RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PLECQ15149 4684 aaKnown RBP10.75□□□□□ -0.69
BRCA2-204ENST00000530893 FAM236DA0A1B0GTK5 79 aa10.75□□□□□ -0.69
BRCA2-204ENST00000530893 FAM236CP0DP71 79 aa10.75□□□□□ -0.69
BRCA2-204ENST00000530893 CSMD3Q7Z407 3707 aa10.75□□□□□ -0.69
BRCA2-204ENST00000530893 EPM2AB3EWF7 344 aa10.74□□□□□ -0.69
BRCA2-204ENST00000530893 UBE2AP49459 152 aa10.73□□□□□ -0.69
BRCA2-204ENST00000530893 DSCR10P59022 87 aa10.73□□□□□ -0.69
BRCA2-204ENST00000530893 TMEM254Q8TBM7 123 aa10.73□□□□□ -0.69
BRCA2-204ENST00000530893 SNURFQ9Y675 71 aa10.73□□□□□ -0.69
BRCA2-204ENST00000530893 DNAH7Q8WXX0 4024 aa10.72□□□□□ -0.69
BRCA2-204ENST00000530893 KRTAP11-1Q8IUC1 163 aa10.72□□□□□ -0.69
BRCA2-204ENST00000530893 K7EQZ3 153 aa10.67□□□□□ -0.7
BRCA2-204ENST00000530893 ATP5EP56381 51 aaPredicted RBP10.67□□□□□ -0.7
BRCA2-204ENST00000530893 A0A0U1RQV1 116 aa10.65□□□□□ -0.7
BRCA2-204ENST00000530893 SVIPQ8NHG7 77 aa10.65□□□□□ -0.7
BRCA2-204ENST00000530893 TENM2Q9NT68 2774 aa10.65□□□□□ -0.7
BRCA2-204ENST00000530893 A0A087WSZ3 146 aa10.65□□□□□ -0.71
BRCA2-204ENST00000530893 KRTAP13-1Q8IUC0 172 aa10.65□□□□□ -0.71
BRCA2-204ENST00000530893 SPACA4Q8TDM5 124 aa10.65□□□□□ -0.71
BRCA2-204ENST00000530893 SERP1Q9Y6X1 66 aa10.65□□□□□ -0.71
BRCA2-204ENST00000530893 A0A0G2JQZ4 141 aa10.63□□□□□ -0.71
BRCA2-204ENST00000530893 LCE6AA0A183 80 aa10.63□□□□□ -0.71
BRCA2-204ENST00000530893 OXTP01178 125 aa10.63□□□□□ -0.71
BRCA2-204ENST00000530893 VPS13DQ5THJ4 4388 aa10.63□□□□□ -0.71
BRCA2-204ENST00000530893 HCG22E2RYF7 251 aa10.62□□□□□ -0.71
BRCA2-204ENST00000530893 PANO1I0J062 215 aa10.62□□□□□ -0.71
BRCA2-204ENST00000530893 A0A087WTM6 91 aa10.61□□□□□ -0.71
BRCA2-204ENST00000530893 FAM30AQ9NZY2 134 aa10.6□□□□□ -0.71
BRCA2-204ENST00000530893 STARD9Q9P2P6 4700 aa10.6□□□□□ -0.71
BRCA2-204ENST00000530893 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.58□□□□□ -0.72
BRCA2-204ENST00000530893 C5orf47Q569G3 176 aa10.55□□□□□ -0.72
BRCA2-204ENST00000530893 Q6ZR54 194 aa10.55□□□□□ -0.72
BRCA2-204ENST00000530893 PRKDCP78527 4128 aaKnown RBP10.55□□□□□ -0.72
BRCA2-204ENST00000530893 DEFB116Q30KQ4 102 aa10.54□□□□□ -0.72
BRCA2-204ENST00000530893 RTL8CO15255 209 aa10.53□□□□□ -0.72
BRCA2-204ENST00000530893 RPL37AP61513 92 aaKnown RBP10.53□□□□□ -0.72
BRCA2-204ENST00000530893 LINC00472Q9H8W2 130 aa10.53□□□□□ -0.72
BRCA2-204ENST00000530893 LINC00483Q53H64 154 aa10.51□□□□□ -0.73
BRCA2-204ENST00000530893 ZNF706Q9Y5V0 76 aaPredicted RBP10.51□□□□□ -0.73
BRCA2-204ENST00000530893 A8MWP4 228 aa10.5□□□□□ -0.73
BRCA2-204ENST00000530893 PRR15Q8IV56 129 aa10.5□□□□□ -0.73
BRCA2-204ENST00000530893 PLAC8Q9NZF1 115 aa10.5□□□□□ -0.73
BRCA2-204ENST00000530893 ZCCHC13Q8WW36 166 aaKnown RBP10.49□□□□□ -0.73
BRCA2-204ENST00000530893 SRRM2Q9UQ35 2752 aaKnown RBP10.48□□□□□ -0.73
BRCA2-204ENST00000530893 KRTAP29-1A8MX34 341 aaPredicted RBP10.48□□□□□ -0.73
BRCA2-204ENST00000530893 Q5XG85 94 aa10.48□□□□□ -0.73
BRCA2-204ENST00000530893 IGLV5-52A0A0A0MRZ9 124 aa10.48□□□□□ -0.73
BRCA2-204ENST00000530893 WFDC13Q8IUB5 93 aa10.47□□□□□ -0.73
BRCA2-204ENST00000530893 HECTD4Q9Y4D8 3996 aa10.47□□□□□ -0.73
BRCA2-204ENST00000530893 SMIM26A0A096LP01 95 aa10.46□□□□□ -0.74
BRCA2-204ENST00000530893 PSORS1C2Q9UIG4 136 aa10.45□□□□□ -0.74
BRCA2-204ENST00000530893 C1orf134Q5TEV5 83 aa10.45□□□□□ -0.74
BRCA2-204ENST00000530893 CASC2Q6XLA1 102 aa10.45□□□□□ -0.74
BRCA2-204ENST00000530893 DNAH17Q9UFH2 4485 aa10.44□□□□□ -0.74
BRCA2-204ENST00000530893 IGLV9-49A0A0B4J1Y8 123 aa10.43□□□□□ -0.74
BRCA2-204ENST00000530893 DNAH2Q9P225 4427 aa10.42□□□□□ -0.74
BRCA2-204ENST00000530893 FBN3Q75N90 2809 aa10.42□□□□□ -0.74
BRCA2-204ENST00000530893 ZNF861PO60384 105 aa10.42□□□□□ -0.74
BRCA2-204ENST00000530893 MP68P56378 58 aa10.42□□□□□ -0.74
BRCA2-204ENST00000530893 NDUFB1O75438 58 aa10.41□□□□□ -0.74
BRCA2-204ENST00000530893 WWC2-AS2Q96NR7 200 aa10.4□□□□□ -0.74
BRCA2-204ENST00000530893 KMT2AQ03164 3969 aa10.39□□□□□ -0.75
BRCA2-204ENST00000530893 H3BPC8 53 aa10.39□□□□□ -0.75
BRCA2-204ENST00000530893 C4orf26Q17RF5 130 aa10.39□□□□□ -0.75
BRCA2-204ENST00000530893 MEGF8Q7Z7M0 2845 aa10.39□□□□□ -0.75
BRCA2-204ENST00000530893 Q96NJ1 140 aa10.36□□□□□ -0.75
BRCA2-204ENST00000530893 FP248Q71RG6 208 aaPredicted RBP10.35□□□□□ -0.75
BRCA2-204ENST00000530893 MMP24-AS1A0A0U1RRL7 71 aa10.34□□□□□ -0.75
BRCA2-204ENST00000530893 MOBPQ13875 183 aa10.33□□□□□ -0.76
BRCA2-204ENST00000530893 DNAH8Q96JB1 4490 aa10.33□□□□□ -0.76
BRCA2-204ENST00000530893 TRAV22A0A0B4J277 110 aa10.32□□□□□ -0.76
BRCA2-204ENST00000530893 LY6G6CO95867 125 aa10.32□□□□□ -0.76
BRCA2-204ENST00000530893 hDV103S1A0JD37 113 aa10.31□□□□□ -0.76
BRCA2-204ENST00000530893 H0Y9P7 68 aa10.31□□□□□ -0.76
BRCA2-204ENST00000530893 HRCT1Q6UXD1 115 aa10.31□□□□□ -0.76
BRCA2-204ENST00000530893 CYP4F30PQ9H0H9 118 aa10.31□□□□□ -0.76
BRCA2-204ENST00000530893 IGLV7-43P04211 117 aa10.31□□□□□ -0.76
BRCA2-204ENST00000530893 LINC00208Q96KT6 92 aa10.31□□□□□ -0.76
BRCA2-204ENST00000530893 ASB16-AS1Q495Z4 193 aa10.3□□□□□ -0.76
BRCA2-204ENST00000530893 DNAH6Q9C0G6 4158 aa10.3□□□□□ -0.76
BRCA2-204ENST00000530893 TP53AIP1Q9HCN2 124 aa10.28□□□□□ -0.76
BRCA2-204ENST00000530893 FAM229BQ4G0N7 80 aa10.26□□□□□ -0.77
BRCA2-204ENST00000530893 SPANXA2-OT1Q8N9U9 137 aa10.26□□□□□ -0.77
BRCA2-204ENST00000530893 FRAS1Q86XX4 4008 aa10.26□□□□□ -0.77
BRCA2-204ENST00000530893 C1orf64Q8NEQ6 169 aa10.25□□□□□ -0.77
BRCA2-204ENST00000530893 C8orf17Q9NRJ1 99 aa10.25□□□□□ -0.77
BRCA2-204ENST00000530893 A0A1B0GVX0 72 aa10.24□□□□□ -0.77
BRCA2-204ENST00000530893 CDK2AP2O75956 126 aa10.24□□□□□ -0.77
BRCA2-204ENST00000530893 ANAPC11Q9NYG5 84 aa10.24□□□□□ -0.77
BRCA2-204ENST00000530893 TGP01266 2768 aa10.23□□□□□ -0.77
BRCA2-204ENST00000530893 CD164Q04900 197 aa10.23□□□□□ -0.77
BRCA2-204ENST00000530893 SSBP3-AS1Q7Z2R9 100 aa10.2□□□□□ -0.78
BRCA2-204ENST00000530893 CIRBP-AS1Q8TBR5 109 aa10.2□□□□□ -0.78
BRCA2-204ENST00000530893 IGHV6-1A0A0B4J1U7 121 aa10.19□□□□□ -0.78
BRCA2-204ENST00000530893 KRTAP10-2P60368 255 aa10.18□□□□□ -0.78
BRCA2-204ENST00000530893 DNAH5Q8TE73 4624 aa10.17□□□□□ -0.78
BRCA2-204ENST00000530893 Q6ZSA8 131 aa10.16□□□□□ -0.78
BRCA2-204ENST00000530893 MRPL34Q9BQ48 92 aaKnown RBP10.16□□□□□ -0.78
BRCA2-204ENST00000530893 MPLKIPQ8TAP9 179 aa10.15□□□□□ -0.78
BRCA2-204ENST00000530893 DNAH11Q96DT5 4516 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms