RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 S100PP25815 95 aa1.77□□□□□ -2.13
ECHDC1-223ENST00000534442 AKR1D1P51857 326 aa1.77□□□□□ -2.13
ECHDC1-223ENST00000534442 RHEBQ15382 184 aa1.77□□□□□ -2.13
ECHDC1-223ENST00000534442 LIMD2Q9BT23 127 aa1.77□□□□□ -2.13
ECHDC1-223ENST00000534442 XAGE1AQ9HD64 81 aa1.77□□□□□ -2.13
ECHDC1-223ENST00000534442 MANBALQ9NQG1 85 aa1.77□□□□□ -2.13
ECHDC1-223ENST00000534442 CDC42SE2Q9NRR3 84 aa1.77□□□□□ -2.13
ECHDC1-223ENST00000534442 ARL2-SNX15V9GYD0 113 aa1.77□□□□□ -2.13
ECHDC1-223ENST00000534442 TMEM218A2RU14 115 aa1.76□□□□□ -2.13
ECHDC1-223ENST00000534442 NCR2O95944 276 aa1.76□□□□□ -2.13
ECHDC1-223ENST00000534442 HINT1P49773 126 aaPredicted RBP1.76□□□□□ -2.13
ECHDC1-223ENST00000534442 GNG4P50150 75 aa1.76□□□□□ -2.13
ECHDC1-223ENST00000534442 SERF2P84101 59 aa1.76□□□□□ -2.13
ECHDC1-223ENST00000534442 MRPL54Q6P161 138 aaKnown RBP1.76□□□□□ -2.13
ECHDC1-223ENST00000534442 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
ECHDC1-223ENST00000534442 SVBPQ8N300 66 aa1.76□□□□□ -2.13
ECHDC1-223ENST00000534442 OR10AG1Q8NH19 301 aa1.76□□□□□ -2.13
ECHDC1-223ENST00000534442 BORCS7Q96B45 105 aa1.76□□□□□ -2.13
ECHDC1-223ENST00000534442 AP1S3Q96PC3 154 aa1.76□□□□□ -2.13
ECHDC1-223ENST00000534442 PSMG3Q9BT73 122 aaPredicted RBP1.76□□□□□ -2.13
ECHDC1-223ENST00000534442 IMUPQ9GZP8 106 aa1.76□□□□□ -2.13
ECHDC1-223ENST00000534442 NIT2Q9NQR4 276 aa1.76□□□□□ -2.13
ECHDC1-223ENST00000534442 TMEM167BQ9NRX6 74 aa1.76□□□□□ -2.13
ECHDC1-223ENST00000534442 LEPROTO15243 131 aa1.75□□□□□ -2.13
ECHDC1-223ENST00000534442 PDE6DO43924 150 aa1.75□□□□□ -2.13
ECHDC1-223ENST00000534442 MT-ND4LP03901 98 aa1.75□□□□□ -2.13
ECHDC1-223ENST00000534442 MGPP08493 103 aa1.75□□□□□ -2.13
ECHDC1-223ENST00000534442 SRP19P09132 144 aaKnown RBP1.75□□□□□ -2.13
ECHDC1-223ENST00000534442 NDUFA6P56556 154 aa1.75□□□□□ -2.13
ECHDC1-223ENST00000534442 SPANXN1Q5VSR9 72 aa1.75□□□□□ -2.13
ECHDC1-223ENST00000534442 Q86TA4 180 aa1.75□□□□□ -2.13
ECHDC1-223ENST00000534442 BAGE2Q86Y30 109 aa1.75□□□□□ -2.13
ECHDC1-223ENST00000534442 TMEM126AQ9H061 195 aa1.75□□□□□ -2.13
ECHDC1-223ENST00000534442 SMCO4Q9NRQ5 59 aa1.75□□□□□ -2.13
ECHDC1-223ENST00000534442 TMEM242Q9NWH2 141 aa1.75□□□□□ -2.13
ECHDC1-223ENST00000534442 NAT8Q9UHE5 227 aa1.75□□□□□ -2.13
ECHDC1-223ENST00000534442 TRAV13-1A0A0B4J241 112 aa1.74□□□□□ -2.13
ECHDC1-223ENST00000534442 C7orf77A4D0Y5 90 aa1.74□□□□□ -2.13
ECHDC1-223ENST00000534442 H3BT86 120 aa1.74□□□□□ -2.13
ECHDC1-223ENST00000534442 RPL35P42766 123 aaKnown RBP1.74□□□□□ -2.13
ECHDC1-223ENST00000534442 KRTAP12-1P59990 96 aa1.74□□□□□ -2.13
ECHDC1-223ENST00000534442 C2orf82Q6UX34 121 aa1.74□□□□□ -2.13
ECHDC1-223ENST00000534442 SMIM15Q7Z3B0 74 aa1.74□□□□□ -2.13
ECHDC1-223ENST00000534442 C5orf17Q8NAS9 161 aa1.74□□□□□ -2.13
ECHDC1-223ENST00000534442 MBD3L1Q8WWY6 194 aa1.74□□□□□ -2.13
ECHDC1-223ENST00000534442 TIMM21Q9BVV7 248 aa1.74□□□□□ -2.13
ECHDC1-223ENST00000534442 RNASE7Q9H1E1 156 aaKnown RBP1.74□□□□□ -2.13
ECHDC1-223ENST00000534442 EPDR1Q9UM22 224 aa1.74□□□□□ -2.13
ECHDC1-223ENST00000534442 SYNE1Q8NF91 8797 aaKnown RBP1.74□□□□□ -2.13
ECHDC1-223ENST00000534442 TMEM238C9JI98 176 aa1.73□□□□□ -2.13
ECHDC1-223ENST00000534442 M0R378 163 aa1.73□□□□□ -2.13
ECHDC1-223ENST00000534442 ADCYAP1P18509 176 aa1.73□□□□□ -2.13
ECHDC1-223ENST00000534442 CRIP1P50238 77 aa1.73□□□□□ -2.13
ECHDC1-223ENST00000534442 FOXA3P55318 350 aaPredicted RBP1.73□□□□□ -2.13
ECHDC1-223ENST00000534442 BAGE3Q86Y29 109 aa1.73□□□□□ -2.13
ECHDC1-223ENST00000534442 SEC11CQ9BY50 192 aa1.73□□□□□ -2.13
ECHDC1-223ENST00000534442 TRBV20OR9-2A0A075B6H5 130 aa1.72□□□□□ -2.13
ECHDC1-223ENST00000534442 TRAV7A0A075B6U4 112 aa1.72□□□□□ -2.13
ECHDC1-223ENST00000534442 J3QQQ9 107 aa1.72□□□□□ -2.13
ECHDC1-223ENST00000534442 KRTAP13-4Q3LI77 160 aa1.72□□□□□ -2.13
ECHDC1-223ENST00000534442 BIN3Q9NQY0 253 aa1.72□□□□□ -2.13
ECHDC1-223ENST00000534442 NAT8BQ9UHF3 227 aa1.72□□□□□ -2.13
ECHDC1-223ENST00000534442 A0A1W2PRE2 83 aa1.71□□□□□ -2.14
ECHDC1-223ENST00000534442 TRGC2P03986 189 aa1.71□□□□□ -2.14
ECHDC1-223ENST00000534442 CXCL1P09341 107 aa1.71□□□□□ -2.14
ECHDC1-223ENST00000534442 FABP4P15090 132 aa1.71□□□□□ -2.14
ECHDC1-223ENST00000534442 C9orf153Q5TBE3 101 aa1.71□□□□□ -2.14
ECHDC1-223ENST00000534442 LOC107984156A0A0G2JMH3 177 aa1.7□□□□□ -2.14
ECHDC1-223ENST00000534442 HIGD1CA8MV81 97 aa1.7□□□□□ -2.14
ECHDC1-223ENST00000534442 H7C2G1 150 aa1.7□□□□□ -2.14
ECHDC1-223ENST00000534442 PPBPP02775 128 aa1.7□□□□□ -2.14
ECHDC1-223ENST00000534442 S100A8P05109 93 aa1.7□□□□□ -2.14
ECHDC1-223ENST00000534442 CKS2P33552 79 aa1.7□□□□□ -2.14
ECHDC1-223ENST00000534442 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
ECHDC1-223ENST00000534442 KRTDAPP60985 99 aa1.7□□□□□ -2.14
ECHDC1-223ENST00000534442 HBBP68871 147 aa1.7□□□□□ -2.14
ECHDC1-223ENST00000534442 PMCHL1Q16048 86 aa1.7□□□□□ -2.14
ECHDC1-223ENST00000534442 ARL17AQ8IVW1 177 aa1.7□□□□□ -2.14
ECHDC1-223ENST00000534442 ZFP30Q9Y2G7 519 aa1.7□□□□□ -2.14
ECHDC1-223ENST00000534442 A0A1B0GUT8 65 aa1.69□□□□□ -2.14
ECHDC1-223ENST00000534442 I3L3M4 83 aa1.69□□□□□ -2.14
ECHDC1-223ENST00000534442 TRGC1P0CF51 173 aa1.69□□□□□ -2.14
ECHDC1-223ENST00000534442 FCER1GP30273 86 aa1.69□□□□□ -2.14
ECHDC1-223ENST00000534442 CKS1BP61024 79 aa1.69□□□□□ -2.14
ECHDC1-223ENST00000534442 TMEM258P61165 79 aa1.69□□□□□ -2.14
ECHDC1-223ENST00000534442 KRTAP19-8Q3LI54 63 aa1.69□□□□□ -2.14
ECHDC1-223ENST00000534442 HRCT1Q6UXD1 115 aa1.69□□□□□ -2.14
ECHDC1-223ENST00000534442 KTN1-AS1Q86SY8 53 aa1.69□□□□□ -2.14
ECHDC1-223ENST00000534442 PRELID3AQ96N28 172 aa1.69□□□□□ -2.14
ECHDC1-223ENST00000534442 OSTCQ9NRP0 149 aa1.69□□□□□ -2.14
ECHDC1-223ENST00000534442 V9GYV3 84 aa1.69□□□□□ -2.14
ECHDC1-223ENST00000534442 D6R8Y8 96 aa1.68□□□□□ -2.14
ECHDC1-223ENST00000534442 ATOH7Q8N100 152 aa1.68□□□□□ -2.14
ECHDC1-223ENST00000534442 ANKRD29Q8N6D5 301 aa1.68□□□□□ -2.14
ECHDC1-223ENST00000534442 TCEAL7Q9BRU2 100 aa1.68□□□□□ -2.14
ECHDC1-223ENST00000534442 PRO1933Q9H354 126 aa1.68□□□□□ -2.14
ECHDC1-223ENST00000534442 F2Z2F3 143 aa1.67□□□□□ -2.14
ECHDC1-223ENST00000534442 HIST1H4AP62805 103 aaKnown RBP1.67□□□□□ -2.14
ECHDC1-223ENST00000534442 S100A12P80511 92 aa1.67□□□□□ -2.14
ECHDC1-223ENST00000534442 RPL39LQ96EH5 51 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms