RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 PCOTHQ58A44 107 aa5.98□□□□□ -1.45
SF3B2-216ENST00000534765 CHCHD10Q8WYQ3 142 aaPredicted RBP5.98□□□□□ -1.45
SF3B2-216ENST00000534765 HECTD4Q9Y4D8 3996 aa5.98□□□□□ -1.45
SF3B2-216ENST00000534765 NDUFB1O75438 58 aa5.97□□□□□ -1.45
SF3B2-216ENST00000534765 Q8IZM0 81 aa5.97□□□□□ -1.45
SF3B2-216ENST00000534765 PRO0255Q9UI72 69 aa5.96□□□□□ -1.46
SF3B2-216ENST00000534765 LINC00167Q96N53 147 aa5.96□□□□□ -1.46
SF3B2-216ENST00000534765 A0A096LNI7 61 aa5.95□□□□□ -1.46
SF3B2-216ENST00000534765 IGKV2D-24A0A075B6R9 120 aa5.94□□□□□ -1.46
SF3B2-216ENST00000534765 DNAH6Q9C0G6 4158 aa5.94□□□□□ -1.46
SF3B2-216ENST00000534765 CASC2Q6XLA1 102 aa5.93□□□□□ -1.46
SF3B2-216ENST00000534765 K7EQZ3 153 aa5.93□□□□□ -1.46
SF3B2-216ENST00000534765 Q8NDZ9 215 aa5.93□□□□□ -1.46
SF3B2-216ENST00000534765 REG3AQ06141 175 aa5.93□□□□□ -1.46
SF3B2-216ENST00000534765 H0Y9P7 68 aa5.92□□□□□ -1.46
SF3B2-216ENST00000534765 H3BQ85 93 aa5.92□□□□□ -1.46
SF3B2-216ENST00000534765 SPART-AS1P0CW21 52 aa5.92□□□□□ -1.46
SF3B2-216ENST00000534765 CAMK2N2Q96S95 79 aa5.92□□□□□ -1.46
SF3B2-216ENST00000534765 Q8N9P0 234 aaPredicted RBP5.91□□□□□ -1.46
SF3B2-216ENST00000534765 C1orf137Q5JT78 98 aa5.9□□□□□ -1.46
SF3B2-216ENST00000534765 KPRPQ5T749 579 aaPredicted RBP5.9□□□□□ -1.47
SF3B2-216ENST00000534765 A0A0G2JQZ4 141 aa5.89□□□□□ -1.47
SF3B2-216ENST00000534765 A0A1W2PNN7 141 aa5.89□□□□□ -1.47
SF3B2-216ENST00000534765 KIAA0087Q14695 138 aa5.89□□□□□ -1.47
SF3B2-216ENST00000534765 LOC101927531A0A1B0GV80 90 aa5.89□□□□□ -1.47
SF3B2-216ENST00000534765 LINC00313P59037 77 aa5.89□□□□□ -1.47
SF3B2-216ENST00000534765 MOBPQ13875 183 aa5.88□□□□□ -1.47
SF3B2-216ENST00000534765 COA5Q86WW8 74 aa5.88□□□□□ -1.47
SF3B2-216ENST00000534765 ZNF706Q9Y5V0 76 aaPredicted RBP5.88□□□□□ -1.47
SF3B2-216ENST00000534765 COX17Q14061 63 aa5.88□□□□□ -1.47
SF3B2-216ENST00000534765 IGKV2-24A0A0C4DH68 120 aa5.88□□□□□ -1.47
SF3B2-216ENST00000534765 RPL37AP8A6NKH3 93 aa5.87□□□□□ -1.47
SF3B2-216ENST00000534765 H0Y9J4 135 aa5.87□□□□□ -1.47
SF3B2-216ENST00000534765 RPL37AP61513 92 aaKnown RBP5.87□□□□□ -1.47
SF3B2-216ENST00000534765 ADM2Q7Z4H4 148 aa5.87□□□□□ -1.47
SF3B2-216ENST00000534765 CYP4F30PQ9H0H9 118 aa5.87□□□□□ -1.47
SF3B2-216ENST00000534765 LINC01554Q52M75 96 aa5.87□□□□□ -1.47
SF3B2-216ENST00000534765 CASC10Q5T4H9 136 aa5.87□□□□□ -1.47
SF3B2-216ENST00000534765 RETNLBQ9BQ08 111 aa5.87□□□□□ -1.47
SF3B2-216ENST00000534765 CDC42SE1Q9NRR8 79 aa5.87□□□□□ -1.47
SF3B2-216ENST00000534765 KRTAP26-1Q6PEX3 210 aa5.87□□□□□ -1.47
SF3B2-216ENST00000534765 SRRM2Q9UQ35 2752 aaKnown RBP5.87□□□□□ -1.47
SF3B2-216ENST00000534765 A0A1B0GUV1 79 aa5.86□□□□□ -1.47
SF3B2-216ENST00000534765 VPREB1P12018 145 aa5.86□□□□□ -1.47
SF3B2-216ENST00000534765 DEFB131BA0A096LNP1 70 aa5.86□□□□□ -1.47
SF3B2-216ENST00000534765 A6NN06 94 aa5.85□□□□□ -1.47
SF3B2-216ENST00000534765 DNAH8Q96JB1 4490 aa5.84□□□□□ -1.47
SF3B2-216ENST00000534765 FAT2Q9NYQ8 4349 aa5.84□□□□□ -1.47
SF3B2-216ENST00000534765 KRTAP1-5Q9BYS1 174 aa5.84□□□□□ -1.47
SF3B2-216ENST00000534765 SPINK7P58062 85 aa5.84□□□□□ -1.47
SF3B2-216ENST00000534765 PRR26Q8N8Z3 221 aa5.84□□□□□ -1.47
SF3B2-216ENST00000534765 PKD1P98161 4303 aa5.84□□□□□ -1.48
SF3B2-216ENST00000534765 LELP1Q5T871 98 aa5.83□□□□□ -1.48
SF3B2-216ENST00000534765 PRR34Q9NV39 138 aa5.83□□□□□ -1.48
SF3B2-216ENST00000534765 DNAH11Q96DT5 4516 aa5.83□□□□□ -1.48
SF3B2-216ENST00000534765 IGLV6-57P01721 117 aa5.83□□□□□ -1.48
SF3B2-216ENST00000534765 PHF5AQ7RTV0 110 aaKnown RBP5.83□□□□□ -1.48
SF3B2-216ENST00000534765 DNAH17Q9UFH2 4485 aa5.83□□□□□ -1.48
SF3B2-216ENST00000534765 A0A087WSZ3 146 aa5.83□□□□□ -1.48
SF3B2-216ENST00000534765 ELOF1P60002 83 aaKnown RBP5.83□□□□□ -1.48
SF3B2-216ENST00000534765 UBE2DNLQ8IWF7 75 aa5.82□□□□□ -1.48
SF3B2-216ENST00000534765 DNAH5Q8TE73 4624 aa5.81□□□□□ -1.48
SF3B2-216ENST00000534765 Q75L30 129 aa5.81□□□□□ -1.48
SF3B2-216ENST00000534765 PKHD1P08F94 4074 aa5.8□□□□□ -1.48
SF3B2-216ENST00000534765 A0A1W2PNM2 257 aa5.8□□□□□ -1.48
SF3B2-216ENST00000534765 C6orf48Q9UBA6 75 aa5.79□□□□□ -1.48
SF3B2-216ENST00000534765 C15orf56Q8N910 161 aa5.79□□□□□ -1.48
SF3B2-216ENST00000534765 DSCR10P59022 87 aa5.78□□□□□ -1.48
SF3B2-216ENST00000534765 SACSQ9NZJ4 4579 aa5.78□□□□□ -1.48
SF3B2-216ENST00000534765 Q8NBF4 154 aa5.78□□□□□ -1.48
SF3B2-216ENST00000534765 KMT2CQ8NEZ4 4911 aaKnown RBP5.77□□□□□ -1.49
SF3B2-216ENST00000534765 C7orf33Q8WU49 177 aa5.77□□□□□ -1.49
SF3B2-216ENST00000534765 H3BNG1 76 aa5.77□□□□□ -1.49
SF3B2-216ENST00000534765 Q8N377 158 aa5.77□□□□□ -1.49
SF3B2-216ENST00000534765 LINC00528Q8N1L1 170 aa5.76□□□□□ -1.49
SF3B2-216ENST00000534765 ALMS1Q8TCU4 4167 aa5.75□□□□□ -1.49
SF3B2-216ENST00000534765 ZCCHC13Q8WW36 166 aaKnown RBP5.75□□□□□ -1.49
SF3B2-216ENST00000534765 IGLV8-61A0A075B6I0 122 aa5.73□□□□□ -1.49
SF3B2-216ENST00000534765 CSAG1Q6PB30 78 aa5.73□□□□□ -1.49
SF3B2-216ENST00000534765 LINC01556Q5JQF7 62 aa5.73□□□□□ -1.49
SF3B2-216ENST00000534765 APLNQ9ULZ1 77 aa5.73□□□□□ -1.49
SF3B2-216ENST00000534765 DNAH10OSP0CZ25 163 aa5.72□□□□□ -1.49
SF3B2-216ENST00000534765 KRTAP7-1Q8IUC3 87 aa5.72□□□□□ -1.49
SF3B2-216ENST00000534765 LINC00476Q8WZB0 136 aa5.71□□□□□ -1.49
SF3B2-216ENST00000534765 CDK2AP2O75956 126 aa5.7□□□□□ -1.5
SF3B2-216ENST00000534765 Q9BRP9 147 aa5.7□□□□□ -1.5
SF3B2-216ENST00000534765 DHRS4-AS1Q9P1J3 65 aa5.7□□□□□ -1.5
SF3B2-216ENST00000534765 KCNQ1DNQ9H478 68 aa5.7□□□□□ -1.5
SF3B2-216ENST00000534765 C1orf134Q5TEV5 83 aa5.69□□□□□ -1.5
SF3B2-216ENST00000534765 FAM168BA1KXE4 195 aa5.68□□□□□ -1.5
SF3B2-216ENST00000534765 SPANXA2-OT1Q8N9U9 137 aa5.68□□□□□ -1.5
SF3B2-216ENST00000534765 FLG2Q5D862 2391 aaPredicted RBP5.68□□□□□ -1.5
SF3B2-216ENST00000534765 LRP1BQ9NZR2 4599 aa5.67□□□□□ -1.5
SF3B2-216ENST00000534765 LCE2DQ5TA82 110 aaPredicted RBP5.67□□□□□ -1.5
SF3B2-216ENST00000534765 A0A1B0GU69 56 aa5.67□□□□□ -1.5
SF3B2-216ENST00000534765 PRLHP81277 87 aa5.67□□□□□ -1.5
SF3B2-216ENST00000534765 LINC01558Q9Y6Z2 57 aa5.66□□□□□ -1.5
SF3B2-216ENST00000534765 RYR3Q15413 4870 aa5.64□□□□□ -1.51
SF3B2-216ENST00000534765 IGLV5-48A0A075B6I7 105 aa5.64□□□□□ -1.51
SF3B2-216ENST00000534765 IGHV6-1A0A0B4J1U7 121 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms