP10-4P60372 401 aaPredicted RBP13.78□□□□□ -0.2
RBFOX1-206ENST00000535565 C14orf132Q9NPU4 83 aa13.78□□□□□ -0.2
RBFOX1-206ENST00000535565 DSCR8Q96T75 97 aa13.77□□□□□ -0.21
RBFOX1-206ENST00000535565 EPPK1P58107 5090 aaKnown RBP13.76□□□□□ -0.21
RBFOX1-206ENST00000535565 Q5VSD8 79 aa13.74□□□□□ -0.21
RBFOX1-206ENST00000535565 ANAPC11Q9NYG5 84 aa13.72□□□□□ -0.21
RBFOX1-206ENST00000535565 J3QR89 54 aa13.71□□□□□ -0.21
RBFOX1-206ENST00000535565 PDE6GP18545 87 aa13.71□□□□□ -0.21
RBFOX1-206ENST00000535565 LOC110117498A0A087WWA1 95 aa13.71□□□□□ -0.22
RBFOX1-206ENST00000535565 TRBV7-4A0A0J9YYF1 115 aa13.71□□□□□ -0.22
RBFOX1-206ENST00000535565 IGLV8-61A0A075B6I0 122 aa13.7□□□□□ -0.22
RBFOX1-206ENST00000535565 IGLV9-49A0A0B4J1Y8 123 aa13.69□□□□□ -0.22
RBFOX1-206ENST00000535565 C9orf153Q5TBE3 101 aa13.68□□□□□ -0.22
RBFOX1-206ENST00000535565 C21orf62-AS1Q17RA5 79 aa13.67□□□□□ -0.22
RBFOX1-206ENST00000535565 FAM229BQ4G0N7 80 aa13.67□□□□□ -0.22
RBFOX1-206ENST00000535565 Q6ZQT0 140 aa13.67□□□□□ -0.22
RBFOX1-206ENST00000535565 HSPG2P98160 4391 aa13.67□□□□□ -0.22
RBFOX1-206ENST00000535565 K7ERU9 68 aa13.66□□□□□ -0.22
RBFOX1-206ENST00000535565 Q6JHZ5 121 aa13.66□□□□□ -0.22
RBFOX1-206ENST00000535565 CCKP06307 115 aa13.65□□□□□ -0.22
RBFOX1-206ENST00000535565 KRTAP1-4P0C5Y4 121 aa13.65□□□□□ -0.22
RBFOX1-206ENST00000535565 Q8N1X5 172 aa13.65□□□□□ -0.22
RBFOX1-206ENST00000535565 RYR1P21817 5038 aa13.64□□□□□ -0.23
RBFOX1-206ENST00000535565 Q8NBF4 154 aa13.64□□□□□ -0.23
RBFOX1-206ENST00000535565 FAT1Q14517 4588 aa13.63□□□□□ -0.23
RBFOX1-206ENST00000535565 MOBPQ13875 183 aa13.62□□□□□ -0.23
RBFOX1-206ENST00000535565 IGFL1Q6UW32 110 aa13.62□□□□□ -0.23
RBFOX1-206ENST00000535565 VPS25Q9BRG1 176 aa13.62□□□□□ -0.23
RBFOX1-206ENST00000535565 CRYGAP11844 174 aa13.61□□□□□ -0.23
RBFOX1-206ENST00000535565 A0A087X002 238 aa13.58□□□□□ -0.23
RBFOX1-206ENST00000535565 KIAA1109Q2LD37 5005 aa13.57□□□□□ -0.24
RBFOX1-206ENST00000535565 FAM240AA0A1B0GVK7 77 aa13.56□□□□□ -0.24
RBFOX1-206ENST00000535565 ACYP1P07311 99 aa13.55□□□□□ -0.24
RBFOX1-206ENST00000535565 SSBP3-AS1Q7Z2R9 100 aa13.55□□□□□ -0.24
RBFOX1-206ENST00000535565 A0A0G2JQZ4 141 aa13.54□□□□□ -0.24
RBFOX1-206ENST00000535565 A0A1W2PNM2 257 aa13.54□□□□□ -0.24
RBFOX1-206ENST00000535565 KRTAP13-2Q52LG2 175 aa13.54□□□□□ -0.24
RBFOX1-206ENST00000535565 KRTAP17-1Q9BYP8 105 aa13.54□□□□□ -0.24
RBFOX1-206ENST00000535565 A0A1B0GW54 56 aa13.5□□□□□ -0.25
RBFOX1-206ENST00000535565 Q6Q795 121 aa13.49□□□□□ -0.25
RBFOX1-206ENST00000535565 PKHD1L1Q86WI1 4243 aa13.48□□□□□ -0.25
RBFOX1-206ENST00000535565 TYMSOSQ8TAI1 123 aa13.48□□□□□ -0.25
RBFOX1-206ENST00000535565 PRR26Q8N8Z3 221 aa13.47□□□□□ -0.25
RBFOX1-206ENST00000535565 LINC00846Q9NV44 126 aa13.44□□□□□ -0.26
RBFOX1-206ENST00000535565 HRCT1Q6UXD1 115 aa13.42□□□□□ -0.26
RBFOX1-206ENST00000535565 CD164Q04900 197 aa13.41□□□□□ -0.26
RBFOX1-206ENST00000535565 TRBV7-7A0A0K0K1E9 115 aa13.41□□□□□ -0.26
RBFOX1-206ENST00000535565 A0A087WSZ3 146 aa13.4□□□□□ -0.26
RBFOX1-206ENST00000535565 UBL5Q9BZL1 73 aa13.4□□□□□ -0.26
RBFOX1-206ENST00000535565 BIRC6Q9NR09 4857 aa13.38□□□□□ -0.27
RBFOX1-206ENST00000535565 C4orf48Q5BLP8 95 aa13.36□□□□□ -0.27
RBFOX1-206ENST00000535565 CDIP1Q9H305 208 aa13.35□□□□□ -0.27
RBFOX1-206ENST00000535565 NREPQ16612 68 aa13.34□□□□□ -0.27
RBFOX1-206ENST00000535565 Q6ZVQ6 151 aa13.33□□□□□ -0.28
RBFOX1-206ENST00000535565 SS18L2Q9UHA2 77 aa13.33□□□□□ -0.28
RBFOX1-206ENST00000535565 LINC00304Q8N9R0 145 aa13.32□□□□□ -0.28
RBFOX1-206ENST00000535565 SPAG11AQ6PDA7 123 aa13.3□□□□□ -0.28
RBFOX1-206ENST00000535565 KRTAP4-5Q9BYR2 181 aa13.29□□□□□ -0.28
RBFOX1-206ENST00000535565 LINC00643Q86TS7 51 aa13.28□□□□□ -0.28
RBFOX1-206ENST00000535565 SPINK1P00995 79 aa13.28□□□□□ -0.28
RBFOX1-206ENST00000535565 LIMD2Q9BT23 127 aa13.25□□□□□ -0.29
RBFOX1-206ENST00000535565 KRTAP10-8P60410 259 aa13.24□□□□□ -0.29
RBFOX1-206ENST00000535565 FLG2Q5D862 2391 aaPredicted RBP13.22□□□□□ -0.29
RBFOX1-206ENST00000535565 RPS29P62273 56 aaKnown RBP13.22□□□□□ -0.29
RBFOX1-206ENST00000535565 Q5XG85 94 aa13.22□□□□□ -0.29
RBFOX1-206ENST00000535565 OXTP01178 125 aa13.21□□□□□ -0.29
RBFOX1-206ENST00000535565 ATP5EP2Q5VTU8 51 aa13.21□□□□□ -0.29
RBFOX1-206ENST00000535565 BPY2O14599 106 aa13.19□□□□□ -0.3
RBFOX1-206ENST00000535565 ASB16-AS1Q495Z4 193 aa13.19□□□□□ -0.3
RBFOX1-206ENST00000535565 SIGMAR1Q99720 223 aa13.17□□□□□ -0.3
RBFOX1-206ENST00000535565 LINC00472Q9H8W2 130 aa13.17□□□□□ -0.3
RBFOX1-206ENST00000535565 CXCL6P80162 114 aa13.16□□□□□ -0.3
RBFOX1-206ENST00000535565 IGKV3D-7A0A0C4DH55 119 aa13.15□□□□□ -0.3
RBFOX1-206ENST00000535565 LRP1Q07954 4544 aaKnown RBP13.14□□□□□ -0.31
RBFOX1-206ENST00000535565 DEFB116Q30KQ4 102 aa13.14□□□□□ -0.31
RBFOX1-206ENST00000535565 HERC2O95714 4834 aa13.14□□□□□ -0.31
RBFOX1-206ENST00000535565 J3KT08 172 aa13.13□□□□□ -0.31
RBFOX1-206ENST00000535565 MT-ATP8P03928 68 aa13.13□□□□□ -0.31
RBFOX1-206ENST00000535565 Q96NJ1 140 aa13.13□□□□□ -0.31
RBFOX1-206ENST00000535565 FAT3Q8TDW7 4589 aa13.11□□□□□ -0.31
RBFOX1-206ENST00000535565 MT1HL1P0DM35 61 aa13.11□□□□□ -0.31
RBFOX1-206ENST00000535565 KRTAP29-1A8MX34 341 aaPredicted RBP13.09□□□□□ -0.31
RBFOX1-206ENST00000535565 IGKV4-1P06312 121 aa13.09□□□□□ -0.31
RBFOX1-206ENST00000535565 TNXBP22105 4242 aa13.08□□□□□ -0.32
RBFOX1-206ENST00000535565 C1orf195Q5TG92 126 aa13.07□□□□□ -0.32
RBFOX1-206ENST00000535565 MYCBP2O75592 4640 aa13.06□□□□□ -0.32
RBFOX1-206ENST00000535565 DSCR10P59022 87 aa13.05□□□□□ -0.32
RBFOX1-206ENST00000535565 IMUPQ9GZP8 106 aa13.03□□□□□ -0.32
RBFOX1-206ENST00000535565 HIST1H4AP62805 103 aaKnown RBP13.03□□□□□ -0.32
RBFOX1-206ENST00000535565 A8MWP4 228 aa13.02□□□□□ -0.33
RBFOX1-206ENST00000535565 NDUFB1O75438 58 aa13.01□□□□□ -0.33
RBFOX1-206ENST00000535565 Q8N9L7 120 aa13□□□□□ -0.33
RBFOX1-206ENST00000535565 K7EQZ3 153 aa12.99□□□□□ -0.33
RBFOX1-206ENST00000535565 ABCA13Q86UQ4 5058 aa12.97□□□□□ -0.33
RBFOX1-206ENST00000535565 J3QL48 77 aa12.95□□□□□ -0.34
RBFOX1-206ENST00000535565 PRR15Q8IV56 129 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms