RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 SYS1-DBNDD2H3BUS1 97 aa5.96□□□□□ -1.46
CMTM1-211ENST00000528484 IFITM1P13164 125 aa5.96□□□□□ -1.46
CMTM1-211ENST00000528484 VAMP3Q15836 100 aa5.96□□□□□ -1.46
CMTM1-211ENST00000528484 CLEC2BQ92478 149 aa5.96□□□□□ -1.46
CMTM1-211ENST00000528484 TRBV7-7A0A0K0K1E9 115 aa5.95□□□□□ -1.46
CMTM1-211ENST00000528484 Q6ZVH6 145 aa5.95□□□□□ -1.46
CMTM1-211ENST00000528484 Q96NJ1 140 aa5.94□□□□□ -1.46
CMTM1-211ENST00000528484 LST1O00453 97 aa5.93□□□□□ -1.46
CMTM1-211ENST00000528484 PET117Q6UWS5 81 aa5.93□□□□□ -1.46
CMTM1-211ENST00000528484 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
CMTM1-211ENST00000528484 LINC01545Q5VT33 79 aa5.92□□□□□ -1.46
CMTM1-211ENST00000528484 TTTY13Q9BZ97 58 aa5.92□□□□□ -1.46
CMTM1-211ENST00000528484 FAM236DA0A1B0GTK5 79 aa5.91□□□□□ -1.46
CMTM1-211ENST00000528484 FAM236CP0DP71 79 aa5.91□□□□□ -1.46
CMTM1-211ENST00000528484 SMIM11BQ8TCY0 68 aa5.91□□□□□ -1.46
CMTM1-211ENST00000528484 IGFL1Q6UW32 110 aa5.9□□□□□ -1.46
CMTM1-211ENST00000528484 SS18L2Q9UHA2 77 aa5.9□□□□□ -1.46
CMTM1-211ENST00000528484 hADV29S1A0JD25 119 aa5.89□□□□□ -1.47
CMTM1-211ENST00000528484 OCIAD2Q56VL3 154 aa5.89□□□□□ -1.47
CMTM1-211ENST00000528484 Q6ZQY7 126 aa5.89□□□□□ -1.47
CMTM1-211ENST00000528484 MUSTN1Q8IVN3 82 aa5.89□□□□□ -1.47
CMTM1-211ENST00000528484 LINC00846Q9NV44 126 aa5.89□□□□□ -1.47
CMTM1-211ENST00000528484 SCGB1D1O95968 90 aa5.88□□□□□ -1.47
CMTM1-211ENST00000528484 C20orf166-AS1Q96NR2 134 aa5.88□□□□□ -1.47
CMTM1-211ENST00000528484 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
CMTM1-211ENST00000528484 SYNE2Q8WXH0 6885 aaKnown RBP5.87□□□□□ -1.47
CMTM1-211ENST00000528484 LINC00575Q6W349 94 aa5.87□□□□□ -1.47
CMTM1-211ENST00000528484 SNHG12Q9BXW3 62 aa5.87□□□□□ -1.47
CMTM1-211ENST00000528484 KRTAP19-1Q8IUB9 90 aa5.86□□□□□ -1.47
CMTM1-211ENST00000528484 PPDPFLQ8WWR9 84 aa5.86□□□□□ -1.47
CMTM1-211ENST00000528484 A8MUU9 505 aa5.85□□□□□ -1.47
CMTM1-211ENST00000528484 C3orf79P0CE67 100 aa5.84□□□□□ -1.47
CMTM1-211ENST00000528484 KRTDAPP60985 99 aa5.84□□□□□ -1.47
CMTM1-211ENST00000528484 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.84□□□□□ -1.47
CMTM1-211ENST00000528484 RBM12B-AS1Q9P1G2 102 aa5.84□□□□□ -1.47
CMTM1-211ENST00000528484 COLCA2A8K830 154 aa5.83□□□□□ -1.48
CMTM1-211ENST00000528484 MT2AP02795 61 aa5.83□□□□□ -1.48
CMTM1-211ENST00000528484 KRTAP10-10P60014 251 aa5.83□□□□□ -1.48
CMTM1-211ENST00000528484 HIST1H2BKO60814 126 aa5.81□□□□□ -1.48
CMTM1-211ENST00000528484 SNCGO76070 127 aa5.81□□□□□ -1.48
CMTM1-211ENST00000528484 HIST1H2BJP06899 126 aa5.81□□□□□ -1.48
CMTM1-211ENST00000528484 HIST1H2BOP23527 126 aa5.81□□□□□ -1.48
CMTM1-211ENST00000528484 HIST1H2BBP33778 126 aa5.81□□□□□ -1.48
CMTM1-211ENST00000528484 HIST1H2BDP58876 126 aa5.81□□□□□ -1.48
CMTM1-211ENST00000528484 HIST1H2BCP62807 126 aa5.81□□□□□ -1.48
CMTM1-211ENST00000528484 HIST2H2BEQ16778 126 aa5.81□□□□□ -1.48
CMTM1-211ENST00000528484 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.81□□□□□ -1.48
CMTM1-211ENST00000528484 BVES-AS1Q5T3Y7 98 aa5.81□□□□□ -1.48
CMTM1-211ENST00000528484 HIST1H2BHQ93079 126 aa5.81□□□□□ -1.48
CMTM1-211ENST00000528484 HIST1H2BNQ99877 126 aa5.81□□□□□ -1.48
CMTM1-211ENST00000528484 HIST1H2BMQ99879 126 aa5.81□□□□□ -1.48
CMTM1-211ENST00000528484 H3BUT2 72 aa5.8□□□□□ -1.48
CMTM1-211ENST00000528484 C12orf57Q99622 126 aa5.8□□□□□ -1.48
CMTM1-211ENST00000528484 TEN1Q86WV5 123 aa5.79□□□□□ -1.48
CMTM1-211ENST00000528484 MT1FP04733 61 aa5.78□□□□□ -1.48
CMTM1-211ENST00000528484 ATOH7Q8N100 152 aa5.78□□□□□ -1.48
CMTM1-211ENST00000528484 SIGMAR1Q99720 223 aa5.78□□□□□ -1.48
CMTM1-211ENST00000528484 DSCR10P59022 87 aa5.77□□□□□ -1.49
CMTM1-211ENST00000528484 SNRPEP62304 92 aaKnown RBP5.77□□□□□ -1.49
CMTM1-211ENST00000528484 MTURNQ8N3F0 131 aa5.77□□□□□ -1.49
CMTM1-211ENST00000528484 A0A087WSZ3 146 aa5.76□□□□□ -1.49
CMTM1-211ENST00000528484 LINC00313P59037 77 aa5.75□□□□□ -1.49
CMTM1-211ENST00000528484 KRTAP9-3Q9BYQ3 159 aa5.75□□□□□ -1.49
CMTM1-211ENST00000528484 HSBP1L1C9JCN9 74 aa5.73□□□□□ -1.49
CMTM1-211ENST00000528484 NDUFV3P56181 108 aaKnown RBP5.71□□□□□ -1.5
CMTM1-211ENST00000528484 HRES1P13985 223 aa5.7□□□□□ -1.5
CMTM1-211ENST00000528484 COA6Q5JTJ3 125 aaKnown RBP5.7□□□□□ -1.5
CMTM1-211ENST00000528484 H3BMG7 143 aa5.69□□□□□ -1.5
CMTM1-211ENST00000528484 IGKV4-1P06312 121 aa5.69□□□□□ -1.5
CMTM1-211ENST00000528484 MPLKIPQ8TAP9 179 aa5.69□□□□□ -1.5
CMTM1-211ENST00000528484 HIST1H4GQ99525 98 aa5.69□□□□□ -1.5
CMTM1-211ENST00000528484 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
CMTM1-211ENST00000528484 KRTAP16-1A8MUX0 517 aa5.67□□□□□ -1.5
CMTM1-211ENST00000528484 H0YGX0 51 aa5.67□□□□□ -1.5
CMTM1-211ENST00000528484 FABP2P12104 132 aa5.66□□□□□ -1.5
CMTM1-211ENST00000528484 RAB37Q96AX2 223 aa5.66□□□□□ -1.5
CMTM1-211ENST00000528484 NOTCH2NLQ7Z3S9 236 aa5.65□□□□□ -1.5
CMTM1-211ENST00000528484 A8MWP4 228 aa5.64□□□□□ -1.51
CMTM1-211ENST00000528484 IGHV6-1A0A0B4J1U7 121 aa5.63□□□□□ -1.51
CMTM1-211ENST00000528484 A0A1B0GX51 115 aa5.62□□□□□ -1.51
CMTM1-211ENST00000528484 ANKRD29Q8N6D5 301 aa5.62□□□□□ -1.51
CMTM1-211ENST00000528484 TRBV7-4A0A0J9YYF1 115 aa5.61□□□□□ -1.51
CMTM1-211ENST00000528484 A0A1W2PNM2 257 aa5.61□□□□□ -1.51
CMTM1-211ENST00000528484 S100A2P29034 98 aa5.61□□□□□ -1.51
CMTM1-211ENST00000528484 KRTAP6-3Q3LI67 103 aa5.61□□□□□ -1.51
CMTM1-211ENST00000528484 C8orf87E5RJ46 101 aa5.59□□□□□ -1.51
CMTM1-211ENST00000528484 DEFB116Q30KQ4 102 aa5.59□□□□□ -1.51
CMTM1-211ENST00000528484 FAM218AQ96MZ4 157 aa5.59□□□□□ -1.51
CMTM1-211ENST00000528484 H3BQ85 93 aa5.58□□□□□ -1.52
CMTM1-211ENST00000528484 DNAL4O96015 105 aa5.58□□□□□ -1.52
CMTM1-211ENST00000528484 TRACP01848 142 aa5.58□□□□□ -1.52
CMTM1-211ENST00000528484 A0A0B4J2C4 111 aa5.57□□□□□ -1.52
CMTM1-211ENST00000528484 SPINK7P58062 85 aa5.57□□□□□ -1.52
CMTM1-211ENST00000528484 ZCCHC13Q8WW36 166 aaKnown RBP5.57□□□□□ -1.52
CMTM1-211ENST00000528484 A0A1B0GV72 72 aa5.56□□□□□ -1.52
CMTM1-211ENST00000528484 LINC00472Q9H8W2 130 aa5.56□□□□□ -1.52
CMTM1-211ENST00000528484 A0A1B0GVX0 72 aa5.55□□□□□ -1.52
CMTM1-211ENST00000528484 CCKP06307 115 aa5.55□□□□□ -1.52
CMTM1-211ENST00000528484 Q8N9P0 234 aaPredicted RBP5.55□□□□□ -1.52
CMTM1-211ENST00000528484 MUC12Q9UKN1 5478 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms