RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 PCP2Q8IVA1 136 aa9.05□□□□□ -0.96
RPUSD4-207ENST00000532800 SMIM11BQ8TCY0 68 aa9.05□□□□□ -0.96
RPUSD4-207ENST00000532800 A4D1N5 150 aa9.04□□□□□ -0.96
RPUSD4-207ENST00000532800 COX6B2Q6YFQ2 88 aa9.04□□□□□ -0.96
RPUSD4-207ENST00000532800 Q6ZVH6 145 aa9.03□□□□□ -0.96
RPUSD4-207ENST00000532800 COA6Q5JTJ3 125 aaKnown RBP9.02□□□□□ -0.97
RPUSD4-207ENST00000532800 NHP2Q9NX24 153 aaKnown RBP9.02□□□□□ -0.97
RPUSD4-207ENST00000532800 TRAV13-2A0A0B4J235 113 aa9.01□□□□□ -0.97
RPUSD4-207ENST00000532800 C20orf202A1L168 122 aa9.01□□□□□ -0.97
RPUSD4-207ENST00000532800 TCL1BO95988 128 aa9.01□□□□□ -0.97
RPUSD4-207ENST00000532800 SCGB1D1O95968 90 aa8.99□□□□□ -0.97
RPUSD4-207ENST00000532800 F8WEM9 126 aa8.98□□□□□ -0.97
RPUSD4-207ENST00000532800 LINC00575Q6W349 94 aa8.95□□□□□ -0.98
RPUSD4-207ENST00000532800 Q6ZQY7 126 aa8.95□□□□□ -0.98
RPUSD4-207ENST00000532800 H3BS24 57 aa8.94□□□□□ -0.98
RPUSD4-207ENST00000532800 TRBV7-7A0A0K0K1E9 115 aa8.93□□□□□ -0.98
RPUSD4-207ENST00000532800 IGFL1Q6UW32 110 aa8.93□□□□□ -0.98
RPUSD4-207ENST00000532800 CLEC2BQ92478 149 aa8.93□□□□□ -0.98
RPUSD4-207ENST00000532800 VAMP3Q15836 100 aa8.92□□□□□ -0.98
RPUSD4-207ENST00000532800 hADV29S1A0JD25 119 aa8.91□□□□□ -0.98
RPUSD4-207ENST00000532800 Q6JHZ5 121 aa8.91□□□□□ -0.98
RPUSD4-207ENST00000532800 OBSCN-AS1Q96MR7 158 aa8.91□□□□□ -0.98
RPUSD4-207ENST00000532800 OCIAD2Q56VL3 154 aa8.88□□□□□ -0.99
RPUSD4-207ENST00000532800 Q6Q795 121 aa8.88□□□□□ -0.99
RPUSD4-207ENST00000532800 Q75L30 129 aa8.88□□□□□ -0.99
RPUSD4-207ENST00000532800 SNRPEP62304 92 aaKnown RBP8.87□□□□□ -0.99
RPUSD4-207ENST00000532800 ATP11AUNQ6ZP68 121 aa8.86□□□□□ -0.99
RPUSD4-207ENST00000532800 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.84□□□□□ -0.99
RPUSD4-207ENST00000532800 C12orf57Q99622 126 aa8.84□□□□□ -0.99
RPUSD4-207ENST00000532800 H3BUT2 72 aa8.83□□□□□ -1
RPUSD4-207ENST00000532800 LST1O00453 97 aa8.81□□□□□ -1
RPUSD4-207ENST00000532800 HIST3H2BBQ8N257 126 aa8.8□□□□□ -1
RPUSD4-207ENST00000532800 Q96NJ1 140 aa8.8□□□□□ -1
RPUSD4-207ENST00000532800 SNHG12Q9BXW3 62 aa8.8□□□□□ -1
RPUSD4-207ENST00000532800 HSBP1L1C9JCN9 74 aa8.79□□□□□ -1
RPUSD4-207ENST00000532800 PPDPFLQ8WWR9 84 aa8.79□□□□□ -1
RPUSD4-207ENST00000532800 HIST1H2BLQ99880 126 aa8.79□□□□□ -1
RPUSD4-207ENST00000532800 BVES-AS1Q5T3Y7 98 aa8.78□□□□□ -1
RPUSD4-207ENST00000532800 C20orf166-AS1Q96NR2 134 aa8.75□□□□□ -1.01
RPUSD4-207ENST00000532800 HIST1H4GQ99525 98 aa8.75□□□□□ -1.01
RPUSD4-207ENST00000532800 S100A2P29034 98 aa8.74□□□□□ -1.01
RPUSD4-207ENST00000532800 KRTAP9-8Q9BYQ0 159 aa8.73□□□□□ -1.01
RPUSD4-207ENST00000532800 SS18L2Q9UHA2 77 aa8.73□□□□□ -1.01
RPUSD4-207ENST00000532800 A8MUU9 505 aa8.72□□□□□ -1.01
RPUSD4-207ENST00000532800 USH2AO75445 5202 aa8.72□□□□□ -1.01
RPUSD4-207ENST00000532800 FAM218AQ96MZ4 157 aa8.7□□□□□ -1.02
RPUSD4-207ENST00000532800 SSPOA2VEC9 5147 aa8.7□□□□□ -1.02
RPUSD4-207ENST00000532800 A0A087WSZ3 146 aa8.69□□□□□ -1.02
RPUSD4-207ENST00000532800 TEN1Q86WV5 123 aa8.69□□□□□ -1.02
RPUSD4-207ENST00000532800 CFC1P0CG37 223 aa8.68□□□□□ -1.02
RPUSD4-207ENST00000532800 COX8AP10176 69 aa8.68□□□□□ -1.02
RPUSD4-207ENST00000532800 NDUFV3P56181 108 aaKnown RBP8.68□□□□□ -1.02
RPUSD4-207ENST00000532800 DSCR10P59022 87 aa8.67□□□□□ -1.02
RPUSD4-207ENST00000532800 TRBV20-1A0A075B6N2 111 aa8.65□□□□□ -1.02
RPUSD4-207ENST00000532800 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.65□□□□□ -1.02
RPUSD4-207ENST00000532800 RAB37Q96AX2 223 aa8.65□□□□□ -1.02
RPUSD4-207ENST00000532800 KRTAP16-1A8MUX0 517 aa8.62□□□□□ -1.03
RPUSD4-207ENST00000532800 H0YGX0 51 aa8.62□□□□□ -1.03
RPUSD4-207ENST00000532800 H3BMG7 143 aa8.62□□□□□ -1.03
RPUSD4-207ENST00000532800 SIGMAR1Q99720 223 aa8.62□□□□□ -1.03
RPUSD4-207ENST00000532800 A0A0B4J2C4 111 aa8.61□□□□□ -1.03
RPUSD4-207ENST00000532800 KRTAP9-7A8MTY7 169 aa8.61□□□□□ -1.03
RPUSD4-207ENST00000532800 DLEU1O43261 78 aa8.61□□□□□ -1.03
RPUSD4-207ENST00000532800 SNCGO76070 127 aa8.61□□□□□ -1.03
RPUSD4-207ENST00000532800 S100A6P06703 90 aa8.61□□□□□ -1.03
RPUSD4-207ENST00000532800 A0A1W2PNM2 257 aa8.6□□□□□ -1.03
RPUSD4-207ENST00000532800 C14orf144Q96I85 54 aa8.6□□□□□ -1.03
RPUSD4-207ENST00000532800 FABP2P12104 132 aa8.59□□□□□ -1.03
RPUSD4-207ENST00000532800 MT2AP02795 61 aa8.58□□□□□ -1.04
RPUSD4-207ENST00000532800 HIGD1BQ9P298 99 aa8.57□□□□□ -1.04
RPUSD4-207ENST00000532800 FAM236DA0A1B0GTK5 79 aa8.56□□□□□ -1.04
RPUSD4-207ENST00000532800 FAM236CP0DP71 79 aa8.56□□□□□ -1.04
RPUSD4-207ENST00000532800 C2orf91Q6ZV80 131 aa8.56□□□□□ -1.04
RPUSD4-207ENST00000532800 LINC00313P59037 77 aa8.55□□□□□ -1.04
RPUSD4-207ENST00000532800 PAM16Q9Y3D7 125 aa8.55□□□□□ -1.04
RPUSD4-207ENST00000532800 A0A1B0GX51 115 aa8.54□□□□□ -1.04
RPUSD4-207ENST00000532800 IGKV4-1P06312 121 aa8.54□□□□□ -1.04
RPUSD4-207ENST00000532800 NOTCH2NLQ7Z3S9 236 aa8.54□□□□□ -1.04
RPUSD4-207ENST00000532800 A0A1B0GV72 72 aa8.53□□□□□ -1.04
RPUSD4-207ENST00000532800 MT1FP04733 61 aa8.53□□□□□ -1.04
RPUSD4-207ENST00000532800 PCP4P48539 62 aa8.53□□□□□ -1.04
RPUSD4-207ENST00000532800 SPATA45Q537H7 98 aa8.53□□□□□ -1.04
RPUSD4-207ENST00000532800 FCGBPQ9Y6R7 5405 aaPredicted RBP8.53□□□□□ -1.04
RPUSD4-207ENST00000532800 HRES1P13985 223 aa8.52□□□□□ -1.05
RPUSD4-207ENST00000532800 MPLKIPQ8TAP9 179 aa8.52□□□□□ -1.05
RPUSD4-207ENST00000532800 TRIAP1O43715 76 aa8.51□□□□□ -1.05
RPUSD4-207ENST00000532800 CEND1Q8N111 149 aa8.51□□□□□ -1.05
RPUSD4-207ENST00000532800 PRO1854Q9UHT4 67 aa8.51□□□□□ -1.05
RPUSD4-207ENST00000532800 DEFB116Q30KQ4 102 aa8.5□□□□□ -1.05
RPUSD4-207ENST00000532800 TRBV7-4A0A0J9YYF1 115 aa8.49□□□□□ -1.05
RPUSD4-207ENST00000532800 FXYD2P54710 66 aa8.49□□□□□ -1.05
RPUSD4-207ENST00000532800 ANKRD29Q8N6D5 301 aa8.49□□□□□ -1.05
RPUSD4-207ENST00000532800 RBM12B-AS1Q9P1G2 102 aa8.48□□□□□ -1.05
RPUSD4-207ENST00000532800 KRTAP19-1Q8IUB9 90 aa8.46□□□□□ -1.06
RPUSD4-207ENST00000532800 VAMP8Q9BV40 100 aa8.46□□□□□ -1.06
RPUSD4-207ENST00000532800 KRTAP9-3Q9BYQ3 159 aa8.46□□□□□ -1.06
RPUSD4-207ENST00000532800 LINC00472Q9H8W2 130 aa8.46□□□□□ -1.06
RPUSD4-207ENST00000532800 IGHV6-1A0A0B4J1U7 121 aa8.45□□□□□ -1.06
RPUSD4-207ENST00000532800 ORMDL1Q9P0S3 153 aa8.45□□□□□ -1.06
RPUSD4-207ENST00000532800 DNAL4O96015 105 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms