RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 FAM240AA0A1B0GVK7 77 aa6.76□□□□□ -1.33
TRAPPC4-211ENST00000533012 COX7BP24311 80 aa6.76□□□□□ -1.33
TRAPPC4-211ENST00000533012 SIGMAR1Q99720 223 aa6.76□□□□□ -1.33
TRAPPC4-211ENST00000533012 LRP1Q07954 4544 aaKnown RBP6.76□□□□□ -1.33
TRAPPC4-211ENST00000533012 J3QL48 77 aa6.75□□□□□ -1.33
TRAPPC4-211ENST00000533012 C21orf62-AS1Q17RA5 79 aa6.75□□□□□ -1.33
TRAPPC4-211ENST00000533012 TMEM256-PLSCR3K7ERE1 68 aa6.74□□□□□ -1.33
TRAPPC4-211ENST00000533012 SCGB1A1P11684 91 aa6.74□□□□□ -1.33
TRAPPC4-211ENST00000533012 ELOF1P60002 83 aaKnown RBP6.74□□□□□ -1.33
TRAPPC4-211ENST00000533012 Q9BRP9 147 aa6.74□□□□□ -1.33
TRAPPC4-211ENST00000533012 DHRS4-AS1Q9P1J3 65 aa6.74□□□□□ -1.33
TRAPPC4-211ENST00000533012 ZNF706Q9Y5V0 76 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC4-211ENST00000533012 KRTAP1-4P0C5Y4 121 aa6.73□□□□□ -1.33
TRAPPC4-211ENST00000533012 FLG2Q5D862 2391 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC4-211ENST00000533012 TEX49A0A1B0GTD5 131 aa6.72□□□□□ -1.33
TRAPPC4-211ENST00000533012 JMJD7-PLA2G4BH0Y9G9 81 aa6.72□□□□□ -1.33
TRAPPC4-211ENST00000533012 ERC2-IT1O76042 136 aa6.72□□□□□ -1.33
TRAPPC4-211ENST00000533012 FAM218AQ96MZ4 157 aa6.72□□□□□ -1.33
TRAPPC4-211ENST00000533012 hADV29S1A0JD25 119 aa6.71□□□□□ -1.34
TRAPPC4-211ENST00000533012 PRR26Q8N8Z3 221 aa6.71□□□□□ -1.34
TRAPPC4-211ENST00000533012 SPRR4Q96PI1 79 aa6.71□□□□□ -1.34
TRAPPC4-211ENST00000533012 CRYGAP11844 174 aa6.7□□□□□ -1.34
TRAPPC4-211ENST00000533012 KRTAP10-8P60410 259 aa6.7□□□□□ -1.34
TRAPPC4-211ENST00000533012 ANAPC11Q9NYG5 84 aa6.7□□□□□ -1.34
TRAPPC4-211ENST00000533012 FAM229BQ4G0N7 80 aa6.69□□□□□ -1.34
TRAPPC4-211ENST00000533012 GAGE2AQ6NT46 116 aa6.69□□□□□ -1.34
TRAPPC4-211ENST00000533012 LINC00575Q6W349 94 aa6.69□□□□□ -1.34
TRAPPC4-211ENST00000533012 MT1HL1P0DM35 61 aa6.68□□□□□ -1.34
TRAPPC4-211ENST00000533012 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC4-211ENST00000533012 ST20-AS1Q8NBB2 130 aa6.67□□□□□ -1.34
TRAPPC4-211ENST00000533012 A0A087X002 238 aa6.66□□□□□ -1.34
TRAPPC4-211ENST00000533012 PCP4P48539 62 aa6.66□□□□□ -1.34
TRAPPC4-211ENST00000533012 LINC00483Q53H64 154 aa6.66□□□□□ -1.34
TRAPPC4-211ENST00000533012 CDIP1Q9H305 208 aa6.66□□□□□ -1.34
TRAPPC4-211ENST00000533012 TNXBP22105 4242 aa6.65□□□□□ -1.34
TRAPPC4-211ENST00000533012 PDE6GP18545 87 aa6.65□□□□□ -1.34
TRAPPC4-211ENST00000533012 DEFB105AQ8NG35 78 aa6.65□□□□□ -1.34
TRAPPC4-211ENST00000533012 TYMSOSQ8TAI1 123 aa6.65□□□□□ -1.34
TRAPPC4-211ENST00000533012 OBSCN-AS1Q96MR7 158 aa6.65□□□□□ -1.34
TRAPPC4-211ENST00000533012 KRTAP13-2Q52LG2 175 aa6.63□□□□□ -1.35
TRAPPC4-211ENST00000533012 SPRR1BP22528 89 aa6.62□□□□□ -1.35
TRAPPC4-211ENST00000533012 Q6Q795 121 aa6.62□□□□□ -1.35
TRAPPC4-211ENST00000533012 LAMTOR3Q9UHA4 124 aa6.62□□□□□ -1.35
TRAPPC4-211ENST00000533012 IGLV5-48A0A075B6I7 105 aa6.61□□□□□ -1.35
TRAPPC4-211ENST00000533012 RBM3P98179 157 aaKnown RBP6.61□□□□□ -1.35
TRAPPC4-211ENST00000533012 Q6ZQY7 126 aa6.61□□□□□ -1.35
TRAPPC4-211ENST00000533012 LINC00643Q86TS7 51 aa6.61□□□□□ -1.35
TRAPPC4-211ENST00000533012 C3orf22Q8N5N4 141 aa6.61□□□□□ -1.35
TRAPPC4-211ENST00000533012 IMUPQ9GZP8 106 aa6.61□□□□□ -1.35
TRAPPC4-211ENST00000533012 IGLV9-49A0A0B4J1Y8 123 aa6.6□□□□□ -1.35
TRAPPC4-211ENST00000533012 DSCR8Q96T75 97 aa6.6□□□□□ -1.35
TRAPPC4-211ENST00000533012 C14orf132Q9NPU4 83 aa6.6□□□□□ -1.35
TRAPPC4-211ENST00000533012 HERC1Q15751 4861 aa6.59□□□□□ -1.35
TRAPPC4-211ENST00000533012 CCKP06307 115 aa6.59□□□□□ -1.35
TRAPPC4-211ENST00000533012 LINC01547P58512 204 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC4-211ENST00000533012 SSBP3-AS1Q7Z2R9 100 aa6.59□□□□□ -1.35
TRAPPC4-211ENST00000533012 Q8N377 158 aa6.59□□□□□ -1.35
TRAPPC4-211ENST00000533012 MT-ATP8P03928 68 aa6.58□□□□□ -1.36
TRAPPC4-211ENST00000533012 MOBPQ13875 183 aa6.58□□□□□ -1.36
TRAPPC4-211ENST00000533012 DMBT1Q9UGM3 2413 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC4-211ENST00000533012 LOC110117498A0A087WWA1 95 aa6.57□□□□□ -1.36
TRAPPC4-211ENST00000533012 C4orf48Q5BLP8 95 aa6.57□□□□□ -1.36
TRAPPC4-211ENST00000533012 C9orf153Q5TBE3 101 aa6.57□□□□□ -1.36
TRAPPC4-211ENST00000533012 LINC00304Q8N9R0 145 aa6.57□□□□□ -1.36
TRAPPC4-211ENST00000533012 ATP5EP2Q5VTU8 51 aa6.56□□□□□ -1.36
TRAPPC4-211ENST00000533012 SPAG11AQ6PDA7 123 aa6.56□□□□□ -1.36
TRAPPC4-211ENST00000533012 SMIM29Q86T20 159 aa6.56□□□□□ -1.36
TRAPPC4-211ENST00000533012 Q8NBF4 154 aa6.56□□□□□ -1.36
TRAPPC4-211ENST00000533012 TRBV7-7A0A0K0K1E9 115 aa6.55□□□□□ -1.36
TRAPPC4-211ENST00000533012 A0A1B0GV72 72 aa6.55□□□□□ -1.36
TRAPPC4-211ENST00000533012 UBL5Q9BZL1 73 aa6.55□□□□□ -1.36
TRAPPC4-211ENST00000533012 F8WEM9 126 aa6.53□□□□□ -1.36
TRAPPC4-211ENST00000533012 NDUFV3P56181 108 aaKnown RBP6.53□□□□□ -1.36
TRAPPC4-211ENST00000533012 Q6JHZ5 121 aa6.53□□□□□ -1.36
TRAPPC4-211ENST00000533012 A0A1B0GW54 56 aa6.52□□□□□ -1.37
TRAPPC4-211ENST00000533012 Q6ZQT0 140 aa6.52□□□□□ -1.37
TRAPPC4-211ENST00000533012 LCE2BO14633 110 aa6.51□□□□□ -1.37
TRAPPC4-211ENST00000533012 SPINK1P00995 79 aa6.51□□□□□ -1.37
TRAPPC4-211ENST00000533012 TRBV7-4A0A0J9YYF1 115 aa6.49□□□□□ -1.37
TRAPPC4-211ENST00000533012 ANAPC13Q9BS18 74 aa6.48□□□□□ -1.37
TRAPPC4-211ENST00000533012 LINC00846Q9NV44 126 aa6.48□□□□□ -1.37
TRAPPC4-211ENST00000533012 IGLV8-61A0A075B6I0 122 aa6.47□□□□□ -1.37
TRAPPC4-211ENST00000533012 RPS29P62273 56 aaKnown RBP6.46□□□□□ -1.38
TRAPPC4-211ENST00000533012 CD164Q04900 197 aa6.46□□□□□ -1.38
TRAPPC4-211ENST00000533012 HRCT1Q6UXD1 115 aa6.46□□□□□ -1.38
TRAPPC4-211ENST00000533012 HMCN2Q8NDA2 5059 aa6.44□□□□□ -1.38
TRAPPC4-211ENST00000533012 A0A0G2JQZ4 141 aa6.44□□□□□ -1.38
TRAPPC4-211ENST00000533012 IGFL1Q6UW32 110 aa6.44□□□□□ -1.38
TRAPPC4-211ENST00000533012 ATOX1O00244 68 aa6.43□□□□□ -1.38
TRAPPC4-211ENST00000533012 CXCL6P80162 114 aa6.43□□□□□ -1.38
TRAPPC4-211ENST00000533012 PRR4Q16378 134 aa6.43□□□□□ -1.38
TRAPPC4-211ENST00000533012 LIMD2Q9BT23 127 aa6.43□□□□□ -1.38
TRAPPC4-211ENST00000533012 FAM236AA0A1B0GUQ0 79 aa6.42□□□□□ -1.38
TRAPPC4-211ENST00000533012 FAM236BA0A1B0GV22 79 aa6.42□□□□□ -1.38
TRAPPC4-211ENST00000533012 RETNLBQ9BQ08 111 aa6.41□□□□□ -1.38
TRAPPC4-211ENST00000533012 Q6ZVQ6 151 aa6.4□□□□□ -1.38
TRAPPC4-211ENST00000533012 IGKV3D-7A0A0C4DH55 119 aa6.39□□□□□ -1.39
TRAPPC4-211ENST00000533012 HIST1H4AP62805 103 aaKnown RBP6.39□□□□□ -1.39
TRAPPC4-211ENST00000533012 NREPQ16612 68 aa6.39□□□□□ -1.39
TRAPPC4-211ENST00000533012 Q5XG85 94 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms